Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01004693.1 Hibiscus syriacus cultivar Beakdansim tig00010533_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 2620943
ACGTcount: A:0.33, C:0.18, G:0.17, T:0.32
File 1 of 12
Found at i:12 original size:7 final size:7
Alignment explanation
Indices: 1--14135 Score: 19545
Period size: 7 Copynumber: 2048.4 Consensus size: 7
1 CCCTAAA
1 CCCTAAA
8 CCCTAAA
1 CCCTAAA
15 CCCTAAA
1 CCCTAAA
22 CCCTAAA
1 CCCTAAA
29 CCCTAAA
1 CCCTAAA
36 CCCTAAA
1 CCCTAAA
43 -CCTAAAA
1 CCCT-AAA
50 CCCTAAA
1 CCCTAAA
57 CCCTAAA
1 CCCTAAA
64 CCCTAAA
1 CCCTAAA
71 CCCTAAA
1 CCCTAAA
78 CCCTAAA
1 CCCTAAA
85 CCCTAAAA
1 CCCT-AAA
93 CCCTAAA
1 CCCTAAA
*
100 CCCGAAA
1 CCCTAAA
107 CCCTAAA
1 CCCTAAA
114 CCCTAAA
1 CCCTAAA
121 CCCTAAA
1 CCCTAAA
128 CCCTAAA
1 CCCTAAA
135 CCCTAAA
1 CCCTAAA
142 CCCTAAA
1 CCCTAAA
149 CCCTAAA
1 CCCTAAA
156 CCCTAAA
1 CCCTAAA
163 CCCTAAA
1 CCCTAAA
170 -CCTAAA
1 CCCTAAA
176 CCCTAAA
1 CCCTAAA
183 CCCTAAA
1 CCCTAAA
190 CCCTAAA
1 CCCTAAA
197 -CCTAAA
1 CCCTAAA
203 CCCTAAA
1 CCCTAAA
210 -CCTAAA
1 CCCTAAA
216 CCCTAAAA
1 CCCT-AAA
224 CCCTAAA
1 CCCTAAA
231 CCC--AA
1 CCCTAAA
236 CCCTAAA
1 CCCTAAA
243 CCCTAAA
1 CCCTAAA
250 CCCTAAA
1 CCCTAAA
257 CCCTAAA
1 CCCTAAA
264 CCCTAAA
1 CCCTAAA
271 CCCTAAA
1 CCCTAAA
278 CCCTAAA
1 CCCTAAA
285 CCCTAAA
1 CCCTAAA
292 -CCTAAA
1 CCCTAAA
298 CCCTAAA
1 CCCTAAA
305 CCCTAAA
1 CCCTAAA
312 CCCTAAA
1 CCCTAAA
*
319 CCCTAAC
1 CCCTAAA
326 CCCTAAA
1 CCCTAAA
333 CCCTAAA
1 CCCTAAA
340 -CCTAAA
1 CCCTAAA
346 CCCTAAA
1 CCCTAAA
353 CCCTAAA
1 CCCTAAA
360 -CCTAAA
1 CCCTAAA
366 CCCTAAA
1 CCCTAAA
373 CCCTAAA
1 CCCTAAA
380 CCCT-AA
1 CCCTAAA
386 CCCTAAA
1 CCCTAAA
393 CCCTAAA
1 CCCTAAA
*
400 ACCTAAA
1 CCCTAAA
*
407 CCCGAAA
1 CCCTAAA
414 CCCTAAA
1 CCCTAAA
421 CCCTAAA
1 CCCTAAA
428 CCCTAAA
1 CCCTAAA
435 CCCTAAA
1 CCCTAAA
442 -CCTAAA
1 CCCTAAA
448 CCCTAAA
1 CCCTAAA
455 CCCTAAA
1 CCCTAAA
462 CCCT-AA
1 CCCTAAA
468 CCCTTAAA
1 CCC-TAAA
*
476 CCTATAAA
1 CC-CTAAA
484 CCCTAAA
1 CCCTAAA
491 CCCTAAA
1 CCCTAAA
*
498 CCCGAAA
1 CCCTAAA
505 CCCTAAA
1 CCCTAAA
512 CCCTAAA
1 CCCTAAA
519 CCCTAAA
1 CCCTAAA
526 CCCTAAA
1 CCCTAAA
533 CCCTAAA
1 CCCTAAA
540 -CCTAAA
1 CCCTAAA
546 CCCTAAA
1 CCCTAAA
553 CCCTAAA
1 CCCTAAA
560 CCCTAAA
1 CCCTAAA
567 CCCTAAAA
1 CCCT-AAA
575 CCCTAAA
1 CCCTAAA
582 CCCTAAAA
1 CCCT-AAA
590 CCCTAAA
1 CCCTAAA
597 -CCTAAA
1 CCCTAAA
603 CCCTAAAA
1 CCCT-AAA
611 CCCTAAA
1 CCCTAAA
618 CCCTAAA
1 CCCTAAA
625 CCCTTAAA
1 CCC-TAAA
633 CCCTAAA
1 CCCTAAA
640 CCCTAAA
1 CCCTAAA
647 CCCTAAA
1 CCCTAAA
654 CCCTAAA
1 CCCTAAA
661 CCCTAAA
1 CCCTAAA
668 CCCTAAA
1 CCCTAAA
*
675 CCCGAAA
1 CCCTAAA
682 -CC-AAA
1 CCCTAAA
687 CCCTAAA
1 CCCTAAA
694 CCC-AAA
1 CCCTAAA
700 CCCTAAA
1 CCCTAAA
707 CCCTAAA
1 CCCTAAA
714 CCCTAAA
1 CCCTAAA
721 CCCTAAA
1 CCCTAAA
728 CCCTAAA
1 CCCTAAA
735 CCCTACTAA
1 CCCTA--AA
*
744 ACCTAAA
1 CCCTAAA
751 CCCTAAA
1 CCCTAAA
758 CCCTAAA
1 CCCTAAA
765 CCCTAAA
1 CCCTAAA
772 CCCTAAA
1 CCCTAAA
779 CCCTAAA
1 CCCTAAA
786 -CCTAAA
1 CCCTAAA
792 -CCTAAA
1 CCCTAAA
798 CCCTAAA
1 CCCTAAA
805 CCCTAAA
1 CCCTAAA
812 CCCTAAA
1 CCCTAAA
819 CCCTAAA
1 CCCTAAA
826 -CCTAAA
1 CCCTAAA
832 CCCTAAA
1 CCCTAAA
839 CCCTAAA
1 CCCTAAA
846 CCCTAAA
1 CCCTAAA
853 -CCTAAA
1 CCCTAAA
859 CCCTAAA
1 CCCTAAA
866 CCCTAAA
1 CCCTAAA
873 CCCTAAA
1 CCCTAAA
880 CCCTAAA
1 CCCTAAA
*
887 CCCGAAA
1 CCCTAAA
894 CCCTAAA
1 CCCTAAA
901 CCCTAAA
1 CCCTAAA
908 CCCTAAA
1 CCCTAAA
915 CCCTAAA
1 CCCTAAA
922 CCCTAAA
1 CCCTAAA
929 CCCTAAA
1 CCCTAAA
936 -CCTAAA
1 CCCTAAA
942 -CCTAAA
1 CCCTAAA
948 CCCTAAA
1 CCCTAAA
955 CCCTAAA
1 CCCTAAA
962 CCCT-AA
1 CCCTAAA
*
968 CCCGAAA
1 CCCTAAA
975 CCCTAAA
1 CCCTAAA
982 CCCTAAA
1 CCCTAAA
989 CCCTAAA
1 CCCTAAA
996 CCCTAAA
1 CCCTAAA
1003 CCCTAAA
1 CCCTAAA
1010 -CCTAAA
1 CCCTAAA
1016 CCCTAAA
1 CCCTAAA
1023 CCCTAAAA
1 CCCT-AAA
1031 CCCTAAA
1 CCCTAAA
1038 CCCTAAA
1 CCCTAAA
1045 CCCTAAA
1 CCCTAAA
1052 CCCTAAA
1 CCCTAAA
1059 CCCTAAA
1 CCCTAAA
1066 -CCTAAA
1 CCCTAAA
1072 CCCTAAA
1 CCCTAAA
1079 CCCTAAA
1 CCCTAAA
1086 -CCTAAA
1 CCCTAAA
1092 CCCTAAA
1 CCCTAAA
1099 CCCTAAA
1 CCCTAAA
1106 CCCTAAA
1 CCCTAAA
1113 CCCT-AA
1 CCCTAAA
1119 CCCTAAA
1 CCCTAAA
1126 CCCTAAA
1 CCCTAAA
1133 -CCTAAA
1 CCCTAAA
1139 CCC-AAA
1 CCCTAAA
1145 CCCTAAA
1 CCCTAAA
1152 -CCTAAA
1 CCCTAAA
1158 CCCT-AA
1 CCCTAAA
1164 -CCTAAA
1 CCCTAAA
1170 -CCTAAA
1 CCCTAAA
1176 CCCTAAA
1 CCCTAAA
1183 CCCTAAA
1 CCCTAAA
1190 CCCTAAA
1 CCCTAAA
1197 CCCTAAA
1 CCCTAAA
1204 CCCTAAA
1 CCCTAAA
1211 CCCTAAA
1 CCCTAAA
1218 CCCTAAA
1 CCCTAAA
1225 CCCTAAA
1 CCCTAAA
1232 CCCTAAA
1 CCCTAAA
1239 CCCTAAA
1 CCCTAAA
1246 -CCTAAA
1 CCCTAAA
1252 CCCTAAA
1 CCCTAAA
1259 CCCTAAA
1 CCCTAAA
1266 CCCTAAA
1 CCCTAAA
1273 CCCTAAA
1 CCCTAAA
1280 -CCTAAA
1 CCCTAAA
1286 CCCCTAAA
1 -CCCTAAA
1294 CCC--AA
1 CCCTAAA
1299 CCCTAAA
1 CCCTAAA
1306 --CTAAA
1 CCCTAAA
1311 CCCTAAA
1 CCCTAAA
1318 CCC-AAA
1 CCCTAAA
1324 CCCCTAAA
1 -CCCTAAA
1332 CCCTAAA
1 CCCTAAA
1339 CCCTAAA
1 CCCTAAA
1346 CCCT-AA
1 CCCTAAA
1352 CCCTAAA
1 CCCTAAA
1359 CCCTAAA
1 CCCTAAA
1366 CCCT-AA
1 CCCTAAA
1372 CCCTAAA
1 CCCTAAA
1379 CCCTAAA
1 CCCTAAA
1386 CCC-AAA
1 CCCTAAA
1392 CCCTAAA
1 CCCTAAA
1399 CCCTAAA
1 CCCTAAA
1406 CCCTAAA
1 CCCTAAA
1413 CCCTAAA
1 CCCTAAA
*
1420 CCCGAAA
1 CCCTAAA
1427 CCCTAAA
1 CCCTAAA
1434 CCCTAAA
1 CCCTAAA
1441 -CCTAAA
1 CCCTAAA
1447 -CCTAAA
1 CCCTAAA
1453 CCCTAAA
1 CCCTAAA
1460 CCCTAAA
1 CCCTAAA
1467 CCCTAAA
1 CCCTAAA
1474 CCCTAAA
1 CCCTAAA
1481 CCCTAAA
1 CCCTAAA
1488 CCCTAAA
1 CCCTAAA
1495 CCCT-AA
1 CCCTAAA
1501 CCCTAAA
1 CCCTAAA
1508 CCCTAAA
1 CCCTAAA
1515 CCCT-AA
1 CCCTAAA
1521 CCCT-AA
1 CCCTAAA
1527 CCCTAAA
1 CCCTAAA
1534 -CCTAAA
1 CCCTAAA
1540 CCCTAAAAAA
1 CCCT---AAA
1550 CCCTAAA
1 CCCTAAA
1557 CCCTAAA
1 CCCTAAA
1564 CCCTAAA
1 CCCTAAA
1571 CCCTAAA
1 CCCTAAA
1578 CCCTAAA
1 CCCTAAA
1585 CCCTAAA
1 CCCTAAA
1592 CCCTAAA
1 CCCTAAA
1599 -CCTAAA
1 CCCTAAA
1605 CCCTAAA
1 CCCTAAA
1612 -CCTAAA
1 CCCTAAA
1618 CCCTAAA
1 CCCTAAA
1625 CCCTAAA
1 CCCTAAA
1632 CCCCTAAA
1 -CCCTAAA
1640 CCCTAAA
1 CCCTAAA
1647 -CCTAAA
1 CCCTAAA
1653 CCCTAAA
1 CCCTAAA
1660 CCCTAAA
1 CCCTAAA
1667 CCCT-AA
1 CCCTAAA
*
1673 CCCGAAA
1 CCCTAAA
1680 -CCTAAA
1 CCCTAAA
1686 CCCTAAAA
1 CCCT-AAA
1694 CCCTAAA
1 CCCTAAA
1701 CCCTAAA
1 CCCTAAA
1708 CCCTAAA
1 CCCTAAA
1715 CCC--AA
1 CCCTAAA
*
1720 CCCGAAA
1 CCCTAAA
*
1727 CCCGAAA
1 CCCTAAA
1734 CCCTAAA
1 CCCTAAA
1741 -CCTAAA
1 CCCTAAA
1747 CCCTAAA
1 CCCTAAA
1754 CCCTAAA
1 CCCTAAA
1761 CCCTAAA
1 CCCTAAA
1768 CCCTAAA
1 CCCTAAA
1775 CCCTAAA
1 CCCTAAA
1782 CCCTAAA
1 CCCTAAA
1789 -CCTAAA
1 CCCTAAA
1795 CCCTAAA
1 CCCTAAA
1802 CCCTAAA
1 CCCTAAA
1809 CCCTAAA
1 CCCTAAA
1816 CCCTAAA
1 CCCTAAA
1823 CCCTAAA
1 CCCTAAA
1830 CCCTAAA
1 CCCTAAA
1837 CCCTAAA
1 CCCTAAA
1844 CCCTAAA
1 CCCTAAA
1851 -CCTAAA
1 CCCTAAA
1857 CCCTAAAAA
1 CCCT--AAA
1866 CCCTAAA
1 CCCTAAA
1873 CCCTAAA
1 CCCTAAA
1880 CCCTAAA
1 CCCTAAA
1887 CCCTAAA
1 CCCTAAA
1894 CCCTAAA
1 CCCTAAA
1901 CCCTAAA
1 CCCTAAA
1908 CCCTAAA
1 CCCTAAA
1915 CCCTAAA
1 CCCTAAA
1922 CCCTAAAA
1 CCCT-AAA
1930 CCCTAAA
1 CCCTAAA
1937 CCC-AAA
1 CCCTAAA
1943 CCCTAAA
1 CCCTAAA
1950 CCCTAAA
1 CCCTAAA
1957 CCCTAAA
1 CCCTAAA
1964 CCCTAAA
1 CCCTAAA
1971 CCCT-AA
1 CCCTAAA
1977 CCCTAAA
1 CCCTAAA
1984 CCCTAAA
1 CCCTAAA
1991 CCCTAAA
1 CCCTAAA
1998 CCCTAAA
1 CCCTAAA
2005 CCCTAAA
1 CCCTAAA
2012 -CCTAAA
1 CCCTAAA
2018 CCCT-AA
1 CCCTAAA
2024 CCCTAAA
1 CCCTAAA
2031 CCCTAAA
1 CCCTAAA
2038 CCCTAAA
1 CCCTAAA
2045 CCCTAAA
1 CCCTAAA
2052 -CCTAAA
1 CCCTAAA
2058 CCCTAAA
1 CCCTAAA
2065 CCCTAAA
1 CCCTAAA
2072 CCCTAAAAA
1 CCCT--AAA
2081 CCCTAAA
1 CCCTAAA
2088 CCCTAAA
1 CCCTAAA
2095 -CCTAAA
1 CCCTAAA
2101 CCCTAAA
1 CCCTAAA
2108 CCCTAAAA
1 CCCT-AAA
2116 CCCTAAA
1 CCCTAAA
2123 CCCTAAA
1 CCCTAAA
2130 CCCTAAA
1 CCCTAAA
2137 CCCTAAA
1 CCCTAAA
2144 CCCTAAA
1 CCCTAAA
2151 CCCTAAA
1 CCCTAAA
2158 -CCTAAA
1 CCCTAAA
2164 CCCTAAA
1 CCCTAAA
2171 CCCTAAA
1 CCCTAAA
2178 -CCTAAA
1 CCCTAAA
2184 CCCTAAA
1 CCCTAAA
2191 CCCTAAA
1 CCCTAAA
2198 CCCTAAAA
1 CCCT-AAA
2206 CCCTAAA
1 CCCTAAA
2213 CCCT---
1 CCCTAAA
2217 CCCTAAA
1 CCCTAAA
2224 CCCTAAA
1 CCCTAAA
2231 CCCTAAA
1 CCCTAAA
2238 CCCTAAA
1 CCCTAAA
2245 CCCTAAA
1 CCCTAAA
2252 CCCTAAA
1 CCCTAAA
2259 CCCTAAA
1 CCCTAAA
2266 CCCTAAA
1 CCCTAAA
2273 CCCTAAA
1 CCCTAAA
2280 CCCT-AA
1 CCCTAAA
2286 CCCT-AA
1 CCCTAAA
2292 CCCTAAA
1 CCCTAAA
2299 CCCTAAA
1 CCCTAAA
2306 -CCTAAA
1 CCCTAAA
2312 CCCT-AA
1 CCCTAAA
2318 CCCTAAA
1 CCCTAAA
2325 CCCTAAA
1 CCCTAAA
2332 CCCTAAA
1 CCCTAAA
2339 CCCTAAA
1 CCCTAAA
2346 CCCTAAA
1 CCCTAAA
*
2353 -ACT-AA
1 CCCTAAA
2358 CCCTAAAA
1 CCCT-AAA
2366 CCCTAAA
1 CCCTAAA
2373 CCCTAAA
1 CCCTAAA
2380 CCCT-AA
1 CCCTAAA
2386 CCCTAAA
1 CCCTAAA
2393 -CCTAAA
1 CCCTAAA
2399 CCCTAAA
1 CCCTAAA
2406 CCCTAAA
1 CCCTAAA
2413 CCCTAAA
1 CCCTAAA
2420 CCCTAAAA
1 CCCT-AAA
2428 CCCTAAA
1 CCCTAAA
2435 CCCTAAA
1 CCCTAAA
2442 CCCTAAA
1 CCCTAAA
2449 CCCTAAA
1 CCCTAAA
2456 CCCTAAA
1 CCCTAAA
2463 CCCT-AA
1 CCCTAAA
2469 CCCTAAA
1 CCCTAAA
2476 CCCTAAA
1 CCCTAAA
2483 CCCTAAA
1 CCCTAAA
2490 CCCTAAA
1 CCCTAAA
2497 -CCTAAA
1 CCCTAAA
2503 CCCTAAA
1 CCCTAAA
2510 CCCTAAA
1 CCCTAAA
2517 -CCTAAA
1 CCCTAAA
2523 CCCTAAA
1 CCCTAAA
2530 CCCTAAA
1 CCCTAAA
2537 CCCTAAA
1 CCCTAAA
2544 CCCTAAA
1 CCCTAAA
2551 CCCTAAA
1 CCCTAAA
2558 CCCTAAA
1 CCCTAAA
2565 CCCTAAA
1 CCCTAAA
2572 CCCTAAA
1 CCCTAAA
2579 CCCTAAA
1 CCCTAAA
2586 CCCTAAA
1 CCCTAAA
2593 CCCTAAA
1 CCCTAAA
2600 CCCTAAAA
1 CCCT-AAA
2608 CCCTAAA
1 CCCTAAA
2615 CCCCCTAAA
1 --CCCTAAA
2624 CCCTAAA
1 CCCTAAA
2631 CCCTAAA
1 CCCTAAA
2638 CCCTAAA
1 CCCTAAA
2645 CCCTAAA
1 CCCTAAA
2652 CCCT-AA
1 CCCTAAA
2658 CCCTAAA
1 CCCTAAA
2665 CCCTAAA
1 CCCTAAA
2672 CCCTAAA
1 CCCTAAA
2679 CCCTAAA
1 CCCTAAA
2686 CCC-AAA
1 CCCTAAA
2692 CCCTAAA
1 CCCTAAA
2699 CCCTAAA
1 CCCTAAA
2706 CCCTAAA
1 CCCTAAA
2713 CCCTAAA
1 CCCTAAA
2720 CCCTAAAAAA
1 CCCT---AAA
2730 CCCTAAA
1 CCCTAAA
2737 CCCTAAA
1 CCCTAAA
2744 CCCTAAA
1 CCCTAAA
