Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004691.1 Hibiscus syriacus cultivar Beakdansim tig00010526_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73090

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6222--6266
20
2.5
18
80
19
58
24
24
11
40
1.87
6235--6272
20
1.9
20
100
0
76
23
28
10
36
1.88
12555--12682
62
2.1
62
84
0
166
32
14
7
46
1.71
17363--17529
84
2.0
84
84
2
219
26
13
10
49
1.75
18197--18240
2
22.0
2
100
0
88
50
0
0
50
1.00
24820--24878
29
2.0
29
100
0
118
44
15
20
20
1.87
30922--30952
6
5.0
6
96
4
53
3
0
32
64
1.09
41571--41595
3
8.3
3
100
0
50
68
0
0
32
0.90
41712--41744
16
2.1
16
88
11
50
75
6
3
15
1.11
43060--43121
3
20.3
3
80
9
72
66
3
0
30
1.08
43043--43117
33
2.2
33
86
6
98
65
2
2
29
1.20
43064--43142
13
6.3
12
72
20
56
62
2
1
34
1.17
43060--43142
16
4.9
17
77
14
84
62
2
1
33
1.16
43060--43121
19
3.2
19
80
14
74
66
3
0
30
1.08
43212--43271
22
2.6
24
73
10
61
53
6
3
36
1.44
43258--43282
11
2.3
11
100
0
50
44
8
8
40
1.63
43239--43328
38
2.5
35
85
8
110
44
8
4
42
1.56
43239--43368
36
3.6
35
79
12
115
44
7
4
43
1.53
43354--43385
2
16.5
2
93
6
57
50
0
0
50
1.00
43322--43425
52
2.0
52
83
9
131
43
6
3
46
1.48
44153--44971
165
5.0
165
94
1
1417
23
21
25
29
1.99
48316--48360
19
2.4
19
92
3
74
66
8
13
11
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50057--50081
3
8.3
3
100
0
50
68
0
0
32
0.90
50198--50230
16
2.1
16
88
11
50
75
6
3
15
1.11
50179--50230
13
3.9
13
76
19
54
75
5
3
15
1.14
51548--51614
3
22.3
3
79
11
75
65
2
0
31
1.07
51531--51605
33
2.2
33
86
6
98
65
2
2
29
1.20
51548--51632
33
2.5
33
85
11
102
63
2
1
32
1.15
51549--51629
13
5.5
14
76
17
76
62
2
1
33
1.16
51751--51775
11
2.3
11
100
0
50
44
8
8
40
1.63
51728--51864
38
3.6
37
79
14
120
45
7
4
43
1.51
51850--51885
2
18.5
2
94
5
65
50
0
0
50
1.00
51816--51925
56
2.0
56
81
12
129
43
6
3
46
1.46
53531--53627
51
1.9
51
80
4
115
41
3
1
54
1.23
54186--54288
31
3.3
31
75
12
93
53
26
7
12
1.65
58161--58246
44
2.0
44
93
4
147
48
4
2
44
1.36
58165--58242
19
3.8
19
70
18
57
50
2
2
44
1.29
58451--58475
12
2.1
12
100
0
50
32
16
20
32
1.94
58497--58538
15
2.7
16
81
3
59
11
30
28
28
1.92
58866--59016
73
2.0
76
91
7
247
21
25
28
24
1.99
59659--59698
21
1.9
21
85
10
55
30
7
0
62
1.23
59808--59854
14
3.4
13
82
11
58
80
2
2
14
0.89
59778--59857
17
4.8
16
73
14
54
76
2
5
16
1.07
64343--64369
2
13.5
2
100
0
54
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64773--64807
15
2.4
14
90
4
52
48
20
2
28
1.63

Tables:   1

The End!