Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004692.1 Hibiscus syriacus cultivar Beakdansim tig00010529_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91983

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31581--31673
31
3.0
31
96
0
168
23
15
37
23
1.93
31677--31728
22
2.4
22
90
9
81
25
30
30
13
1.94
31774--31861
29
3.0
29
76
0
95
20
29
31
18
1.96
32125--32370
125
2.0
125
90
0
384
29
10
10
49
1.70
33598--33767
83
2.0
83
90
0
268
22
17
14
45
1.84
39617--39783
85
2.0
84
90
1
262
42
14
13
28
1.85
48534--48676
66
2.2
66
87
2
198
25
39
14
20
1.91
52979--53011
3
11.0
3
100
0
66
0
33
0
66
0.92
58723--58802
20
3.8
21
76
14
58
60
3
5
31
1.36
64280--64313
18
1.9
18
88
5
52
64
0
2
32
1.08
66001--66035
18
1.9
18
88
11
54
31
5
20
42
1.75
66140--66284
59
2.4
59
94
1
245
37
10
13
37
1.79
66140--66305
59
2.8
59
88
2
190
40
10
13
36
1.78
86448--86520
28
2.5
28
82
12
87
30
17
28
23
1.97
89275--89303
13
2.1
14
93
6
51
41
24
6
27
1.80

Tables:   1

The End!