2751 CCCTAAA
1 CCCTAAA
2758 CCCTAAA
1 CCCTAAA
2765 CCCTAAA
1 CCCTAAA
2772 CCCTAAA
1 CCCTAAA
2779 CCCTAAA
1 CCCTAAA
2786 CCCTAAA
1 CCCTAAA
2793 CCCTAAA
1 CCCTAAA
2800 CCCTAAA
1 CCCTAAA
2807 -CCTAAA
1 CCCTAAA
2813 CCCTAAA
1 CCCTAAA
2820 CCCTAAA
1 CCCTAAA
2827 CCCTAAA
1 CCCTAAA
2834 CCC--AA
1 CCCTAAA
2839 CCCTAAA
1 CCCTAAA
2846 CCCTAAA
1 CCCTAAA
2853 CCCTAAA
1 CCCTAAA
2860 CCCTAAA
1 CCCTAAA
2867 CCCTAAA
1 CCCTAAA
2874 CCCTAAA
1 CCCTAAA
2881 CCCTAAA
1 CCCTAAA
2888 CCCTAAA
1 CCCTAAA
2895 -CCTAAA
1 CCCTAAA
2901 CCCTAAA
1 CCCTAAA
2908 CCCTAAA
1 CCCTAAA
2915 CCCTAAA
1 CCCTAAA
2922 CCCTAAA
1 CCCTAAA
2929 CCCTAAA
1 CCCTAAA
2936 -CCTAAA
1 CCCTAAA
2942 CCCTAAA
1 CCCTAAA
2949 CCCTAAA
1 CCCTAAA
2956 -CCTAAA
1 CCCTAAA
2962 CCCTAAA
1 CCCTAAA
2969 CCCTAAA
1 CCCTAAA
2976 CCCTAAA
1 CCCTAAA
2983 CCCTAAA
1 CCCTAAA
2990 CCCTAAA
1 CCCTAAA
2997 CCCTAAA
1 CCCTAAA
3004 -CCTAAA
1 CCCTAAA
3010 CCCTAAA
1 CCCTAAA
3017 CCCTAAA
1 CCCTAAA
3024 CCCTAAA
1 CCCTAAA
3031 CCCTAAA
1 CCCTAAA
3038 CCCTAAA
1 CCCTAAA
3045 CCCT-AA
1 CCCTAAA
3051 CCCTAAA
1 CCCTAAA
3058 CCCTAAA
1 CCCTAAA
3065 CCCT-AA
1 CCCTAAA
3071 CCCTAAA
1 CCCTAAA
3078 CCCTAAA
1 CCCTAAA
3085 CCCTAAA
1 CCCTAAA
3092 CCCTAAA
1 CCCTAAA
3099 CCCTAAAA
1 CCCT-AAA
3107 CCCTAAA
1 CCCTAAA
3114 CCCTAAA
1 CCCTAAA
3121 CCCTAAAA
1 CCCT-AAA
3129 CCCTAAA
1 CCCTAAA
3136 CCCTAAA
1 CCCTAAA
3143 CCCTAAA
1 CCCTAAA
3150 CCCTAAA
1 CCCTAAA
3157 CCCTAAA
1 CCCTAAA
3164 CCCTAAA
1 CCCTAAA
3171 CCCTAAA
1 CCCTAAA
3178 CCCTAAA
1 CCCTAAA
3185 CCCTAAA
1 CCCTAAA
3192 -CCTAAA
1 CCCTAAA
3198 CCCTAAA
1 CCCTAAA
3205 CCCTAAA
1 CCCTAAA
3212 CCCTAAA
1 CCCTAAA
3219 CCCTAAA
1 CCCTAAA
3226 CCCTAAA
1 CCCTAAA
3233 CCCTAAA
1 CCCTAAA
3240 CCCTAAA
1 CCCTAAA
3247 CCCT-AA
1 CCCTAAA
3253 -CCTAAA
1 CCCTAAA
3259 CCCTAAAA
1 CCCT-AAA
3267 CCCTAAAAA
1 CCCT--AAA
3276 CCCTAAA
1 CCCTAAA
3283 CCCTAAA
1 CCCTAAA
3290 CCCTAAA
1 CCCTAAA
3297 CCCTAAA
1 CCCTAAA
3304 CCCTAAAA
1 CCCT-AAA
3312 CCCTAAA
1 CCCTAAA
3319 CCCTAAA
1 CCCTAAA
3326 CCCTAAA
1 CCCTAAA
3333 -CCTAAA
1 CCCTAAA
3339 CCCTAAA
1 CCCTAAA
3346 CCCT-AA
1 CCCTAAA
3352 CCCTAAA
1 CCCTAAA
3359 CCCTAAA
1 CCCTAAA
3366 CCCTAAA
1 CCCTAAA
3373 CCCTAAA
1 CCCTAAA
3380 CCCTAAA
1 CCCTAAA
*
3387 ACCTAAA
1 CCCTAAA
3394 CCCTAAAA
1 CCCT-AAA
3402 CCCTAAA
1 CCCTAAA
3409 CCCTAAA
1 CCCTAAA
3416 CCCTAAA
1 CCCTAAA
3423 CCCTAAA
1 CCCTAAA
3430 CCCT-AA
1 CCCTAAA
3436 CCCTAAA
1 CCCTAAA
3443 CCCTAAA
1 CCCTAAA
3450 CCCTAAA
1 CCCTAAA
3457 -CCT-AA
1 CCCTAAA
*
3462 CCCTCAA
1 CCCTAAA
3469 CCCTAAA
1 CCCTAAA
3476 CCCTAAA
1 CCCTAAA
3483 CCCTAAA
1 CCCTAAA
3490 CCCT-AA
1 CCCTAAA
3496 CCCTAAA
1 CCCTAAA
3503 CCCTAAA
1 CCCTAAA
3510 CCCTAAACA
1 CCCT-AA-A
3519 CCCTAAA
1 CCCTAAA
3526 CCCTAAA
1 CCCTAAA
3533 CCCT-AA
1 CCCTAAA
3539 CCCTAAA
1 CCCTAAA
3546 CCCTAAA
1 CCCTAAA
*
3553 CCCAAAA
1 CCCTAAA
3560 CCCTAAA
1 CCCTAAA
3567 CCCTAAA
1 CCCTAAA
3574 CCC--AA
1 CCCTAAA
3579 CCCTAAAA
1 CCCT-AAA
3587 CCCTAAA
1 CCCTAAA
3594 CCCTAAA
1 CCCTAAA
3601 CCCT-AA
1 CCCTAAA
3607 CCCTAAA
1 CCCTAAA
3614 CCCT-AA
1 CCCTAAA
3620 CCCTAAA
1 CCCTAAA
3627 CCCTAAA
1 CCCTAAA
3634 CCCTAAA
1 CCCTAAA
3641 CCCTAAA
1 CCCTAAA
3648 -CCTAAA
1 CCCTAAA
3654 CCCTAAA
1 CCCTAAA
3661 CCCTAAA
1 CCCTAAA
3668 CCCT-AA
1 CCCTAAA
3674 CCC-AAA
1 CCCTAAA
3680 -CCTAAA
1 CCCTAAA
3686 CCCCTAAA
1 -CCCTAAA
3694 CCCTAAA
1 CCCTAAA
3701 -CCTAAA
1 CCCTAAA
3707 CCCCTAAA
1 -CCCTAAA
3715 CCCTAAAA
1 CCCT-AAA
3723 CCCT-AA
1 CCCTAAA
3729 CCCTAAA
1 CCCTAAA
3736 CCCTAAA
1 CCCTAAA
3743 CCCTAAA
1 CCCTAAA
3750 CCCTAAA
1 CCCTAAA
3757 CCCTAAAA
1 CCCT-AAA
3765 CCCTAAA
1 CCCTAAA
3772 CCCTAAA
1 CCCTAAA
3779 CCCTAAA
1 CCCTAAA
3786 CCCTAAA
1 CCCTAAA
3793 CCCTAAA
1 CCCTAAA
3800 CCCTAAA
1 CCCTAAA
3807 CCCTAAA
1 CCCTAAA
3814 --CTAAA
1 CCCTAAA
3819 CCCTAAA
1 CCCTAAA
3826 CCCTAAA
1 CCCTAAA
3833 CCCTAAA
1 CCCTAAA
3840 CCCTAAA
1 CCCTAAA
3847 CCCTAAAA
1 CCCT-AAA
3855 CCCCTAAA
1 -CCCTAAA
3863 CCCTAAA
1 CCCTAAA
3870 CCCTAAA
1 CCCTAAA
3877 CCCTAAA
1 CCCTAAA
3884 CCCTAAA
1 CCCTAAA
3891 CCCTAAA
1 CCCTAAA
3898 CCCTAAA
1 CCCTAAA
3905 CCCTAAA
1 CCCTAAA
3912 CCCTAAA
1 CCCTAAA
3919 CCCTAAA
1 CCCTAAA
3926 CCCTAAA
1 CCCTAAA
3933 CCCTAAA
1 CCCTAAA
3940 CCCTAAA
1 CCCTAAA
3947 CCCTAAA
1 CCCTAAA
3954 CCCTAAA
1 CCCTAAA
3961 CCCTAAA
1 CCCTAAA
3968 CCCTAAA
1 CCCTAAA
*
3975 ACCTAAAA
1 CCCT-AAA
3983 CCCTAAA
1 CCCTAAA
3990 CCCTAAA
1 CCCTAAA
3997 CCCTAAA
1 CCCTAAA
4004 CCCTAAA
1 CCCTAAA
4011 CCCTAAA
1 CCCTAAA
4018 CCCTAAA
1 CCCTAAA
4025 CCCTAAA
1 CCCTAAA
4032 CCCTAAA
1 CCCTAAA
4039 CCCTAAA
1 CCCTAAA
4046 CCCTAAA
1 CCCTAAA
4053 CCCTAAA
1 CCCTAAA
4060 CCCTAAA
1 CCCTAAA
4067 CCCTAAA
1 CCCTAAA
4074 CCCTAAA
1 CCCTAAA
4081 CCCT-AA
1 CCCTAAA
4087 -CCTAAA
1 CCCTAAA
4093 CCCTAAA
1 CCCTAAA
4100 CCCTAAA
1 CCCTAAA
4107 CCCTAAA
1 CCCTAAA
4114 CCCTAAA
1 CCCTAAA
4121 CCCTAAA
1 CCCTAAA
4128 CCCTAAA
1 CCCTAAA
4135 CCCTAAA
1 CCCTAAA
4142 -CCTAAA
1 CCCTAAA
4148 CCCTAAA
1 CCCTAAA
4155 CCCTAAA
1 CCCTAAA
4162 CCCTAAA
1 CCCTAAA
4169 CCCTAAA
1 CCCTAAA
4176 CCCTAAA
1 CCCTAAA
4183 CCCTAAA
1 CCCTAAA
4190 CCCTAAA
1 CCCTAAA
4197 CCCTAAA
1 CCCTAAA
4204 CCCTAAA
1 CCCTAAA
4211 CCCTAAA
1 CCCTAAA
4218 CCCTAAA
1 CCCTAAA
4225 CCCTAAA
1 CCCTAAA
4232 CCCT-AA
1 CCCTAAA
4238 CCCTAAA
1 CCCTAAA
4245 CCCTAAA
1 CCCTAAA
4252 CCCTAAA
1 CCCTAAA
4259 CCCTAAA
1 CCCTAAA
4266 CCCTAAA
1 CCCTAAA
4273 CCCTAAA
1 CCCTAAA
4280 CCCTAAA
1 CCCTAAA
4287 CCCTAAA
1 CCCTAAA
4294 CCCTAAAA
1 CCCT-AAA
4302 CCCTAAA
1 CCCTAAA
4309 -CCTAAA
1 CCCTAAA
4315 CCCTAAA
1 CCCTAAA
4322 CCCTAAA
1 CCCTAAA
4329 CCCTAAA
1 CCCTAAA
4336 CCCTAAA
1 CCCTAAA
4343 CCCTAAA
1 CCCTAAA
4350 CCCTAAA
1 CCCTAAA
4357 CCCTAAA
1 CCCTAAA
4364 CCCT-AA
1 CCCTAAA
4370 CCCTAAA
1 CCCTAAA
4377 -CCTAAA
1 CCCTAAA
4383 CCCTAAA
1 CCCTAAA
4390 CCCTAAA
1 CCCTAAA
4397 CCCTAAA
1 CCCTAAA
4404 CCCTAAA
1 CCCTAAA
4411 CCCTAAA
1 CCCTAAA
4418 -CCTAAA
1 CCCTAAA
4424 CCCTAAA
1 CCCTAAA
4431 CCCTAAA
1 CCCTAAA
4438 CCCTAAA
1 CCCTAAA
4445 CCCTAAA
1 CCCTAAA
4452 CCCTAAA
1 CCCTAAA
4459 CCCCTAAA
1 -CCCTAAA
4467 -CCTAAA
1 CCCTAAA
4473 CCCTAAA
1 CCCTAAA
4480 -CCTAAA
1 CCCTAAA
4486 CCCTAAA
1 CCCTAAA
4493 CCCTAAA
1 CCCTAAA
4500 CCCTAAA
1 CCCTAAA
4507 -CCTAAA
1 CCCTAAA
4513 CCCTAAA
1 CCCTAAA
4520 CCCTAAA
1 CCCTAAA
4527 CCCTAAA
1 CCCTAAA
4534 CCCTAAA
1 CCCTAAA
4541 CCCTAAA
1 CCCTAAA
4548 CCCTAAA
1 CCCTAAA
4555 CCCTAAA
1 CCCTAAA
4562 -CCTAAA
1 CCCTAAA
4568 CCCTAAA
1 CCCTAAA
4575 CCCTAAA
1 CCCTAAA
4582 CCCTAAA
1 CCCTAAA
4589 CCCTAAA
1 CCCTAAA
4596 -CCTAAA
1 CCCTAAA
4602 CCCTAAA
1 CCCTAAA
4609 CCCTAAA
1 CCCTAAA
4616 CCCTAAA
1 CCCTAAA
4623 CCCTAAA
1 CCCTAAA
4630 CCCTAAA
1 CCCTAAA
4637 CCCTAAA
1 CCCTAAA
4644 CCCT-AA
1 CCCTAAA
4650 CCCTAAA
1 CCCTAAA
4657 CCCT-AA
1 CCCTAAA
4663 CCCTAAA
1 CCCTAAA
4670 CCCTAAA
1 CCCTAAA
4677 CCCTAAA
1 CCCTAAA
4684 CCCT-AA
1 CCCTAAA
4690 CCCTAAA
1 CCCTAAA
*
4697 ACCT-AA
1 CCCTAAA
4703 CCCTAAA
1 CCCTAAA
4710 CCCTAAA
1 CCCTAAA
4717 -CCTAAA
1 CCCTAAA
4723 CCCT-AA
1 CCCTAAA
4729 CCCTAAA
1 CCCTAAA
4736 CCCTAAA
1 CCCTAAA
*
4743 CCCTAGA
1 CCCTAAA
*
4750 CCCTAAC
1 CCCTAAA
4757 CCCTAAA
1 CCCTAAA
4764 CCCTAAA
1 CCCTAAA
4771 CCCT-AA
1 CCCTAAA
4777 CCCTAAA
1 CCCTAAA
4784 CCCTAAA
1 CCCTAAA
4791 CCCT-AA
1 CCCTAAA
4797 CCCTAAA
1 CCCTAAA
4804 CCCTAAA
1 CCCTAAA
4811 CCCT-AA
1 CCCTAAA
4817 CCCTAAGA
1 CCCTAA-A
4825 CCCTAAA
1 CCCTAAA
4832 CCCTAAA
1 CCCTAAA
4839 CCCTAAA
1 CCCTAAA
4846 CCCTAAA
1 CCCTAAA
*
4853 CCCTAGA
1 CCCTAAA
*
4860 CCCTAGA
1 CCCTAAA
4867 CCCT-AA
1 CCCTAAA
*
4873 CCCTAGA
1 CCCTAAA
*
4880 -CCTAGA
1 CCCTAAA
*
4886 -CCTAGA
1 CCCTAAA
*
4892 CCCTAGA
1 CCCTAAA
*
4899 CCCTAGA
1 CCCTAAA
*
4906 CCCTAGA
1 CCCTAAA
*
4913 CCCTAGA
1 CCCTAAA
4920 CCCTAAA
1 CCCTAAA
*
4927 -CCTAGA
1 CCCTAAA
*
4933 CCCTAGA
1 CCCTAAA
*
4940 CCCTAGA
1 CCCTAAA
*
4947 CCCTAGACC
1 CCCTA-A-A
*
4956 CCCTAGA
1 CCCTAAA
*
4963 CCCTAGA
1 CCCTAAA
*
4970 CCCTAGA
1 CCCTAAA
*
4977 -CCTAGA
1 CCCTAAA
4983 CCCTAGAGA
1 CCCTA-A-A
*
4992 CCCTAGA
1 CCCTAAA
*
4999 CCCTAGA
1 CCCTAAA
5006 CCCTAGAA
1 CCCTA-AA
*
5014 CCCTAGA
1 CCCTAAA
5021 CCCT--A
1 CCCTAAA
*
5026 CCCTAGA
1 CCCTAAA
*
5033 CCCTAGA
1 CCCTAAA
5040 CCCTAAAGA
1 CCCT-AA-A
*
5049 CCCTAGA
1 CCCTAAA
*
5056 CCCTAGA
1 CCCTAAA
*
5063 CCCTAGA
1 CCCTAAA
*
5070 -CCTAGA
1 CCCTAAA
*
5076 CCCTAGA
1 CCCTAAA
*
5083 CCCTAGA
1 CCCTAAA
*
5090 CCCTAGA
1 CCCTAAA
*
5097 CCCTAGA
1 CCCTAAA
5104 CCCT-AA
1 CCCTAAA
*
5110 -CCTAGA
1 CCCTAAA
*
5116 CCCTAGA
1 CCCTAAA
*
5123 CCCTAGA
1 CCCTAAA
*
5130 CCCTAGA
1 CCCTAAA
5137 CCCTAGAA
1 CCCTA-AA
*
5145 CCCTTAGA
1 CCC-TAAA
*
5153 CCCTAGA
1 CCCTAAA
*
5160 CCCTAGA
1 CCCTAAA
*
5167 CCCTAGA
1 CCCTAAA
*
5174 CCCTAGA
1 CCCTAAA
*
5181 -CCTAGA
1 CCCTAAA
*
5187 CCCTAGA
1 CCCTAAA
*
5194 CCCTAGA
1 CCCTAAA
*
5201 CCCTAGA
1 CCCTAAA
*
5208 CCCTAGA
1 CCCTAAA
*
5215 CCCTAGA
1 CCCTAAA
*
5222 CCCTAGA
1 CCCTAAA
*
5229 CCCTAGA
1 CCCTAAA
*
5236 CCCTAGA
1 CCCTAAA
*
5243 CCCTAGA
1 CCCTAAA
5250 -CCT-AA
1 CCCTAAA
*
5255 CCCTAGA
1 CCCTAAA
*
5262 CCCTAGA
1 CCCTAAA
*
5269 CCCTAGA
1 CCCTAAA
*
5276 CCCTAGA
1 CCCTAAA
5283 CCCT-AA
1 CCCTAAA
*
5289 CCCTAGA
1 CCCTAAA
5296 CCCT--A
1 CCCTAAA
*
5301 CCCTAGA
1 CCCTAAA
*
5308 CCCTAGA
1 CCCTAAA
5315 -CCT-AA
1 CCCTAAA
*
5320 CCCTAGA
1 CCCTAAA
*
5327 CCCTAGA
1 CCCTAAA
*
5334 CCCTAGA
1 CCCTAAA
*
5341 CCCTAGA
1 CCCTAAA
*
5348 CCCTAGA
1 CCCTAAA
*
5355 CCCTAGA
1 CCCTAAA
*
5362 CCCTAGA
1 CCCTAAA
*
5369 CCCTAGA
1 CCCTAAA
5376 CCCT--A
1 CCCTAAA
*
5381 CCCTAGA
1 CCCTAAA
*
5388 CCCTAGA
1 CCCTAAA
*
5395 CCCTAGA
1 CCCTAAA
*
5402 CCCTAGA
1 CCCTAAA
*
5409 CCCTAGA
1 CCCTAAA
*
5416 CCCTAGA
1 CCCTAAA
*
5423 CCCTAGA
1 CCCTAAA
5430 CCCTAGAA
1 CCCTA-AA
*
5438 CCCTAGA
1 CCCTAAA
*
5445 CCCTAGA
1 CCCTAAA
*
5452 -CCTAGA
1 CCCTAAA
*
5458 CCCTAGA
1 CCCTAAA
*
5465 CCCTAGA
1 CCCTAAA
*
5472 CCCTAGA
1 CCCTAAA
*
5479 CCCTAGA
1 CCCTAAA
*
5486 CCCTAGA
1 CCCTAAA
*
5493 CCCTAGA
1 CCCTAAA
*
5500 -CCTAGA
1 CCCTAAA
*
5506 CCCTAGA
1 CCCTAAA
*
5513 CCCTAGA
1 CCCTAAA
*
5520 CCCTAGA
1 CCCTAAA
*
5527 CCCTAGA
1 CCCTAAA
*
5534 CCCTAGA
1 CCCTAAA
*
5541 CCCTAGA
1 CCCTAAA
5548 CCCTAAA
1 CCCTAAA
*
5555 CCCCCTAGA
1 --CCCTAAA
*
5564 CCCTAGA
1 CCCTAAA
*
5571 CCCTAGA
1 CCCTAAA
*
5578 CCCTAGA
1 CCCTAAA
*
5585 CCCTAGA
1 CCCTAAA
*
5592 CCCTAGA
1 CCCTAAA
*
5599 -CCTAGA
1 CCCTAAA
*
5605 CCCTAGA
1 CCCTAAA
*
5612 CCCTAGA
1 CCCTAAA
*
5619 CCCTAGA
1 CCCTAAA
*
5626 CCCTAGA
1 CCCTAAA
*
5633 CCCTAGA
1 CCCTAAA
*
5640 CCCTAGA
1 CCCTAAA
*
5647 CCCTAGA
1 CCCTAAA
*
5654 CCCTAGA
1 CCCTAAA
*
5661 CCCTAGA
1 CCCTAAA
*
5668 CCCTAGA
1 CCCTAAA
*
5675 CCCTAGA
1 CCCTAAA
*
5682 -CCTAGA
1 CCCTAAA
*
5688 -CCTAGA
1 CCCTAAA
*
5694 CCCTAGA
1 CCCTAAA
*
5701 CCCTAGA
1 CCCTAAA
*
5708 CCCTAGA
1 CCCTAAA
*
5715 CCCTAGA
1 CCCTAAA
*
5722 -CCTAGA
1 CCCTAAA
*
5728 CCCTAGA
1 CCCTAAA
*
5735 CCCTAGA
1 CCCTAAA
*
5742 CCCT-GA
1 CCCTAAA
*
5748 CCCTAGA
1 CCCTAAA
*
5755 CCCTAGA
1 CCCTAAA
*
5762 CCCTAGA
1 CCCTAAA
*
5769 CCCTAGA
1 CCCTAAA
*
5776 CCCTAGA
1 CCCTAAA
*
5783 CCCTAGA
1 CCCTAAA
*
5790 CCCTAGA
1 CCCTAAA
5797 CCCT-AA
1 CCCTAAA
*
5803 CCCTAGA
1 CCCTAAA
*
5810 --CTAGA
1 CCCTAAA
*
5815 -CCTAGA
1 CCCTAAA
*
5821 CCCTAGA
1 CCCTAAA
*
5828 CCC--GA
1 CCCTAAA
*
5833 CCCTAGA
1 CCCTAAA
*
5840 CCCTAGA
1 CCCTAAA
* *
5847 CCATAGA
1 CCCTAAA
*
5854 CCCTAGA
1 CCCTAAA
*
5861 CCCTAGA
1 CCCTAAA
*
5868 CCCTAGA
1 CCCTAAA
*
5875 CCCTAGA
1 CCCTAAA
*
5882 --CTAGA
1 CCCTAAA
*
5887 CCCTAGA
1 CCCTAAA
*
5894 CCCTAGA
1 CCCTAAA
*
5901 CCCTAGA
1 CCCTAAA
*
5908 -CCTAGA
1 CCCTAAA
*
5914 -CCTAGA
1 CCCTAAA
*
5920 -CCTAGA
1 CCCTAAA
*
5926 CCCTAGA
1 CCCTAAA
5933 CCCT-AA
1 CCCTAAA
*
5939 -CCTAGA
1 CCCTAAA
*
5945 CCCTAGA
1 CCCTAAA
*
5952 CCCTAGA
1 CCCTAAA
*
5959 CCCTAGA
1 CCCTAAA
*
5966 CCCTAGA
1 CCCTAAA
*
5973 CCCTAGA
1 CCCTAAA
*
5980 CCCTAGA
1 CCCTAAA
*
5987 -CCTAGA
1 CCCTAAA
*
5993 CCCTAGA
1 CCCTAAA
*
6000 CCCTAGA
1 CCCTAAA
*
6007 CCCTAGA
1 CCCTAAA
*
6014 CCCTAGA
1 CCCTAAA
*
6021 CCCTAGA
1 CCCTAAA
*
6028 CCCTAGA
1 CCCTAAA
*
6035 CCCTAGA
1 CCCTAAA
*
6042 CCCTAGA
1 CCCTAAA
*
6049 CCCTAGA
1 CCCTAAA
*
6056 -CCTAGA
1 CCCTAAA
*
6062 CCCTAGA
1 CCCTAAA
*
6069 CCCTAGA
1 CCCTAAA
*
6076 -CCTAGA
1 CCCTAAA
*
6082 CCCTAGA
1 CCCTAAA
*
6089 -CCTAGA
1 CCCTAAA
*
6095 CCCTAGA
1 CCCTAAA
*
6102 CCCTAGA
1 CCCTAAA
*
6109 CCCTAGA
1 CCCTAAA
*
6116 CCCTAGA
1 CCCTAAA
*
6123 CCCTAGA
1 CCCTAAA
*
6130 CCCTAGA
1 CCCTAAA
*
6137 CCCTAGA
1 CCCTAAA
6144 CCCT--A
1 CCCTAAA
* *
6149 GCCTAGA
1 CCCTAAA
*
6156 CCCTAGA
1 CCCTAAA
*
6163 CCCTAGA
1 CCCTAAA
*
6170 CCCTAGA
1 CCCTAAA
*
6177 CCCTAGA
1 CCCTAAA
*
6184 CCCTAGA
1 CCCTAAA
*
6191 CCCTAGA
1 CCCTAAA
* *
6198 CCATAGA
1 CCCTAAA
*
6205 CCCTAGA
1 CCCTAAA
*
6212 CCCTAGA
1 CCCTAAA
*
6219 CCCTAGA
1 CCCTAAA
*
6226 CCCTAGA
1 CCCTAAA
*
6233 CCCTAGA
1 CCCTAAA
*
6240 CCCTAGA
1 CCCTAAA
*
6247 CCCTAGA
1 CCCTAAA
*
6254 CCCTAGA
1 CCCTAAA
*
6261 -CCTAGA
1 CCCTAAA
*
6267 CCCTAGA
1 CCCTAAA
*
6274 CCCTAGA
1 CCCTAAA
*
6281 -CCTAGA
1 CCCTAAA
*
6287 CCCTAGA
1 CCCTAAA
*
6294 CCCTAGA
1 CCCTAAA
*
6301 CCCTAGA
1 CCCTAAA
*
6308 CCCTAGA
1 CCCTAAA
*
6315 CCCTAGA
1 CCCTAAA
*
6322 CCCTAGA
1 CCCTAAA
*
6329 CCCTAGA
1 CCCTAAA
*
6336 CCCTAGA
1 CCCTAAA
*
6343 CCCTAGA
1 CCCTAAA
*
6350 CCCTAGA
1 CCCTAAA
*
6357 CCCTAGA
1 CCCTAAA
*
6364 CCCTAGA
1 CCCTAAA
*
6371 CCCTAGA
1 CCCTAAA
*
6378 CCCTAGA
1 CCCTAAA
*
6385 CCCTAGA
1 CCCTAAA
*
6392 CCCTAGA
1 CCCTAAA
*
6399 CCCTAGA
1 CCCTAAA
*
6406 -CCTAGA
1 CCCTAAA
*
6412 CCCTAGA
1 CCCTAAA
*
6419 CCCTAGA
1 CCCTAAA
*
6426 CCCTAGA
1 CCCTAAA
*
6433 CCCTAGA
1 CCCTAAA
*
6440 CCCTAGA
1 CCCTAAA
*
6447 CCCTAGA
1 CCCTAAA
*
6454 CCCTAGA
1 CCCTAAA
*
6461 -CCTAGA
1 CCCTAAA
*
6467 CCCTAGA
1 CCCTAAA
*
6474 CCCTAGA
1 CCCTAAA
*
6481 CCCTAGA
1 CCCTAAA
*
6488 CCCTAGA
1 CCCTAAA
*
6495 CCCTAGA
1 CCCTAAA
*
6502 CCCTAGA
1 CCCTAAA
*
6509 CCCTAGA
1 CCCTAAA
*
6516 CCCTAGA
1 CCCTAAA
*
6523 -CCTAGA
1 CCCTAAA
*
6529 CCCTAGA
1 CCCTAAA
*
6536 CCCTAGA
1 CCCTAAA
*
6543 CCCTAGA
1 CCCTAAA
*
6550 -CCTAGA
1 CCCTAAA
*
6556 CCCTAGA
1 CCCTAAA
*
6563 CCCTAGA
1 CCCTAAA
*
6570 CCCTAGA
1 CCCTAAA
*
6577 CCCTAGA
1 CCCTAAA
*
6584 CCCTAGA
1 CCCTAAA
*
6591 CCCTAGA
1 CCCTAAA
*
6598 CCCTAGA
1 CCCTAAA
*
6605 CCCTAGA
1 CCCTAAA
*
6612 CCCTAGA
1 CCCTAAA
*
6619 CCCTAGA
1 CCCTAAA
*
6626 CCCTAGA
1 CCCTAAA
*
6633 CCCTAGA
1 CCCTAAA
*
6640 CCCTAGA
1 CCCTAAA
*
6647 CCCTAGA
1 CCCTAAA
*
6654 CCCTAGA
1 CCCTAAA
*
6661 CCCTAGA
1 CCCTAAA
*
6668 CCCTAGA
1 CCCTAAA
*
6675 CCCTAGA
1 CCCTAAA
*
6682 CCCTAGA
1 CCCTAAA
*
6689 CCCTAGA
1 CCCTAAA
*
6696 CCCTAGA
1 CCCTAAA
*
6703 CCCTAGA
1 CCCTAAA
*
6710 CCCTAGA
1 CCCTAAA
*
6717 CCCTAGA
1 CCCTAAA
*
6724 CCCTAGA
1 CCCTAAA
*
6731 CCCTAGA
1 CCCTAAA
*
6738 CCCTAGA
1 CCCTAAA
*
6745 CCCTAGA
1 CCCTAAA
*
6752 CCCTAGA
1 CCCTAAA
*
6759 CCCTAGA
1 CCCTAAA
*
6766 CCCTAGA
1 CCCTAAA
*
6773 CCCTAGA
1 CCCTAAA
*
6780 CCCTAGA
1 CCCTAAA
*
6787 CCCTAGA
1 CCCTAAA
*
6794 CCCTAGA
1 CCCTAAA
*
6801 CCCTAGA
1 CCCTAAA
*
6808 CCCTAGA
1 CCCTAAA
*
6815 CCCTAGA
1 CCCTAAA
*
6822 CCCTAGA
1 CCCTAAA
*
6829 CCCTAGA
1 CCCTAAA
*
6836 CCCTAGA
1 CCCTAAA
*
6843 CCCTAGA
1 CCCTAAA
*
6850 CCCTAGA
1 CCCTAAA
*
6857 CCCTAGA
1 CCCTAAA
*
6864 CCCTAGA
1 CCCTAAA
*
6871 CCCTAGA
1 CCCTAAA
*
6878 -CCTAGA
1 CCCTAAA
*
6884 CCCTAGA
1 CCCTAAA
*
6891 CCCTAGA
1 CCCTAAA
*
6898 CCCTAGA
1 CCCTAAA
*
6905 CCCTAGA
1 CCCTAAA
*
6912 CCCTAGA
1 CCCTAAA
*
6919 CCCTAGA
1 CCCTAAA
*
6926 CCCTAGA
1 CCCTAAA
6933 CCCT-AA
1 CCCTAAA
*
6939 CCCTAGA
1 CCCTAAA
*
6946 CCCTAGA
1 CCCTAAA
*
6953 CCCTAGA
1 CCCTAAA
*
6960 CCCTAGA
1 CCCTAAA
*
6967 -CCTAGA
1 CCCTAAA
*
6973 CCCTAGA
1 CCCTAAA
*
6980 CCCTAGA
1 CCCTAAA
*
6987 CCCTAGA
1 CCCTAAA
*
6994 CCCTAGA
1 CCCTAAA
*
7001 CCCTAGA
1 CCCTAAA
*
7008 CCCTAGA
1 CCCTAAA
*
7015 CCCTAGA
1 CCCTAAA
*
7022 CCCTAGA
1 CCCTAAA
*
7029 CCCTAGA
1 CCCTAAA
*
7036 CCCTAGA
1 CCCTAAA
*
7043 CCCTAGA
1 CCCTAAA
*
7050 CCCTAGA
1 CCCTAAA
*
7057 CCCTAGA
1 CCCTAAA
*
7064 CCCTAGA
1 CCCTAAA
*
7071 CCCTAGA
1 CCCTAAA
*
7078 CCCTAGA
1 CCCTAAA
*
7085 CCCTAGA
1 CCCTAAA
*
7092 CCCTAGA
1 CCCTAAA
*
7099 CCCTAGA
1 CCCTAAA
*
7106 CCCTAGA
1 CCCTAAA
*
7113 CCCTAGA
1 CCCTAAA
*
7120 CCCTAGA
1 CCCTAAA
*
7127 -CCTAGA
1 CCCTAAA
*
7133 CCCTAGA
1 CCCTAAA
*
7140 CCCTAGA
1 CCCTAAA
*
7147 -CCTAGA
1 CCCTAAA
*
7153 CCCTAGA
1 CCCTAAA
*
7160 CCCTAGA
1 CCCTAAA
*
7167 CCCTAGA
1 CCCTAAA
*
7174 -CCTAGA
1 CCCTAAA
*
7180 CCCTAGA
1 CCCTAAA
*
7187 CCCTAGA
1 CCCTAAA
*
7194 CCCTAGA
1 CCCTAAA
*
7201 -CCTAGA
1 CCCTAAA
*
7207 CCCTAGA
1 CCCTAAA
*
7214 CCCTAGA
1 CCCTAAA
*
7221 -CCTAGA
1 CCCTAAA
*
7227 CCCTAGA
1 CCCTAAA
*
7234 CCCTAGA
1 CCCTAAA
*
7241 CCCTAGA
1 CCCTAAA
*
7248 -CCTAGA
1 CCCTAAA
*
7254 CCCTAGA
1 CCCTAAA
*
7261 CCCTAGA
1 CCCTAAA
*
7268 CCCTAGA
1 CCCTAAA
*
7275 CCCTAGA
1 CCCTAAA
*
7282 CCCTAGA
1 CCCTAAA
*
7289 -CCTAGA
1 CCCTAAA
*
7295 CCCTAGA
1 CCCTAAA
*
7302 CCCTAGA
1 CCCTAAA
*
7309 CCCTAGA
1 CCCTAAA
*
7316 -CCTAGA
1 CCCTAAA
*
7322 CCCTAGA
1 CCCTAAA
*
7329 -CCTAGA
1 CCCTAAA
*
7335 CCCTAGA
1 CCCTAAA
*
7342 CCCTAGA
1 CCCTAAA
*
7349 CCCTAGA
1 CCCTAAA
*
7356 CCCTAGA
1 CCCTAAA
*
7363 CCCTAGA
1 CCCTAAA
*
7370 CCCTAGA
1 CCCTAAA
*
7377 CCCTAGA
1 CCCTAAA
*
7384 CCCTAGA
1 CCCTAAA
*
7391 CCCTAGA
1 CCCTAAA
*
7398 CCCTAGA
1 CCCTAAA
*
7405 CCCTAGA
1 CCCTAAA
*
7412 CCCTAGA
1 CCCTAAA
*
7419 CCCTAGA
1 CCCTAAA
*
7426 CCCTAGA
1 CCCTAAA
*
7433 CCCTAGA
1 CCCTAAA
*
7440 CCCTAGA
1 CCCTAAA
*
7447 CCCTAGA
1 CCCTAAA
*
7454 -CCTAGA
1 CCCTAAA
*
7460 CCCTAGA
1 CCCTAAA
*
7467 CCCTAGA
1 CCCTAAA
*
7474 CCCTAGA
1 CCCTAAA
*
7481 CCCTAGA
1 CCCTAAA
*
7488 -CCTAGA
1 CCCTAAA
*
7494 CCCTAGA
1 CCCTAAA
*
7501 CCCTAGA
1 CCCTAAA
*
7508 CCCTAGA
1 CCCTAAA
*
7515 CCCTAGA
1 CCCTAAA
*
7522 CCCTAGA
1 CCCTAAA
*
7529 CCCTAGA
1 CCCTAAA
*
7536 CCCTAGA
1 CCCTAAA
*
7543 CCCTAGA
1 CCCTAAA
*
7550 CCCTAGA
1 CCCTAAA
*
7557 CCCTAGA
1 CCCTAAA
*
7564 CCCTAGA
1 CCCTAAA
*
7571 CCCTAGA
1 CCCTAAA
*
7578 CCCTAGA
1 CCCTAAA
*
7585 CCCTAGA
1 CCCTAAA
*
7592 CCCTAGA
1 CCCTAAA
*
7599 CCCTAGA
1 CCCTAAA
*
7606 -CCTAGA
1 CCCTAAA
*
7612 CCCTAGA
1 CCCTAAA
*
7619 CCCTAGA
1 CCCTAAA
*
7626 CCCTAGA
1 CCCTAAA
*
7633 CCCTAGA
1 CCCTAAA
*
7640 CCCTAGA
1 CCCTAAA
*
7647 CCCTAGA
1 CCCTAAA
*
7654 CCCTAGA
1 CCCTAAA
*
7661 CCCTAGA
1 CCCTAAA
*
7668 CCCTAGA
1 CCCTAAA
*
7675 CCCTAGA
1 CCCTAAA
*
7682 CCCTAGA
1 CCCTAAA
*
7689 CCCTAGA
1 CCCTAAA
*
7696 CCCTAGA
1 CCCTAAA
*
7703 CCCTAGA
1 CCCTAAA
*
7710 CCCTAGA
1 CCCTAAA
*
7717 CCCTAGA
1 CCCTAAA
*
7724 CCCTAGA
1 CCCTAAA
*
7731 CCCTAGA
1 CCCTAAA
*
7738 CCCTAGA
1 CCCTAAA
*
7745 CCCTAGA
1 CCCTAAA
*
7752 -CCTAGA
1 CCCTAAA
*
7758 CCCTAGA
1 CCCTAAA
*
7765 CCCTAGA
1 CCCTAAA
*
7772 CCCTAGA
1 CCCTAAA
*
7779 CCCTAGA
1 CCCTAAA
*
7786 CCCTAGA
1 CCCTAAA
*
7793 CCCTAGA
1 CCCTAAA
*
7800 CCCTAGA
1 CCCTAAA
*
7807 CCCTAGA
1 CCCTAAA
*
7814 CCCTAGA
1 CCCTAAA
*
7821 CCCTAGA
1 CCCTAAA
*
7828 -CCTAGA
1 CCCTAAA
*
7834 CCCTAGA
1 CCCTAAA
*
7841 CCCTAGA
1 CCCTAAA
*
7848 CCCTAGA
1 CCCTAAA
*
7855 CCCTAGA
1 CCCTAAA
*
7862 CCCTAGA
1 CCCTAAA
*
7869 CCCTAGA
1 CCCTAAA
*
7876 CCCTAGA
1 CCCTAAA
*
7883 CCCTAGA
1 CCCTAAA
*
7890 -CCTAGA
1 CCCTAAA
*
7896 CCCTAGA
1 CCCTAAA
*
7903 CCCTAGA
1 CCCTAAA
*
7910 CCCTAGA
1 CCCTAAA
*
7917 CCCTAGA
1 CCCTAAA
*
7924 CCCTAGA
1 CCCTAAA
*
7931 CCCTAGA
1 CCCTAAA
*
7938 CCCTAGA
1 CCCTAAA
*
7945 CCCTAGA
1 CCCTAAA
*
7952 CCCTAGA
1 CCCTAAA
*
7959 CCCTAGA
1 CCCTAAA
*
7966 CCCTAGA
1 CCCTAAA
*
7973 CCCTAGA
1 CCCTAAA
*
7980 CCCTAGA
1 CCCTAAA
*
7987 CCCTAGA
1 CCCTAAA
*
7994 CCCTAGA
1 CCCTAAA
*
8001 CCCTAGA
1 CCCTAAA
*
8008 CCCTAGA
1 CCCTAAA
*
8015 -CCTAGA
1 CCCTAAA
*
8021 CCCTAGA
1 CCCTAAA
*
8028 CCCTAGA
1 CCCTAAA
*
8035 CCCTAGA
1 CCCTAAA
*
8042 CCCTAGA
1 CCCTAAA
*
8049 CCCTAGA
1 CCCTAAA
*
8056 CCCTAGA
1 CCCTAAA
*
8063 CCCTAGA
1 CCCTAAA
*
8070 CCCTAGA
1 CCCTAAA
*
8077 CCCTAGA
1 CCCTAAA
*
8084 -CCTAGA
1 CCCTAAA
*
8090 CCCTAGA
1 CCCTAAA
*
8097 CCCTAGA
1 CCCTAAA
*
8104 CCCTAGA
1 CCCTAAA
*
8111 CCCTAGA
1 CCCTAAA
*
8118 CCCTAGA
1 CCCTAAA
*
8125 CCCTAGA
1 CCCTAAA
*
8132 CCCTAGA
1 CCCTAAA
*
8139 CCCTAGA
1 CCCTAAA
*
8146 CCCTAGA
1 CCCTAAA
*
8153 CCCTAGA
1 CCCTAAA
*
8160 CCCTAGA
1 CCCTAAA
*
8167 CCCTAGA
1 CCCTAAA
*
8174 CCCTAGA
1 CCCTAAA
*
8181 -CCTAGA
1 CCCTAAA
8187 -CCT--A
1 CCCTAAA
*
8191 CCCTAGA
1 CCCTAAA
*
8198 CCCTAGA
1 CCCTAAA
*
8205 CCCTAGA
1 CCCTAAA
*
8212 CCCTAGA
1 CCCTAAA
*
8219 CCCTAGA
1 CCCTAAA
*
8226 CCCTAGA
1 CCCTAAA
*
8233 CCCTAGA
1 CCCTAAA
*
8240 CCCTAGA
1 CCCTAAA
*
8247 CCCTAGA
1 CCCTAAA
*
8254 CCCTAGA
1 CCCTAAA
*
8261 CCCTAGA
1 CCCTAAA
*
8268 CCCTAGA
1 CCCTAAA
*
8275 -CCTAGA
1 CCCTAAA
*
8281 CCCTAGA
1 CCCTAAA
*
8288 CCCTAGA
1 CCCTAAA
*
8295 CCCTAGA
1 CCCTAAA
*
8302 CCCTAGA
1 CCCTAAA
*
8309 -CCTAGA
1 CCCTAAA
*
8315 CCCTAGA
1 CCCTAAA
*
8322 CCCTAGA
1 CCCTAAA
*
8329 CCCTAGA
1 CCCTAAA
*
8336 CCCTAGA
1 CCCTAAA
*
8343 CCCTAGA
1 CCCTAAA
*
8350 CCCTAGA
1 CCCTAAA
*
8357 CCCTAGA
1 CCCTAAA
*
8364 CCCTAGA
1 CCCTAAA
*
8371 CCCTAGA
1 CCCTAAA
*
8378 CCCTAGA
1 CCCTAAA
*
8385 CCCTAGA
1 CCCTAAA
*
8392 CCCTAGA
1 CCCTAAA
*
8399 CCCTAGA
1 CCCTAAA
*
8406 CCCTAGA
1 CCCTAAA
*
8413 -CCTAGA
1 CCCTAAA
*
8419 CCCTAGA
1 CCCTAAA
*
8426 CCCTAGA
1 CCCTAAA
*
8433 CCCTAGA
1 CCCTAAA
*
8440 CCCTAGA
1 CCCTAAA
*
8447 CCCTAGA
1 CCCTAAA
*
8454 CCCTAGA
1 CCCTAAA
*
8461 CCCTAGA
1 CCCTAAA
*
8468 CCCTAGA
1 CCCTAAA
*
8475 -CCTAGA
1 CCCTAAA
*
8481 CCCTAGA
1 CCCTAAA
*
8488 CCCTAGA
1 CCCTAAA
*
8495 CCCTAGA
1 CCCTAAA
*
8502 CCCTAGA
1 CCCTAAA
*
8509 CCCTAGA
1 CCCTAAA
*
8516 CCCTAGA
1 CCCTAAA
*
8523 -CCTAGA
1 CCCTAAA
*
8529 CCCTAGA
1 CCCTAAA
*
8536 CCCTAGA
1 CCCTAAA
*
8543 CCCTAGA
1 CCCTAAA
*
8550 CCCTAGA
1 CCCTAAA
*
8557 CCCTAGA
1 CCCTAAA
*
8564 CCCTAGA
1 CCCTAAA
*
8571 CCCTAGA
1 CCCTAAA
*
8578 CCCTAGA
1 CCCTAAA
*
8585 CCCTAGA
1 CCCTAAA
*
8592 CCCTAGA
1 CCCTAAA
*
8599 -CCTAGA
1 CCCTAAA
*
8605 CCCTAGA
1 CCCTAAA
*
8612 -CCTAGA
1 CCCTAAA
*
8618 CCCTAGA
1 CCCTAAA
*
8625 CCCTAGA
1 CCCTAAA
*
8632 CCCTAGA
1 CCCTAAA
*
8639 CCCTAGA
1 CCCTAAA
*
8646 CCCTAGA
1 CCCTAAA
*
8653 CCCTAGA
1 CCCTAAA
*
8660 CCCTAGA
1 CCCTAAA
*
8667 CCCTAGA
1 CCCTAAA
*
8674 CCCTAGA
1 CCCTAAA
*
8681 CCCTAGA
1 CCCTAAA
*
8688 CCCTAGA
1 CCCTAAA
*
8695 CCCTAGA
1 CCCTAAA
*
8702 CCCTAGA
1 CCCTAAA
*
8709 -CCTAGA
1 CCCTAAA
*
8715 CCCTAGA
1 CCCTAAA
*
8722 CCCTAGA
1 CCCTAAA
*
8729 CCCTAGA
1 CCCTAAA
*
8736 CCCTAGA
1 CCCTAAA
*
8743 CCCTAGA
1 CCCTAAA
*
8750 CCCTAGA
1 CCCTAAA
*
8757 CCCTAGA
1 CCCTAAA
*
8764 CCCTAGA
1 CCCTAAA
*
8771 CCCTAGA
1 CCCTAAA
*
8778 CCCTAGA
1 CCCTAAA
*
8785 CCCTAGA
1 CCCTAAA
*
8792 -CCTAGA
1 CCCTAAA
*
8798 -CCTAGA
1 CCCTAAA
*
8804 CCCTAGA
1 CCCTAAA
*
8811 CCCTAGA
1 CCCTAAA
*
8818 CCCTAGA
1 CCCTAAA
*
8825 CCCTAGA
1 CCCTAAA
*
8832 CCCTAGA
1 CCCTAAA
*
8839 CCCTAGA
1 CCCTAAA
*
8846 CCCTAGA
1 CCCTAAA
*
8853 CCCTAGA
1 CCCTAAA
*
8860 CCCTAGA
1 CCCTAAA
*
8867 -CCTAGA
1 CCCTAAA
*
8873 CCCTAGA
1 CCCTAAA
*
8880 -CCTAGA
1 CCCTAAA
*
8886 CCCTAGA
1 CCCTAAA
*
8893 CCCTAGA
1 CCCTAAA
*
8900 CCCTAGA
1 CCCTAAA
*
8907 CCCTAGA
1 CCCTAAA
*
8914 CCCTAGA
1 CCCTAAA
*
8921 CCCTAGA
1 CCCTAAA
*
8928 CCCTAGA
1 CCCTAAA
*
8935 CCCTAGA
1 CCCTAAA
*
8942 CCCTAGA
1 CCCTAAA
*
8949 CCCTAGA
1 CCCTAAA
*
8956 CCCTAGA
1 CCCTAAA
*
8963 CCCTAGA
1 CCCTAAA
*
8970 CCCTAGA
1 CCCTAAA
*
8977 CCCTAGA
1 CCCTAAA
*
8984 CCCTAGA
1 CCCTAAA
*
8991 CCCTAGA
1 CCCTAAA
*
8998 CCCTAGA
1 CCCTAAA
*
9005 CCCTAGA
1 CCCTAAA
*
9012 CCCTAGA
1 CCCTAAA
*
9019 CCCTAGA
1 CCCTAAA
*
9026 CCCTAGA
1 CCCTAAA
9033 CCCTAGACCGA
1 CCCTA-A---A
*
9044 CCCTAGA
1 CCCTAAA
*
9051 CCCTAGA
1 CCCTAAA
*
9058 CCCTAGA
1 CCCTAAA
*
9065 CCCTAGA
1 CCCTAAA
*
9072 CCCTAGA
1 CCCTAAA
*
9079 --CTAGA
1 CCCTAAA
*
9084 CCCTAGA
1 CCCTAAA
*
9091 CCCTAGA
1 CCCTAAA
*
9098 CCCTAGA
1 CCCTAAA
*
9105 CCCTAGA
1 CCCTAAA
*
9112 CCCTAGA
1 CCCTAAA
*
9119 CCCTAGA
1 CCCTAAA
*
9126 -CCTAGA
1 CCCTAAA
*
9132 CCCTAGA
1 CCCTAAA
*
9139 CCCTAGA
1 CCCTAAA
*
9146 CCCTAGA
1 CCCTAAA
*
9153 CCCTAGA
1 CCCTAAA
*
9160 CCCTAGA
1 CCCTAAA
*
9167 CCCTAGA
1 CCCTAAA
*
9174 CCCTAGA
1 CCCTAAA
*
9181 CCCTAGA
1 CCCTAAA
*
9188 CCCTAGA
1 CCCTAAA
*
9195 CCCTAGA
1 CCCTAAA
*
9202 CCCTAGA
1 CCCTAAA
*
9209 CCCTAGA
1 CCCTAAA
*
9216 -CCTAGA
1 CCCTAAA
*
9222 CCCTAGA
1 CCCTAAA
*
9229 CCCTAGA
1 CCCTAAA
*
9236 CCCTAGA
1 CCCTAAA
*
9243 CCCTAGA
1 CCCTAAA
*
9250 CCCTAGA
1 CCCTAAA
*
9257 CCCTAGA
1 CCCTAAA
*
9264 CCCTAGA
1 CCCTAAA
*
9271 -CCTAGA
1 CCCTAAA
*
9277 CCCTAGA
1 CCCTAAA
*
9284 -CCTAGA
1 CCCTAAA
*
9290 CCCTAGA
1 CCCTAAA
*
9297 CCCTAGA
1 CCCTAAA
*
9304 CCCTAGA
1 CCCTAAA
*
9311 CCCTAGA
1 CCCTAAA
*
9318 CCCTAGA
1 CCCTAAA
*
9325 CCCTAGA
1 CCCTAAA
*
9332 CCCTAGA
1 CCCTAAA
*
9339 CCCTAGA
1 CCCTAAA
*
9346 CCCTAGA
1 CCCTAAA
*
9353 CCCTAGA
1 CCCTAAA
*
9360 -CCTAGA
1 CCCTAAA
*
9366 CCCTAGA
1 CCCTAAA
*
9373 CCCTAGA
1 CCCTAAA
*
9380 CCCTAGA
1 CCCTAAA
9387 CCCT-AA
1 CCCTAAA
9393 CCCT-AA
1 CCCTAAA
9399 CCCTAAA
1 CCCTAAA
9406 CCCT--A
1 CCCTAAA
9411 CCCT-AA
1 CCCTAAA
*
9417 CCCTAGA
1 CCCTAAA
9424 CCCT-AA
1 CCCTAAA
9430 CCCTAAA
1 CCCTAAA
9437 CCCTAAA
1 CCCTAAA
9444 CCCT-AA
1 CCCTAAA
9450 CCCTAAA
1 CCCTAAA
9457 CCCT-AA
1 CCCTAAA
9463 CCCT-AA
1 CCCTAAA
9469 CCCTAAA
1 CCCTAAA
9476 CCCT-AA
1 CCCTAAA
9482 CCCTAAA
1 CCCTAAA
*
9489 -CCTAACC
1 CCCTAA-A
9496 CCCT-AA
1 CCCTAAA
9502 CCCTAAA
1 CCCTAAA
9509 CCCT-AA
1 CCCTAAA
9515 CCCTAAA
1 CCCTAAA
9522 CCCTAAA
1 CCCTAAA
9529 CCCTAAA
1 CCCTAAA
9536 CCCTAAA
1 CCCTAAA
9543 CCCTAAA
1 CCCTAAA
9550 CCCTAAA
1 CCCTAAA
9557 CCCTAAA
1 CCCTAAA
9564 CCCTAAA
1 CCCTAAA
9571 CCCTAAA
1 CCCTAAA
9578 CCCTAAA
1 CCCTAAA
9585 CCCTAAA
1 CCCTAAA
9592 CCCTAAA
1 CCCTAAA
9599 CCCTAAAA
1 CCCT-AAA
9607 CCCTAAA
1 CCCTAAA
9614 CCCTAAA
1 CCCTAAA
9621 CCCTAAA
1 CCCTAAA
9628 CCCTAAA
1 CCCTAAA
9635 CCCTAAA
1 CCCTAAA
9642 CCCTAAA
1 CCCTAAA
9649 CCCTAAA
1 CCCTAAA
9656 CCCTAAA
1 CCCTAAA
9663 CCCT-AA
1 CCCTAAA
9669 CCCTAAA
1 CCCTAAA
9676 CCCTAAA
1 CCCTAAA
9683 CCCTAAA
1 CCCTAAA
9690 CCCTAAA
1 CCCTAAA
9697 CCCTAAA
1 CCCTAAA
9704 CCCTAAA
1 CCCTAAA
9711 CCCT-AA
1 CCCTAAA
9717 CCCTAAA
1 CCCTAAA
9724 CCCTAAA
1 CCCTAAA
9731 CCCTAAA
1 CCCTAAA
9738 CCCTAAA
1 CCCTAAA
9745 CCCTAAA
1 CCCTAAA
9752 CCCTAAA
1 CCCTAAA
9759 CCCTAAA
1 CCCTAAA
9766 CCCTAAA
1 CCCTAAA
9773 CCCTAAA
1 CCCTAAA
9780 CCCTAAA
1 CCCTAAA
9787 CCCTAAA
1 CCCTAAA
9794 CCCTAAA
1 CCCTAAA
9801 CCCTAAA
1 CCCTAAA
9808 CCCTAAA
1 CCCTAAA
9815 CCCTAAA
1 CCCTAAA
9822 CCCTAAA
1 CCCTAAA
9829 CCCTAAA
1 CCCTAAA
9836 CCCTAAA
1 CCCTAAA
9843 CCCTAAA
1 CCCTAAA
9850 CCCT-AA
1 CCCTAAA
9856 CCCTAAA
1 CCCTAAA
9863 CCCTAAA
1 CCCTAAA
9870 CCCTAAA
1 CCCTAAA
9877 CCCTAAA
1 CCCTAAA
9884 CCCTAAA
1 CCCTAAA
9891 CCCTAAA
1 CCCTAAA
9898 CCCTAAA
1 CCCTAAA
9905 CCCTAAA
1 CCCTAAA
9912 CCCTAAA
1 CCCTAAA
9919 CCCTAAA
1 CCCTAAA
9926 CCCTAAA
1 CCCTAAA
9933 CCCT-AA
1 CCCTAAA
9939 CCCTAAA
1 CCCTAAA
9946 CCCTAAA
1 CCCTAAA
9953 CCCTAAA
1 CCCTAAA
9960 CCCTAAA
1 CCCTAAA
9967 -CCT-AA
1 CCCTAAA
9972 CCCTAAA
1 CCCTAAA
9979 CCCTAAA
1 CCCTAAA
9986 CCCTAAA
1 CCCTAAA
9993 CCCTAAA
1 CCCTAAA
10000 CCCTAAA
1 CCCTAAA
10007 CCCTAAA
1 CCCTAAA
10014 CCCTAAA
1 CCCTAAA
10021 CCCTAAA
1 CCCTAAA
10028 CCCTAAA
1 CCCTAAA
10035 CCCTAAA
1 CCCTAAA
10042 CCCTAAA
1 CCCTAAA
10049 CCCTAAA
1 CCCTAAA
10056 CCCTAAA
1 CCCTAAA
10063 CCCT-AA
1 CCCTAAA
10069 CCCTAAA
1 CCCTAAA
10076 CCCTAAA
1 CCCTAAA
10083 CCCTAAA
1 CCCTAAA
10090 CCCTAAA
1 CCCTAAA
10097 CCCTAAA
1 CCCTAAA
10104 CCCTAAA
1 CCCTAAA
10111 CCCTAAA
1 CCCTAAA
10118 CCCTAAA
1 CCCTAAA
10125 CCCTAAA
1 CCCTAAA
10132 CCCTAAA
1 CCCTAAA
10139 CCCTAAA
1 CCCTAAA
10146 CCCTAAA
1 CCCTAAA
10153 CCCTAAA
1 CCCTAAA
10160 CCCT-AA
1 CCCTAAA
10166 CCCTAAA
1 CCCTAAA
10173 CCCTAAA
1 CCCTAAA
10180 CCCTAAA
1 CCCTAAA
10187 CCCTAAA
1 CCCTAAA
10194 CCCTAAA
1 CCCTAAA
10201 CCCTAAA
1 CCCTAAA
10208 CCCTAAA
1 CCCTAAA
10215 CCCTAAA
1 CCCTAAA
10222 CCCTAAA
1 CCCTAAA
10229 CCCTAAA
1 CCCTAAA
10236 CCCTAAA
1 CCCTAAA
10243 CCCTAAA
1 CCCTAAA
10250 CCCTAAA
1 CCCTAAA
10257 CCCTAAA
1 CCCTAAA
10264 CCCTAAA
1 CCCTAAA
10271 CCCTAAA
1 CCCTAAA
10278 CCCTAAA
1 CCCTAAA
10285 CCCTAAA
1 CCCTAAA
10292 CCCTAAA
1 CCCTAAA
10299 CCCTAAA
1 CCCTAAA
10306 CCCTAAA
1 CCCTAAA
10313 CCCTAAA
1 CCCTAAA
10320 CCCTAAA
1 CCCTAAA
10327 CCCTAAA
1 CCCTAAA
10334 CCCTAAA
1 CCCTAAA
10341 CCCT-AA
1 CCCTAAA
10347 CCCTAAA
1 CCCTAAA
10354 CCCTAAA
1 CCCTAAA
10361 CCCTAAA
1 CCCTAAA
10368 CCCTAAA
1 CCCTAAA
10375 CCCTAAA
1 CCCTAAA
10382 CCCTAAA
1 CCCTAAA
10389 CCCTAAA
1 CCCTAAA
10396 CCCTAAA
1 CCCTAAA
10403 CCCTAAA
1 CCCTAAA
10410 CCCTAAA
1 CCCTAAA
10417 CCCTAAA
1 CCCTAAA
10424 CCCTAAA
1 CCCTAAA
10431 CCCTAAA
1 CCCTAAA
10438 CCCTAAA
1 CCCTAAA
10445 CCCT-AA
1 CCCTAAA
10451 CCCTAAA
1 CCCTAAA
10458 CCCTAAA
1 CCCTAAA
10465 CCCTAAA
1 CCCTAAA
10472 CCCTAAA
1 CCCTAAA
10479 CCCTAAA
1 CCCTAAA
10486 CCCTAAA
1 CCCTAAA
10493 CCCTAAA
1 CCCTAAA
10500 CCCTAAA
1 CCCTAAA
10507 CCCTAAA
1 CCCTAAA
10514 CCCTAAA
1 CCCTAAA
10521 CCCTAAA
1 CCCTAAA
10528 CCCTAAA
1 CCCTAAA
10535 CCCTAAA
1 CCCTAAA
10542 CCCTAAA
1 CCCTAAA
10549 CCCTAAA
1 CCCTAAA
10556 CCCTAAA
1 CCCTAAA
10563 CCCTAAA
1 CCCTAAA
10570 CCCTAAA
1 CCCTAAA
10577 CCCTAAA
1 CCCTAAA
10584 CCCTAAA
1 CCCTAAA
10591 CCCTAAA
1 CCCTAAA
10598 CCCTAAA
1 CCCTAAA
10605 CCCTAAA
1 CCCTAAA
10612 CCCTAAA
1 CCCTAAA
10619 CCCTAAA
1 CCCTAAA
10626 CCCTAAA
1 CCCTAAA
10633 -CCTAAA
1 CCCTAAA
10639 CCCT-AA
1 CCCTAAA
10645 CCCTAAA
1 CCCTAAA
10652 CCCTAAA
1 CCCTAAA
10659 CCCTAAA
1 CCCTAAA
10666 CCCTAAA
1 CCCTAAA
10673 CCCTAAA
1 CCCTAAA
10680 CCCTAAA
1 CCCTAAA
10687 CCCTAAA
1 CCCTAAA
10694 CCCTAAA
1 CCCTAAA
10701 CCCTAAA
1 CCCTAAA
10708 CCCTAAA
1 CCCTAAA
10715 CCCTAAA
1 CCCTAAA
10722 CCCTAAA
1 CCCTAAA
10729 CCCTAAA
1 CCCTAAA
10736 CCCTAAA
1 CCCTAAA
10743 CCCTAAA
1 CCCTAAA
10750 CCCTAAA
1 CCCTAAA
10757 CCCTAAA
1 CCCTAAA
10764 CCCTAAA
1 CCCTAAA
10771 CCCTAAA
1 CCCTAAA
10778 CCCTAAA
1 CCCTAAA
10785 CCCTAAA
1 CCCTAAA
10792 CCCTAAA
1 CCCTAAA
10799 CCCTAAA
1 CCCTAAA
10806 CCCTAAA
1 CCCTAAA
10813 CCCTAAA
1 CCCTAAA
10820 CCCTAAA
1 CCCTAAA
10827 CCCTAAA
1 CCCTAAA
10834 -CCTAAA
1 CCCTAAA
10840 CCCTAAA
1 CCCTAAA
10847 CCCTAAA
1 CCCTAAA
10854 CCCTAAA
1 CCCTAAA
10861 CCCTAAA
1 CCCTAAA
10868 CCCTAAA
1 CCCTAAA
10875 CCCTAAA
1 CCCTAAA
10882 CCCTAAA
1 CCCTAAA
10889 -CCTAAA
1 CCCTAAA
10895 CCCTAAA
1 CCCTAAA
10902 CCCTAAA
1 CCCTAAA
10909 CCCTAAA
1 CCCTAAA
10916 CCCTAAA
1 CCCTAAA
10923 CCCTAAA
1 CCCTAAA
10930 CCCTAAA
1 CCCTAAA
10937 CCCTAAA
1 CCCTAAA
10944 CCCTAAA
1 CCCTAAA
10951 CCCTAAA
1 CCCTAAA
10958 CCCTAAA
1 CCCTAAA
10965 CCCTAAA
1 CCCTAAA
10972 CCCTAAA
1 CCCTAAA
10979 CCCTAAA
1 CCCTAAA
10986 CCCT-AA
1 CCCTAAA
10992 CCCTAAA
1 CCCTAAA
10999 CCCTAAA
1 CCCTAAA
11006 CCCTAAA
1 CCCTAAA
11013 CCCTAAA
1 CCCTAAA
11020 CCCTAAA
1 CCCTAAA
11027 CCCTAAA
1 CCCTAAA
11034 CCCTAAA
1 CCCTAAA
11041 CCCTAAA
1 CCCTAAA
11048 CCCTAAA
1 CCCTAAA
11055 CCCTAAA
1 CCCTAAA
11062 CCCTAAA
1 CCCTAAA
11069 -CCTAAA
1 CCCTAAA
11075 CCCTAAA
1 CCCTAAA
11082 CCCTAAA
1 CCCTAAA
11089 CCCTAAA
1 CCCTAAA
11096 CCCTAAA
1 CCCTAAA
11103 -CCTAAA
1 CCCTAAA
11109 CCCTAAA
1 CCCTAAA
11116 CCCTAAA
1 CCCTAAA
11123 CCCTAAA
1 CCCTAAA
11130 CCCTAAA
1 CCCTAAA
11137 CCCTAAA
1 CCCTAAA
11144 CCCTAAA
1 CCCTAAA
11151 CCCTAAA
1 CCCTAAA
11158 CCCTAAA
1 CCCTAAA
11165 CCCTAAA
1 CCCTAAA
11172 CCCTAAA
1 CCCTAAA
11179 CCCTAAA
1 CCCTAAA
11186 CCCTAAA
1 CCCTAAA
11193 CCCTAAA
1 CCCTAAA
11200 CCCTAAA
1 CCCTAAA
11207 CCCTAAA
1 CCCTAAA
11214 CCCTAAA
1 CCCTAAA
11221 CCCT-AA
1 CCCTAAA
11227 CCCTAAA
1 CCCTAAA
11234 CCCTAAA
1 CCCTAAA
11241 CCCTAAA
1 CCCTAAA
11248 CCCTAAA
1 CCCTAAA
11255 CCCTAAA
1 CCCTAAA
11262 CCCTAAA
1 CCCTAAA
11269 CCCTAAA
1 CCCTAAA
11276 CCCTAAA
1 CCCTAAA
11283 CCCTAAA
1 CCCTAAA
11290 CCCTAAA
1 CCCTAAA
11297 CCCTAAA
1 CCCTAAA
11304 CCCTAAA
1 CCCTAAA
11311 CCCTAAA
1 CCCTAAA
11318 CCCTAAA
1 CCCTAAA
11325 CCCTAAA
1 CCCTAAA
11332 CCCTAAA
1 CCCTAAA
11339 CCCTAAA
1 CCCTAAA
11346 CCCTAAA
1 CCCTAAA
11353 CCCTAAA
1 CCCTAAA
11360 CCCTAAA
1 CCCTAAA
11367 CCCTAAA
1 CCCTAAA
11374 CCCTAAA
1 CCCTAAA
11381 CCCTAAA
1 CCCTAAA
11388 CCCTAAA
1 CCCTAAA
11395 CCCTAAA
1 CCCTAAA
11402 CCCTAAA
1 CCCTAAA
11409 CCCTAAA
1 CCCTAAA
11416 CCCTAAA
1 CCCTAAA
11423 CCCTAAA
1 CCCTAAA
11430 CCCTAAA
1 CCCTAAA
11437 CCCTAAA
1 CCCTAAA
11444 CCCTAAA
1 CCCTAAA
11451 CCCTAAA
1 CCCTAAA
11458 CCCTAAA
1 CCCTAAA
11465 -CCTAAA
1 CCCTAAA
11471 CCCTAAA
1 CCCTAAA
11478 CCCTAAA
1 CCCTAAA
11485 CCCTAAA
1 CCCTAAA
11492 CCCT-AA
1 CCCTAAA
11498 CCCTAAA
1 CCCTAAA
11505 CCCTAAA
1 CCCTAAA
11512 CCCTAAA
1 CCCTAAA
11519 CCCTAAA
1 CCCTAAA
11526 CCCTAAA
1 CCCTAAA
11533 CCCTAAA
1 CCCTAAA
11540 CCCTAAA
1 CCCTAAA
11547 CCCTAAA
1 CCCTAAA
11554 CCCTAAA
1 CCCTAAA
11561 CCCTAAA
1 CCCTAAA
11568 CCCTAAA
1 CCCTAAA
11575 CCCTAAA
1 CCCTAAA
11582 CCCTAAA
1 CCCTAAA
11589 CCCTAAA
1 CCCTAAA
11596 CCCTAAA
1 CCCTAAA
11603 CCCTAAA
1 CCCTAAA
11610 CCCTAAA
1 CCCTAAA
11617 CCCTAAA
1 CCCTAAA
11624 CCCTAAA
1 CCCTAAA
11631 CCCTAAA
1 CCCTAAA
11638 CCCTAAA
1 CCCTAAA
11645 CCCTAAA
1 CCCTAAA
11652 CCCTAAAA
1 CCCT-AAA
11660 CCCTAAA
1 CCCTAAA
11667 CCCTAAA
1 CCCTAAA
11674 CCCTAAA
1 CCCTAAA
11681 CCCTAAA
1 CCCTAAA
11688 CCCT-AA
1 CCCTAAA
11694 CCCTAAA
1 CCCTAAA
11701 CCCTAAA
1 CCCTAAA
11708 CCCTAAA
1 CCCTAAA
11715 CCCTAAA
1 CCCTAAA
11722 CCCTAAA
1 CCCTAAA
11729 CCCTAAA
1 CCCTAAA
11736 CCCTAAA
1 CCCTAAA
11743 CCCTAAAA
1 CCCT-AAA
11751 CCCCCCTAAA
1 ---CCCTAAA
11761 CCCTAAA
1 CCCTAAA
11768 CCCTAAA
1 CCCTAAA
11775 CCCTAAA
1 CCCTAAA
11782 -CCTAAA
1 CCCTAAA
11788 CCCTAAA
1 CCCTAAA
11795 CCCTAAA
1 CCCTAAA
11802 CCCT-AA
1 CCCTAAA
11808 CCCTAAA
1 CCCTAAA
11815 CCCTAAA
1 CCCTAAA
11822 CCCTAAA
1 CCCTAAA
11829 CCCTAAA
1 CCCTAAA
11836 CCCTAAA
1 CCCTAAA
11843 CCCTAAA
1 CCCTAAA
11850 CCCTAAA
1 CCCTAAA
11857 CCCTAAA
1 CCCTAAA
11864 CCCTAAA
1 CCCTAAA
11871 CCCT-AA
1 CCCTAAA
11877 CCCTAAA
1 CCCTAAA
11884 CCCTAAA
1 CCCTAAA
11891 CCCTAAA
1 CCCTAAA
11898 CCCTAAA
1 CCCTAAA
11905 CCCTAAA
1 CCCTAAA
11912 CCCTAAA
1 CCCTAAA
11919 CCCTAAA
1 CCCTAAA
11926 CCCT-AA
1 CCCTAAA
11932 CCCTAAA
1 CCCTAAA
11939 CCCTAAA
1 CCCTAAA
11946 CCCTAAA
1 CCCTAAA
11953 CCCTAAA
1 CCCTAAA
11960 CCCTAAA
1 CCCTAAA
11967 CCCTAAA
1 CCCTAAA
11974 CCCT-AA
1 CCCTAAA
11980 CCCT-AA
1 CCCTAAA
11986 CCCTAAA
1 CCCTAAA
11993 CCCTAAA
1 CCCTAAA
12000 CCCTAAA
1 CCCTAAA
12007 CCCTAAA
1 CCCTAAA
12014 CCCTAAA
1 CCCTAAA
12021 CCCTAAA
1 CCCTAAA
12028 CCCTAAA
1 CCCTAAA
12035 CCCTAAA
1 CCCTAAA
12042 CCCTAAA
1 CCCTAAA
12049 CCCTAAA
1 CCCTAAA
12056 CCCTAAA
1 CCCTAAA
12063 CCCTAAA
1 CCCTAAA
12070 CCCTAAA
1 CCCTAAA
12077 CCCTAAA
1 CCCTAAA
12084 CCCTAAA
1 CCCTAAA
12091 CCCTAAA
1 CCCTAAA
12098 CCCTAAA
1 CCCTAAA
12105 CCCTAAA
1 CCCTAAA
12112 CCCTAAA
1 CCCTAAA
12119 CCCTAAA
1 CCCTAAA
12126 CCCTAAA
1 CCCTAAA
12133 CCCTAAA
1 CCCTAAA
12140 CCCTAAA
1 CCCTAAA
12147 -CCTAAA
1 CCCTAAA
12153 CCCTAAA
1 CCCTAAA
12160 CCCTAAA
1 CCCTAAA
12167 CCCTAAA
1 CCCTAAA
12174 CCCTAAAA
1 CCCT-AAA
12182 CCCTAAA
1 CCCTAAA
12189 CCCTAAA
1 CCCTAAA
12196 CCCTAAA
1 CCCTAAA
12203 CCCTAAA
1 CCCTAAA
12210 CCCTAAA
1 CCCTAAA
12217 CCCTAAA
1 CCCTAAA
12224 CCCTAAA
1 CCCTAAA
12231 CCCTAAA
1 CCCTAAA
12238 CCCTAAA
1 CCCTAAA
12245 CCCTAAA
1 CCCTAAA
12252 CCCTAAA
1 CCCTAAA
12259 CCCTAAA
1 CCCTAAA
12266 CCCTAAA
1 CCCTAAA
12273 CCCTAAA
1 CCCTAAA
12280 CCCTAAA
1 CCCTAAA
12287 CCCTAAA
1 CCCTAAA
12294 CCCTAAA
1 CCCTAAA
12301 CCCTAAA
1 CCCTAAA
12308 CCCTAAA
1 CCCTAAA
12315 CCCTAAA
1 CCCTAAA
12322 CCCTAAA
1 CCCTAAA
12329 CCCTAAA
1 CCCTAAA
12336 CCCTAAA
1 CCCTAAA
12343 CCCTAAA
1 CCCTAAA
12350 CCCTAAA
1 CCCTAAA
12357 CCCTAAA
1 CCCTAAA
12364 CCCTAAA
1 CCCTAAA
12371 CCCTAAA
1 CCCTAAA
12378 CCCT-AA
1 CCCTAAA
12384 CCCTAAA
1 CCCTAAA
12391 CCCTAAA
1 CCCTAAA
12398 CCCTAAA
1 CCCTAAA
12405 CCCTAAA
1 CCCTAAA
12412 CCCTAAA
1 CCCTAAA
12419 CCCTAAAA
1 CCCT-AAA
12427 CCCTAAA
1 CCCTAAA
12434 CCCTAAA
1 CCCTAAA
12441 CCCTAAA
1 CCCTAAA
12448 CCCTAAA
1 CCCTAAA
12455 CCCTAAA
1 CCCTAAA
12462 CCCTAAA
1 CCCTAAA
12469 CCCTAAA
1 CCCTAAA
12476 CCCTAAA
1 CCCTAAA
12483 CCCTAAA
1 CCCTAAA
12490 CCCTAAA
1 CCCTAAA
12497 CCCTAAA
1 CCCTAAA
12504 CCCT-AA
1 CCCTAAA
12510 CCCTAAA
1 CCCTAAA
12517 CCCTAAA
1 CCCTAAA
12524 CCCTAAA
1 CCCTAAA
12531 CCCTAAA
1 CCCTAAA
12538 CCCTAAA
1 CCCTAAA
12545 CCCTAAA
1 CCCTAAA
12552 CCCTAAA
1 CCCTAAA
12559 CCCTAAA
1 CCCTAAA
12566 CCCTAAA
1 CCCTAAA
12573 CCCTAAA
1 CCCTAAA
12580 CCCTAAA
1 CCCTAAA
12587 CCCTAAA
1 CCCTAAA
12594 CCCTAAA
1 CCCTAAA
12601 CCCTAAA
1 CCCTAAA
12608 CCCTAAA
1 CCCTAAA
12615 CCCTAAA
1 CCCTAAA
12622 CCCTAAA
1 CCCTAAA
12629 CCCTAAA
1 CCCTAAA
12636 CCCTAAA
1 CCCTAAA
12643 CCCTAAA
1 CCCTAAA
12650 CCCTAAA
1 CCCTAAA
12657 CCCT-AA
1 CCCTAAA
12663 CCCTAAA
1 CCCTAAA
12670 CCCTAAA
1 CCCTAAA
12677 CCCTAAA
1 CCCTAAA
12684 CCCTAAA
1 CCCTAAA
12691 CCCTAAA
1 CCCTAAA
12698 CCCTAAA
1 CCCTAAA
12705 CCCTAAA
1 CCCTAAA
12712 -CCTAAA
1 CCCTAAA
12718 CCCTAAA
1 CCCTAAA
12725 CCCTAAA
1 CCCTAAA
12732 CCCTAAA
1 CCCTAAA
12739 CCCTAAA
1 CCCTAAA
12746 CCCTAAA
1 CCCTAAA
12753 CCCTAAA
1 CCCTAAA
12760 CCCTAAA
1 CCCTAAA
12767 CCCTAAA
1 CCCTAAA
12774 CCCT-AA
1 CCCTAAA
12780 CCCTAAA
1 CCCTAAA
12787 CCCTAAA
1 CCCTAAA
12794 CCCTAAA
1 CCCTAAA
12801 CCCTAAA
1 CCCTAAA
12808 -CCTAAA
1 CCCTAAA
12814 CCCTAAA
1 CCCTAAA
12821 CCCTAAA
1 CCCTAAA
12828 CCCTAAA
1 CCCTAAA
12835 CCCTAAA
1 CCCTAAA
12842 CCCTAAA
1 CCCTAAA
12849 CCCTAAA
1 CCCTAAA
12856 CCCTAAA
1 CCCTAAA
12863 CCCTAAA
1 CCCTAAA
12870 CCCTAAA
1 CCCTAAA
12877 CCCTAAA
1 CCCTAAA
12884 CCCTAAA
1 CCCTAAA
12891 CCCTAAA
1 CCCTAAA
12898 CCCTAAA
1 CCCTAAA
12905 CCCTAAA
1 CCCTAAA
12912 CCCTAAA
1 CCCTAAA
12919 CCCTAAA
1 CCCTAAA
12926 CCCTAAA
1 CCCTAAA
12933 CCCTAAA
1 CCCTAAA
12940 CCCT-AA
1 CCCTAAA
12946 CCCTAAA
1 CCCTAAA
12953 CCCTAAA
1 CCCTAAA
12960 CCCTAAA
1 CCCTAAA
12967 CCCTAAA
1 CCCTAAA
12974 CCCTAAA
1 CCCTAAA
12981 CCCTAAA
1 CCCTAAA
12988 CCCTAAA
1 CCCTAAA
12995 CCCTAAA
1 CCCTAAA
13002 CCCTAAA
1 CCCTAAA
13009 CCCTAAA
1 CCCTAAA
13016 CCCTAAA
1 CCCTAAA
13023 CCCTAAA
1 CCCTAAA
13030 CCCTAAA
1 CCCTAAA
13037 CCCTAAA
1 CCCTAAA
13044 CCCTAAA
1 CCCTAAA
13051 CCCTAAA
1 CCCTAAA
13058 CCCTAAA
1 CCCTAAA
13065 CCCT-AA
1 CCCTAAA
13071 CCCTAAA
1 CCCTAAA
13078 CCCTAAA
1 CCCTAAA
13085 CCCTAAA
1 CCCTAAA
13092 CCCTAAA
1 CCCTAAA
13099 CCCTAAA
1 CCCTAAA
13106 CCCTAAA
1 CCCTAAA
13113 CCCTAAA
1 CCCTAAA
13120 CCCTAAA
1 CCCTAAA
13127 CCCTAAA
1 CCCTAAA
13134 CCCTAAA
1 CCCTAAA
13141 CCCTAAA
1 CCCTAAA
13148 CCCTAAA
1 CCCTAAA
13155 CCCTAAA
1 CCCTAAA
13162 CCCTAAA
1 CCCTAAA
13169 CCCTAAA
1 CCCTAAA
13176 CCCTAAA
1 CCCTAAA
13183 CCCTAAA
1 CCCTAAA
13190 CCC-AAA
1 CCCTAAA
13196 CCCTAAA
1 CCCTAAA
13203 CCCTAAAAAA
1 CCCT---AAA
13213 CCCTAAA
1 CCCTAAA
13220 CCCTAAA
1 CCCTAAA
13227 CCCTAAA
1 CCCTAAA
13234 CCCTAAA
1 CCCTAAA
13241 CCCTAAA
1 CCCTAAA
13248 CCCTAAA
1 CCCTAAA
13255 CCCTAAA
1 CCCTAAA
13262 CCCTAAA
1 CCCTAAA
13269 CCCT-AA
1 CCCTAAA
13275 CCCTAAA
1 CCCTAAA
13282 CCCTAAA
1 CCCTAAA
13289 CCCT-AA
1 CCCTAAA
13295 CCCTAAA
1 CCCTAAA
13302 CCCTAAA
1 CCCTAAA
13309 CCCTAAA
1 CCCTAAA
13316 CCCTAAA
1 CCCTAAA
13323 CCCTAAA
1 CCCTAAA
13330 CCCTAAA
1 CCCTAAA
13337 CCCTAAA
1 CCCTAAA
13344 CCCTAAA
1 CCCTAAA
13351 CCCTAAA
1 CCCTAAA
13358 CCCTAAA
1 CCCTAAA
13365 CCCTAAA
1 CCCTAAA
13372 CCCTAAA
1 CCCTAAA
13379 CCCTAAA
1 CCCTAAA
13386 CCCTAAA
1 CCCTAAA
13393 CCCTAAA
1 CCCTAAA
13400 CCCTAAA
1 CCCTAAA
13407 CCCTAAA
1 CCCTAAA
13414 CCCTAAA
1 CCCTAAA
13421 CCCTAAA
1 CCCTAAA
13428 CCCTAAA
1 CCCTAAA
13435 CCCTAAA
1 CCCTAAA
13442 CCCTAAA
1 CCCTAAA
13449 CCCTAAA
1 CCCTAAA
13456 CCCTAAA
1 CCCTAAA
13463 CCCTAAA
1 CCCTAAA
13470 CCCTAAA
1 CCCTAAA
13477 CCCTAAA
1 CCCTAAA
13484 CCCTAAA
1 CCCTAAA
13491 CCCTAAA
1 CCCTAAA
13498 CCCTAAA
1 CCCTAAA
13505 CCCT-AA
1 CCCTAAA
13511 CCCTAAA
1 CCCTAAA
13518 CCCTAAA
1 CCCTAAA
13525 CCCTAAA
1 CCCTAAA
13532 CCCTAAA
1 CCCTAAA
13539 CCCTAAA
1 CCCTAAA
13546 CCCTAAA
1 CCCTAAA
13553 CCCTAAA
1 CCCTAAA
13560 CCCTAAA
1 CCCTAAA
13567 CCCTAAA
1 CCCTAAA
13574 CCCTAAA
1 CCCTAAA
13581 CCCTAAA
1 CCCTAAA
13588 CCCTAAA
1 CCCTAAA
13595 CCCTAAA
1 CCCTAAA
13602 CCCTAAA
1 CCCTAAA
13609 CCCTAAA
1 CCCTAAA
13616 CCCTAAA
1 CCCTAAA
13623 CCCTAAA
1 CCCTAAA
13630 CCCTAAA
1 CCCTAAA
13637 CCCTAAA
1 CCCTAAA
13644 CCCTAAA
1 CCCTAAA
13651 CCCTAAA
1 CCCTAAA
13658 CCCTAAA
1 CCCTAAA
13665 CCCTAAA
1 CCCTAAA
13672 CCCTAAA
1 CCCTAAA
13679 CCCTAAA
1 CCCTAAA
13686 CCCTAAA
1 CCCTAAA
13693 CCCTAAA
1 CCCTAAA
13700 CCCTAAA
1 CCCTAAA
13707 CCCTAAA
1 CCCTAAA
13714 CCCTAAA
1 CCCTAAA
13721 CCCTAAA
1 CCCTAAA
13728 CCCTAAA
1 CCCTAAA
13735 CCCTAAA
1 CCCTAAA
13742 CCCTAAA
1 CCCTAAA
13749 CCCTAAA
1 CCCTAAA
13756 CCCTAAA
1 CCCTAAA
13763 CCCTAAA
1 CCCTAAA
13770 CCCTAAA
1 CCCTAAA
13777 CCCTAAA
1 CCCTAAA
13784 CCCTAAA
1 CCCTAAA
13791 CCCTAAA
1 CCCTAAA
13798 CCCTAAA
1 CCCTAAA
13805 CCCTAAA
1 CCCTAAA
13812 CCCTAAA
1 CCCTAAA
13819 CCCTAAA
1 CCCTAAA
13826 CCCTAAA
1 CCCTAAA
13833 CCCTAAA
1 CCCTAAA
13840 CCCTAAA
1 CCCTAAA
13847 CCCTAAA
1 CCCTAAA
13854 CCCTAAA
1 CCCTAAA
13861 CCCTAAA
1 CCCTAAA
13868 CCCTAAA
1 CCCTAAA
13875 CCCTAAA
1 CCCTAAA
13882 CCCTAAA
1 CCCTAAA
13889 CCCTAAA
1 CCCTAAA
13896 CCCTAAA
1 CCCTAAA
13903 CCCTAAA
1 CCCTAAA
13910 CCCTAAA
1 CCCTAAA
13917 CCCTAAA
1 CCCTAAA
13924 CCCTAAA
1 CCCTAAA
13931 CCCTAAA
1 CCCTAAA
13938 CCCTAAA
1 CCCTAAA
13945 CCCTAAA
1 CCCTAAA
13952 CCCTAAA
1 CCCTAAA
13959 CCCTAAA
1 CCCTAAA
13966 CCCTAAA
1 CCCTAAA
13973 CCCTAAA
1 CCCTAAA
13980 CCCTAAA
1 CCCTAAA
13987 CCCTAAA
1 CCCTAAA
13994 CCCTAAA
1 CCCTAAA
14001 CCCTAAA
1 CCCTAAA
14008 CCCTAAA
1 CCCTAAA
14015 -CCTAAA
1 CCCTAAA
14021 CCCTAAA
1 CCCTAAA
14028 CCCTAAA
1 CCCTAAA
14035 CCCTAAA
1 CCCTAAA
14042 CCCTAAA
1 CCCTAAA
14049 CCCTAAA
1 CCCTAAA
14056 CCCTAAA
1 CCCTAAA
14063 CCCTAAA
1 CCCTAAA
14070 CCCTAAA
1 CCCTAAA
14077 CCCTAAA
1 CCCTAAA
14084 CCCTAAA
1 CCCTAAA
14091 CCCTAAA
1 CCCTAAA
14098 CCCTAAA
1 CCCTAAA
14105 CCCTAAA
1 CCCTAAA
14112 CCCTAAA
1 CCCTAAA
14119 CCCTAAA
1 CCCTAAA
14126 CCCTAAA
1 CCCTAAA
14133 CCC
1 CCC
14136 CGAGCCCCGA
Statistics
Matches: 13691, Mismatches: 87, Indels: 700
0.95 0.01 0.05
Matches are distributed among these distances:
4 5 0.00
5 110 0.01
6 1376 0.10
7 11812 0.86
8 286 0.02
9 68 0.00
10 24 0.00
11 10 0.00
ACGTcount: A:0.39, C:0.42, G:0.05, T:0.14
Consensus pattern (7 bp):
CCCTAAA
Found at i:14143 original size:7 final size:7
Alignment explanation
Indices: 14133--14466 Score: 654
Period size: 7 Copynumber: 48.0 Consensus size: 7
14123 AAACCCTAAA
14133 CCCCGAG
1 CCCCGAG
14140 CCCCGAG
1 CCCCGAG
14147 CCCCGAG
1 CCCCGAG
14154 CCCCGAG
1 CCCCGAG
14161 CCCCGAG
1 CCCCGAG
14168 CCCCGAG
1 CCCCGAG
14175 CCCCGAG
1 CCCCGAG
14182 CCCCGAG
1 CCCCGAG
14189 CCCCGAG
1 CCCCGAG
14196 CCCCGAG
1 CCCCGAG
14203 CCCCGAG
1 CCCCGAG
14210 CCCCGAG
1 CCCCGAG
14217 CCCCGAG
1 CCCCGAG
14224 CCCCGAG
1 CCCCGAG
14231 CCCCGAG
1 CCCCGAG
14238 CCCCGAG
1 CCCCGAG
14245 -CCCGAG
1 CCCCGAG
14251 CCCCGAG
1 CCCCGAG
14258 CCCCGAG
1 CCCCGAG
14265 CCCCGAG
1 CCCCGAG
14272 CCCCGAG
1 CCCCGAG
14279 CCCCGAG
1 CCCCGAG
14286 CCCCGAG
1 CCCCGAG
14293 CCCCGAG
1 CCCCGAG
14300 CCCCGAG
1 CCCCGAG
14307 CCCCGAG
1 CCCCGAG
14314 CCCCGAG
1 CCCCGAG
14321 CCCCGAG
1 CCCCGAG
14328 CCCCGAG
1 CCCCGAG
14335 CCCCGAG
1 CCCCGAG
14342 CCCCGAG
1 CCCCGAG
14349 CCCCGAG
1 CCCCGAG
14356 CCCCGAG
1 CCCCGAG
14363 CCCCGAG
1 CCCCGAG
14370 CCCCGAG
1 CCCCGAG
14377 CCCCGAG
1 CCCCGAG
14384 CCCCGAG
1 CCCCGAG
14391 CCCCGAG
1 CCCCGAG
14398 CCCCGAG
1 CCCCGAG
14405 CCCCGAG
1 CCCCGAG
14412 CCCCGAG
1 CCCCGAG
14419 CCCCGAG
1 CCCCGAG
14426 CCCCGAG
1 CCCCGAG
14433 -CCCGAG
1 CCCCGAG
14439 CCCCGAG
1 CCCCGAG
14446 CCCCGAG
1 CCCCGAG
14453 CCCCGAG
1 CCCCGAG
14460 CCCCGAG
1 CCCCGAG
14467 AAATCACAAA
Statistics
Matches: 325, Mismatches: 0, Indels: 4
0.99 0.00 0.01
Matches are distributed among these distances:
6 12 0.04
7 313 0.96
ACGTcount: A:0.14, C:0.57, G:0.29, T:0.00
Consensus pattern (7 bp):
CCCCGAG
Found at i:14566 original size:18 final size:18
Alignment explanation
Indices: 14474--14616 Score: 77
Period size: 17 Copynumber: 8.2 Consensus size: 18
14464 GAGAAATCAC
*
14474 AAAACCCTAT-AACCTTA
1 AAAACTCTATAAACCTTA
* * *
14491 CAAA-TCCTACAAACCCT-
1 AAAACT-CTATAAACCTTA
*
14508 AAAACTCTATAAACCCTA
1 AAAACTCTATAAACCTTA
* *
14526 GAAA-TCCTAATAATCC-TA
1 AAAACT-CT-ATAAACCTTA
*
14544 GAAACTCTATAAACCTTA
1 AAAACTCTATAAACCTTA
* *
14562 AAAAC-CATAGAAATCTTA
1 AAAACTC-TATAAACCTTA
*
14580 AAAAC-CTAAAAACCTT-
1 AAAACTCTATAAACCTTA
* *
14596 AAAACTATATAAACCATA
1 AAAACTCTATAAACCTTA
14614 AAA
1 AAA
14617 TCATAGAAAC
Statistics
Matches: 98, Mismatches: 17, Indels: 21
0.72 0.12 0.15
Matches are distributed among these distances:
16 5 0.05
17 43 0.44
18 43 0.44
19 7 0.07
ACGTcount: A:0.51, C:0.24, G:0.02, T:0.22
Consensus pattern (18 bp):
AAAACTCTATAAACCTTA
Found at i:14626 original size:26 final size:26
Alignment explanation
Indices: 14542--14637 Score: 90
Period size: 26 Copynumber: 3.7 Consensus size: 26
14532 CTAATAATCC
* *
14542 TAGAAACTCTATAAACCTTAAAAACCA
1 TAGAAACTATAAAAACC-TAAAAACCA
*
14569 TAGAAATCT-TAAAAACCTAAAAACCT
1 TAGAAA-CTATAAAAACCTAAAAACCA
* *
14595 TA-AAACTATATAAACC-ATAAAATCA
1 TAGAAACTATAAAAACCTA-AAAACCA
*
14620 TAGAAACCATAAAAACCT
1 TAGAAACTATAAAAACCT
14638 TATAAACACC
Statistics
Matches: 57, Mismatches: 7, Indels: 10
0.77 0.09 0.14
Matches are distributed among these distances:
24 3 0.05
25 17 0.30
26 22 0.39
27 13 0.23
28 2 0.04
ACGTcount: A:0.55, C:0.20, G:0.03, T:0.22
Consensus pattern (26 bp):
TAGAAACTATAAAAACCTAAAAACCA
Found at i:14635 original size:9 final size:9
Alignment explanation
Indices: 14554--14636 Score: 64
Period size: 9 Copynumber: 9.6 Consensus size: 9
14544 GAAACTCTAT
*
14554 AAACCTTAA
1 AAACCATAA
*
14563 AAACCATAG
1 AAACCATAA
* *
14572 AAATCTTAA
1 AAACCATAA
14581 AAACC-TAA
1 AAACCATAA
*
14589 AAACC-TTA
1 AAACCATAA
* *
14597 AAACTATAT
1 AAACCATAA
14606 AAACCAT-A
1 AAACCATAA
* *
14614 AAATCATAG
1 AAACCATAA
14623 AAACCATAA
1 AAACCATAA
14632 AAACC
1 AAACC
14637 TTATAAACAC
Statistics
Matches: 56, Mismatches: 16, Indels: 4
0.74 0.21 0.05
Matches are distributed among these distances:
8 20 0.36
9 36 0.64
ACGTcount: A:0.58, C:0.20, G:0.02, T:0.19
Consensus pattern (9 bp):
AAACCATAA
Found at i:14764 original size:47 final size:46
Alignment explanation
Indices: 14677--14906 Score: 140
Period size: 47 Copynumber: 4.8 Consensus size: 46
14667 TAAATCCTAG
* * * ** * *
14677 AAACCCTAAACCTTAACAAATCATAGCAAACCTTATTAAACCCAAT
1 AAACCCTAAACCCTAATAAACCATAATAAACCCTAATAAACCCAAT
* * * ** *
14723 AAACCCTAGTAA-CCTATTAAACTATAGTAAACCCTGGTAAACCCTAAC
1 AAACCCTA--AACCCTAATAAACCATAATAAACCCTAATAAACCC-AAT
* *
14771 AAACTCTAAACCCTAATAAACCATAATAAACCCTAATAAACCATAAT
1 AAACCCTAAACCCTAATAAACCATAATAAACCCTAATAAACC-CAAT
* ** *
14818 AAACCCTGATAAACCTTAATAAA-CACTTGTAAACCCTAATAAACCCTAGT
1 AAACCC---TAAACCCTAATAAACCA-TAATAAACCCTAATAAACCC-AAT
* * *
14868 AAACTCTAATACACTCTAATAAACCCTAGTAAACCCTAA
1 AAACCCTAA-AC-C-CTAATAAACCATAATAAACCCTAA
14907 CCTCAAAAAA
Statistics
Matches: 142, Mismatches: 28, Indels: 24
0.73 0.14 0.12
Matches are distributed among these distances:
46 10 0.07
47 59 0.42
48 13 0.09
49 3 0.02
50 56 0.39
51 1 0.01
ACGTcount: A:0.47, C:0.27, G:0.04, T:0.23
Consensus pattern (46 bp):
AAACCCTAAACCCTAATAAACCATAATAAACCCTAATAAACCCAAT
Found at i:14774 original size:10 final size:10
Alignment explanation
Indices: 14713--14906 Score: 157
Period size: 10 Copynumber: 20.0 Consensus size: 10
14703 CAAACCTTAT
14713 TAAACCC-AA
1 TAAACCCTAA
*
14722 TAAACCCTAG
1 TAAACCCTAA
*
14732 T-AA-CCTAT
1 TAAACCCTAA
** *
14740 TAAACTATAG
1 TAAACCCTAA
**
14750 TAAACCCTGG
1 TAAACCCTAA
14760 TAAACCCTAA
1 TAAACCCTAA
* *
14770 CAAA--CT-C
1 TAAACCCTAA
14777 TAAACCCTAA
1 TAAACCCTAA
*
14787 TAAACCATAA
1 TAAACCCTAA
14797 TAAACCCTAA
1 TAAACCCTAA
*
14807 TAAACCATAA
1 TAAACCCTAA
*
14817 TAAACCCTGA
1 TAAACCCTAA
*
14827 TAAACCTTAA
1 TAAACCCTAA
* **
14837 TAAACACTTG
1 TAAACCCTAA
14847 TAAACCCTAA
1 TAAACCCTAA
*
14857 TAAACCCTAG
1 TAAACCCTAA
*
14867 TAAACTCTAA
1 TAAACCCTAA
* *
14877 TACACTCTAA
1 TAAACCCTAA
*
14887 TAAACCCTAG
1 TAAACCCTAA
14897 TAAACCCTAA
1 TAAACCCTAA
14907 CCTCAAAAAA
Statistics
Matches: 143, Mismatches: 36, Indels: 11
0.75 0.19 0.06
Matches are distributed among these distances:
7 3 0.02
8 7 0.05
9 13 0.09
10 120 0.84
ACGTcount: A:0.46, C:0.27, G:0.04, T:0.23
Consensus pattern (10 bp):
TAAACCCTAA
Found at i:15565 original size:99 final size:99
Alignment explanation
Indices: 15431--15635 Score: 383
Period size: 99 Copynumber: 2.1 Consensus size: 99
15421 CCTTTTAAAA
*
15431 ATTTGAGGAAATTGTTTAAGGATCTTCTTAGGTACTAAACAAAAACTCTCGTTTTCTTTATTTAT
1 ATTTGAGGAAATTGTTCAAGGATCTTCTTAGGTACTAAACAAAAACTCTCGTTTTCTTTATTTAT
15496 CGAAATTCATGTTAATCATGATTTTTTGTATTGC
66 CGAAATTCATGTTAATCATGATTTTTTGTATTGC
* *
15530 ATTTGAGGAAATTGTTCGAGGATCTTGTTAGGTACTAAACAAAAACTCTCGTTTTCTTTATTTAT
1 ATTTGAGGAAATTGTTCAAGGATCTTCTTAGGTACTAAACAAAAACTCTCGTTTTCTTTATTTAT
15595 CGAAATTCATGTTAATCATGATTTTTTGTATTGC
66 CGAAATTCATGTTAATCATGATTTTTTGTATTGC
15629 ATTTGAG
1 ATTTGAG
15636 TGGATGGCTG
Statistics
Matches: 103, Mismatches: 3, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
99 103 1.00
ACGTcount: A:0.29, C:0.12, G:0.16, T:0.44
Consensus pattern (99 bp):
ATTTGAGGAAATTGTTCAAGGATCTTCTTAGGTACTAAACAAAAACTCTCGTTTTCTTTATTTAT
CGAAATTCATGTTAATCATGATTTTTTGTATTGC
Found at i:25126 original size:2 final size:2
Alignment explanation
Indices: 25121--25147 Score: 54
Period size: 2 Copynumber: 13.5 Consensus size: 2
25111 TTATTCTTAT
25121 TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA T
25148 TAATTATCTT
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 25 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:25219 original size:40 final size:43
Alignment explanation
Indices: 25175--25266 Score: 122
Period size: 43 Copynumber: 2.2 Consensus size: 43
25165 ATATTTTTTT
*
25175 TATATATTTTTTAATT-TTT-T-ATAT-TCTATCGTTATTTATA
1 TATATATTTTTTAATTCTTTGTCATATATC-ATCATTATTTATA
*
25215 TATATATTTTTTAATTCTTTGTCATATATCATTATTATTTATA
1 TATATATTTTTTAATTCTTTGTCATATATCATCATTATTTATA
25258 TATAT-TTTT
1 TATATATTTT
25267 ATTACTATAA
Statistics
Matches: 46, Mismatches: 2, Indels: 6
0.85 0.04 0.11
Matches are distributed among these distances:
40 16 0.35
41 3 0.07
42 5 0.11
43 20 0.43
44 2 0.04
ACGTcount: A:0.28, C:0.05, G:0.02, T:0.64
Consensus pattern (43 bp):
TATATATTTTTTAATTCTTTGTCATATATCATCATTATTTATA
Found at i:25267 original size:40 final size:39
Alignment explanation
Indices: 25171--25267 Score: 108
Period size: 40 Copynumber: 2.5 Consensus size: 39
25161 TTGGATATTT
* * *
25171 TTTTTATATAT-TTTTTAATTTTTTATATTCTATCGTTA
1 TTTTTATATATATTTTTAATTCTTTATATTATATCATTA
* *
25209 TTTATATATATATTTTTTAATTCTTTGTCA-TATATCATTA
1 TTTTTATATATA-TTTTTAATTCTTTAT-ATTATATCATTA
25249 TTATTTATATATATTTTTA
1 TT-TTTATATATATTTTTA
25268 TTACTATAAT
Statistics
Matches: 49, Mismatches: 6, Indels: 6
0.80 0.10 0.10
Matches are distributed among these distances:
38 10 0.20
40 29 0.59
41 10 0.20
ACGTcount: A:0.28, C:0.05, G:0.02, T:0.65
Consensus pattern (39 bp):
TTTTTATATATATTTTTAATTCTTTATATTATATCATTA
Found at i:25275 original size:16 final size:15
Alignment explanation
Indices: 25238--25311 Score: 60
Period size: 16 Copynumber: 4.7 Consensus size: 15
25228 ATTCTTTGTC
*
25238 ATATATCATTATTATTT
1 ATATAT-ATTTTTA-TT
25255 ATATATATTTTTATT
1 ATATATATTTTTATT
* *
25270 ACTATA-ATTATATGTT
1 A-TATATATT-TTTATT
25286 ATATATATTTATTATT
1 ATATATATTT-TTATT
*
25302 TTATATATTT
1 ATATATATTT
25312 CATTTTATCT
Statistics
Matches: 47, Mismatches: 6, Indels: 9
0.76 0.10 0.15
Matches are distributed among these distances:
15 11 0.23
16 30 0.64
17 6 0.13
ACGTcount: A:0.35, C:0.03, G:0.01, T:0.61
Consensus pattern (15 bp):
ATATATATTTTTATT
Found at i:25334 original size:15 final size:15
Alignment explanation
Indices: 25314--25345 Score: 55
Period size: 15 Copynumber: 2.1 Consensus size: 15
25304 ATATATTTCA
*
25314 TTTTATCTTTTATTT
1 TTTTATCTTCTATTT
25329 TTTTATCTTCTATTT
1 TTTTATCTTCTATTT
25344 TT
1 TT
25346 ATTTTTGTAT
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 16 1.00
ACGTcount: A:0.12, C:0.09, G:0.00, T:0.78
Consensus pattern (15 bp):
TTTTATCTTCTATTT
Found at i:25356 original size:14 final size:15
Alignment explanation
Indices: 25339--25396 Score: 50
Period size: 14 Copynumber: 3.8 Consensus size: 15
25329 TTTTATCTTC
25339 TATTTTTATTTT-TG
1 TATTTTTATTTTATG
*
25353 TATTGTTATTGTTAT-
1 TATTTTTATT-TTATG
25368 TATCTTCTTTATTTTATG
1 TA--TT-TTTATTTTATG
25386 TA-TTTTATTTT
1 TATTTTTATTTT
25397 TATATATATT
Statistics
Matches: 36, Mismatches: 2, Indels: 12
0.72 0.04 0.24
Matches are distributed among these distances:
14 17 0.47
15 5 0.14
16 1 0.03
17 6 0.17
18 7 0.19
ACGTcount: A:0.17, C:0.03, G:0.07, T:0.72
Consensus pattern (15 bp):
TATTTTTATTTTATG
Found at i:25362 original size:20 final size:20
Alignment explanation
Indices: 25315--25368 Score: 56
Period size: 21 Copynumber: 2.6 Consensus size: 20
25305 TATATTTCAT
*
25315 TTTATCTTTTATTTTTTTATC
1 TTTAT-TTTTATTTTTGTATC
25336 TTCTATTTTTATTTTTGTAT-
1 TT-TATTTTTATTTTTGTATC
*
25356 TGTTATTGTTATT
1 T-TTATTTTTATT
25369 ATCTTCTTTA
Statistics
Matches: 29, Mismatches: 2, Indels: 5
0.81 0.06 0.14
Matches are distributed among these distances:
20 10 0.34
21 16 0.55
22 3 0.10
ACGTcount: A:0.15, C:0.06, G:0.06, T:0.74
Consensus pattern (20 bp):
TTTATTTTTATTTTTGTATC
Found at i:25412 original size:33 final size:32
Alignment explanation
Indices: 25341--25418 Score: 95
Period size: 32 Copynumber: 2.4 Consensus size: 32
25331 TTATCTTCTA
*
25341 TTTTTATTTTTGTATTGTTATTGTTATTATCT
1 TTTTTATTTTTGTATTGTTATTGTTATTATAT
* *
25373 TCTTTATTTTATGTATT-TTATTTTTATATATAT
1 TTTTTATTTT-TGTATTGTTATTGTTAT-TATAT
*
25406 TTTTTATATTTGT
1 TTTTTATTTTTGT
25419 TTTTGTTCCT
Statistics
Matches: 39, Mismatches: 5, Indels: 4
0.81 0.10 0.08
Matches are distributed among these distances:
32 21 0.54
33 18 0.46
ACGTcount: A:0.19, C:0.03, G:0.06, T:0.72
Consensus pattern (32 bp):
TTTTTATTTTTGTATTGTTATTGTTATTATAT
Found at i:38003 original size:2 final size:2
Alignment explanation
Indices: 37945--37986 Score: 77
Period size: 2 Copynumber: 21.5 Consensus size: 2
37935 ATTCTATCGT
37945 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T- TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
37986 T
1 T
37987 TTTTTACTAT
Statistics
Matches: 39, Mismatches: 0, Indels: 2
0.95 0.00 0.05
Matches are distributed among these distances:
1 1 0.03
2 38 0.97
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:38053 original size:15 final size:15
Alignment explanation
Indices: 38033--38064 Score: 64
Period size: 15 Copynumber: 2.1 Consensus size: 15
38023 TTATATTTCA
38033 TTTTATCTTTTATTT
1 TTTTATCTTTTATTT
38048 TTTTATCTTTTATTT
1 TTTTATCTTTTATTT
38063 TT
1 TT
38065 ATTTTTGTAT
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 17 1.00
ACGTcount: A:0.12, C:0.06, G:0.00, T:0.81
Consensus pattern (15 bp):
TTTTATCTTTTATTT
Found at i:38080 original size:20 final size:21
Alignment explanation
Indices: 38035--38087 Score: 63
Period size: 21 Copynumber: 2.5 Consensus size: 21
38025 ATATTTCATT
* *
38035 TTATCTTTTATTTTTTTATCTT
1 TTAT-TTTTATTTTTGTATCTG
38057 TTATTTTTATTTTTGTAT-TG
1 TTATTTTTATTTTTGTATCTG
*
38077 TTATTGTTATT
1 TTATTTTTATT
38088 ATCTTCTTTA
Statistics
Matches: 28, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
20 11 0.39
21 13 0.46
22 4 0.14
ACGTcount: A:0.15, C:0.04, G:0.06, T:0.75
Consensus pattern (21 bp):
TTATTTTTATTTTTGTATCTG
Found at i:38131 original size:33 final size:32
Alignment explanation
Indices: 38060--38137 Score: 88
Period size: 32 Copynumber: 2.4 Consensus size: 32
38050 TTATCTTTTA
*
38060 TTTTTATTTTTGTATTGTTATTGTTATTATCT
1 TTTTTATTTTTGTATTGTTATTGTTATTATAT
*
38092 TCTTTATTTTATGTATT-TTATT-TATATATATAT
1 TTTTTATTTT-TGTATTGTTATTGT-TAT-TATAT
*
38125 TTTTTATATTTGT
1 TTTTTATTTTTGT
38138 TTTTGTGCCT
Statistics
Matches: 39, Mismatches: 4, Indels: 6
0.80 0.08 0.12
Matches are distributed among these distances:
31 1 0.03
32 20 0.51
33 18 0.46
ACGTcount: A:0.21, C:0.03, G:0.06, T:0.71
Consensus pattern (32 bp):
TTTTTATTTTTGTATTGTTATTGTTATTATAT
Found at i:38249 original size:28 final size:29
Alignment explanation
Indices: 38191--38250 Score: 68
Period size: 28 Copynumber: 2.1 Consensus size: 29
38181 TCTTTATATG
* *
38191 TTTTATTTTCTCTACTTTATTGCATTTAT
1 TTTTATTTTCACTACTTTATTGCATTCAT
* **
38220 TTTTA-TTTCACTTCTTTATTTTATTCAT
1 TTTTATTTTCACTACTTTATTGCATTCAT
38248 TTT
1 TTT
38251 CACTATATTT
Statistics
Matches: 26, Mismatches: 5, Indels: 1
0.81 0.16 0.03
Matches are distributed among these distances:
28 21 0.81
29 5 0.19
ACGTcount: A:0.17, C:0.13, G:0.02, T:0.68
Consensus pattern (29 bp):
TTTTATTTTCACTACTTTATTGCATTCAT
Found at i:41293 original size:14 final size:14
Alignment explanation
Indices: 41274--41317 Score: 70
Period size: 14 Copynumber: 3.1 Consensus size: 14
41264 TTTAGATTTT
*
41274 TTAAAATTACATTA
1 TTAAAAATACATTA
*
41288 TTAAAAATATATTA
1 TTAAAAATACATTA
41302 TTAAAAATACATTA
1 TTAAAAATACATTA
41316 TT
1 TT
41318 GATAATTATA
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
14 27 1.00
ACGTcount: A:0.52, C:0.05, G:0.00, T:0.43
Consensus pattern (14 bp):
TTAAAAATACATTA
Found at i:41360 original size:30 final size:31
Alignment explanation
Indices: 41324--41381 Score: 109
Period size: 30 Copynumber: 1.9 Consensus size: 31
41314 TATTGATAAT
41324 TATAAAATTTTAAAAATAT-ATTAAAAATTC
1 TATAAAATTTTAAAAATATAATTAAAAATTC
41354 TATAAAATTTTAAAAATATAATTAAAAA
1 TATAAAATTTTAAAAATATAATTAAAAA
41382 AAATATGATT
Statistics
Matches: 27, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
30 19 0.70
31 8 0.30
ACGTcount: A:0.60, C:0.02, G:0.00, T:0.38
Consensus pattern (31 bp):
TATAAAATTTTAAAAATATAATTAAAAATTC
Found at i:41883 original size:27 final size:28
Alignment explanation
Indices: 41840--41911 Score: 69
Period size: 28 Copynumber: 2.6 Consensus size: 28
41830 CCTAAACCCT
*
41840 AACCACTATACACTAAA-CTATAAACA-TA
1 AACC-CTATACACTAAATC-ATAAACACAA
41868 AACCCTATAC-CATAAATCATAAACACAA
1 AACCCTATACAC-TAAATCATAAACACAA
* *
41896 AACCCTAAACTCTAAA
1 AACCCTATACACTAAA
41912 CATTAAATCT
Statistics
Matches: 38, Mismatches: 2, Indels: 8
0.79 0.04 0.17
Matches are distributed among these distances:
26 1 0.03
27 17 0.45
28 19 0.50
29 1 0.03
ACGTcount: A:0.53, C:0.28, G:0.00, T:0.19
Consensus pattern (28 bp):
AACCCTATACACTAAATCATAAACACAA
Found at i:41946 original size:21 final size:21
Alignment explanation
Indices: 41831--41946 Score: 58
Period size: 21 Copynumber: 5.6 Consensus size: 21
41821 GCAACGAGTC
*
41831 CTAAACCC-TAACCACTATACA
1 CTAAACCCTTAA-CACTAAACA
** * *
41852 CTAAACTATAAACA-TAAACC
1 CTAAACCCTTAACACTAAACA
* * *
41872 CTATACCATAAATCA-TAAACA
1 CTAAACCCTTAA-CACTAAACA
* * *
41893 CAAAACCCTAAACTCTAAACA
1 CTAAACCCTTAACACTAAACA
* * * *
41914 TTAAATCTTTAACACTAAACC
1 CTAAACCCTTAACACTAAACA
41935 CTAAACCCTTAA
1 CTAAACCCTTAA
41947 TTCAATTATG
Statistics
Matches: 70, Mismatches: 22, Indels: 6
0.71 0.22 0.06
Matches are distributed among these distances:
20 15 0.21
21 53 0.76
22 2 0.03
ACGTcount: A:0.48, C:0.29, G:0.00, T:0.22
Consensus pattern (21 bp):
CTAAACCCTTAACACTAAACA
Found at i:43161 original size:23 final size:23
Alignment explanation
Indices: 43135--43182 Score: 69
Period size: 23 Copynumber: 2.1 Consensus size: 23
43125 ATAAAGTACA
*
43135 ATAACATACTAGGTAGCGCTTAT
1 ATAACATAATAGGTAGCGCTTAT
**
43158 ATAATGTAATAGGTAGCGCTTAT
1 ATAACATAATAGGTAGCGCTTAT
43181 AT
1 AT
43183 TTATCTATTT
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
23 22 1.00
ACGTcount: A:0.35, C:0.12, G:0.19, T:0.33
Consensus pattern (23 bp):
ATAACATAATAGGTAGCGCTTAT
Found at i:43635 original size:23 final size:23
Alignment explanation
Indices: 43600--43672 Score: 92
Period size: 23 Copynumber: 3.2 Consensus size: 23
43590 ATACTTTACA
* * *
43600 ATATAACCACTACATATTACATT
1 ATATAAACGCTACCTATTACATT
43623 ATATAAACGCTACCTATTACATT
1 ATATAAACGCTACCTATTACATT
* * *
43646 ATATAAGCGCTACCTAATACATA
1 ATATAAACGCTACCTATTACATT
43669 ATAT
1 ATAT
43673 TTTTACCTAT
Statistics
Matches: 44, Mismatches: 6, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
23 44 1.00
ACGTcount: A:0.42, C:0.21, G:0.04, T:0.33
Consensus pattern (23 bp):
ATATAAACGCTACCTATTACATT
Found at i:43857 original size:30 final size:29
Alignment explanation
Indices: 43817--43883 Score: 73
Period size: 30 Copynumber: 2.2 Consensus size: 29
43807 TCATTTGCAC
* * *
43817 AAAAAATTATTT-GATTTTTTGATATTTTAT
1 AAAATATTATTTAGAATTTTT-A-ATTTAAT
43847 AAAATATTATTTAGAATTTTTAATTTAAT
1 AAAATATTATTTAGAATTTTTAATTTAAT
43876 AATAATAT
1 AA-AATAT
43884 ATATCGTAAC
Statistics
Matches: 32, Mismatches: 3, Indels: 4
0.82 0.08 0.10
Matches are distributed among these distances:
29 8 0.25
30 17 0.53
31 7 0.22
ACGTcount: A:0.43, C:0.00, G:0.04, T:0.52
Consensus pattern (29 bp):
AAAATATTATTTAGAATTTTTAATTTAAT
Found at i:44050 original size:429 final size:430
Alignment explanation
Indices: 43249--45592 Score: 4417
Period size: 429 Copynumber: 5.5 Consensus size: 430
43239 TATTACATTA
43249 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
1 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
*
43314 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTT
66 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
*
43379 ATTTGCACAAAAAATTATTTGATTGTTTTGATATTTTATAAAATAATATTTAGAATTTTTAATTT
131 ATTTGCACAAAAAATTATTTGATT-TTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTT
*
43444 AATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACTCCTATAATTACTAAATTAATAT
195 AATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATAT
*
43509 CTTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAATATGGACACT
260 CTTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACT
* * *
43574 TTTATAAAAAGGATAGATACTTTACAATATAACCACTACATATTACATTATATAAACGCTACCTA
325 TTTATAAAAAGGATAGACACTTTACAATATAACCACTACCTATTACATTATATAAACGATACCTA
* *
43639 TTACATTATATAAGCGCTACCTAATACATAATATTTTTACC
390 TTACATTATATAAGCGCTACCTATTACATCATATTTTTACC
43680 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
1 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
43745 TTATGTTTCAA-TTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
66 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
43809 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
131 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
43874 ATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATATC
196 ATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATATC
43939 TTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTT
261 TTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTT
*
44004 TTATAAAAAGGATAGACACTTTACAATATAACCATTACCTATTACATTATATAAACGATACCTAT
326 TTATAAAAAGGATAGACACTTTACAATATAACCACTACCTATTACATTATATAAACGATACCTAT
44069 TACATTATATAAGCGCTACCTATTACATCATATTTTTACC
391 TACATTATATAAGCGCTACCTATTACATCATATTTTTACC
* * *
44109 TATTATATTGAAAGTGTCGATACTTTTTATAAAAAGGATCGATACTTATTTTAAAATTATGTAAT
1 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
44174 TTATGTTTCAA-TTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
66 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
44238 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
131 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
44303 ATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATATC
196 ATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATATC
*
44368 TTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTTCACAGTGAAAAAAGTATGGACACTT
261 TTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTT
* *
44433 TTATAAAAAGGATAGACACTTTACAATATAACCACTACTTATTACATTATATAAACGATGCCTAT
326 TTATAAAAAGGATAGACACTTTACAATATAACCACTACCTATTACATTATATAAACGATACCTAT
44498 TACATTATATAAGCGCTACCTATTACATCATATTTTTACC
391 TACATTATATAAGCGCTACCTATTACATCATATTTTTACC
* *
44538 TATTATATTGAAAGTGTTCATACTTTTTATAAAAATGATCGATACTTCTTTTAAAGTTATGTAAT
1 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
*
44603 TTACGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
66 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
44668 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
131 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
44733 ATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATATC
196 ATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATATC
44798 TTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTT
261 TTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTT
44863 TTATAAAAAGGATAGACACTTTACAATATAACCACTACCTATTACATTATAT-AACGATACCTAT
326 TTATAAAAAGGATAGACACTTTACAATATAACCACTACCTATTACATTATATAAACGATACCTAT
44927 TACATTATATAAGCGCTACCTATTACATCATA-TTTTACC
391 TACATTATATAAGCGCTACCTATTACATCATATTTTTACC
*
44966 TATTATATTGAAAGTGTCCAAACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
1 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
45031 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
66 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
*
45096 ATTTGCACAAAAAATTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTTTTAATTT
131 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAA-TTTTTAATTT
45161 AATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATAT
195 AATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATAT
* *
45226 CTTAAAACTCACTCAAAGGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTACGGACACT
260 CTTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACT
45291 TTTATAAAAAGGATAGACACTTTACAATATAACCACTACCTATTACATTATATAAACGATACCTA
325 TTTATAAAAAGGATAGACACTTTACAATATAACCACTACCTATTACATTATATAAACGATACCTA
45356 TTACATTATATAAGCGCTACCTATTACATCATATTTTTACC
390 TTACATTATATAAGCGCTACCTATTACATCATATTTTTACC
*
45397 TATTATATTGAAAGTGTCCAAACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
1 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
45462 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
66 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
*
45527 ATTTGCACAAAAAATTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
131 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
45592 A
196 A
45593 CAACATTAAC
Statistics
Matches: 1876, Mismatches: 33, Indels: 9
0.98 0.02 0.00
Matches are distributed among these distances:
428 186 0.10
429 993 0.53
430 430 0.23
431 267 0.14
ACGTcount: A:0.39, C:0.12, G:0.08, T:0.41
Consensus pattern (430 bp):
TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
ATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATATC
TTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTT
TTATAAAAAGGATAGACACTTTACAATATAACCACTACCTATTACATTATATAAACGATACCTAT
TACATTATATAAGCGCTACCTATTACATCATATTTTTACC
Found at i:44054 original size:21 final size:20
Alignment explanation
Indices: 44024--44077 Score: 54
Period size: 23 Copynumber: 2.5 Consensus size: 20
44014 GATAGACACT
*
44024 TTACAATATAACCATTACCTA
1 TTACATTATAACCA-TACCTA
*
44045 TTACATTATATAAACGATACCTA
1 TTACA-T-TAT-AACCATACCTA
44068 TTACATTATA
1 TTACATTATA
44078 TAAGCGCTAC
Statistics
Matches: 28, Mismatches: 2, Indels: 7
0.76 0.05 0.19
Matches are distributed among these distances:
20 1 0.04
21 8 0.29
22 1 0.04
23 14 0.50
24 4 0.14
ACGTcount: A:0.43, C:0.19, G:0.02, T:0.37
Consensus pattern (20 bp):
TTACATTATAACCATACCTA
Found at i:44065 original size:23 final size:23
Alignment explanation
Indices: 44039--44101 Score: 99
Period size: 23 Copynumber: 2.7 Consensus size: 23
44029 ATATAACCAT
44039 TACCTATTACATTATATAAACGA
1 TACCTATTACATTATATAAACGA
* *
44062 TACCTATTACATTATATAAGCGC
1 TACCTATTACATTATATAAACGA
*
44085 TACCTATTACATCATAT
1 TACCTATTACATTATAT
44102 TTTTACCTAT
Statistics
Matches: 37, Mismatches: 3, Indels: 0
0.93 0.08 0.00
Matches are distributed among these distances:
23 37 1.00
ACGTcount: A:0.38, C:0.21, G:0.05, T:0.37
Consensus pattern (23 bp):
TACCTATTACATTATATAAACGA
Found at i:44286 original size:30 final size:29
Alignment explanation
Indices: 44246--44312 Score: 73
Period size: 30 Copynumber: 2.2 Consensus size: 29
44236 TCATTTGCAC
* * *
44246 AAAAAATTATTT-GATTTTTTGATATTTTAT
1 AAAATATTATTTAGAATTTTT-A-ATTTAAT
44276 AAAATATTATTTAGAATTTTTAATTTAAT
1 AAAATATTATTTAGAATTTTTAATTTAAT
44305 AATAATAT
1 AA-AATAT
44313 ATATCGTAAC
Statistics
Matches: 32, Mismatches: 3, Indels: 4
0.82 0.08 0.10
Matches are distributed among these distances:
29 8 0.25
30 17 0.53
31 7 0.22
ACGTcount: A:0.43, C:0.00, G:0.04, T:0.52
Consensus pattern (29 bp):
AAAATATTATTTAGAATTTTTAATTTAAT
Found at i:44498 original size:23 final size:23
Alignment explanation
Indices: 44472--44530 Score: 82
Period size: 23 Copynumber: 2.6 Consensus size: 23
44462 AACCACTACT
*
44472 TATTACATTATATAAACGATGCC
1 TATTACATTATATAAACGATACC
* *
44495 TATTACATTATATAAGCGCTACC
1 TATTACATTATATAAACGATACC
*
44518 TATTACATCATAT
1 TATTACATTATAT
44531 TTTTACCTAT
Statistics
Matches: 32, Mismatches: 4, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
23 32 1.00
ACGTcount: A:0.37, C:0.19, G:0.07, T:0.37
Consensus pattern (23 bp):
TATTACATTATATAAACGATACC
Found at i:44716 original size:30 final size:29
Alignment explanation
Indices: 44676--44742 Score: 73
Period size: 30 Copynumber: 2.2 Consensus size: 29
44666 TCATTTGCAC
* * *
44676 AAAAAATTATTT-GATTTTTTGATATTTTAT
1 AAAATATTATTTAGAATTTTT-A-ATTTAAT
44706 AAAATATTATTTAGAATTTTTAATTTAAT
1 AAAATATTATTTAGAATTTTTAATTTAAT
44735 AATAATAT
1 AA-AATAT
44743 ATATCGTAAC
Statistics
Matches: 32, Mismatches: 3, Indels: 4
0.82 0.08 0.10
Matches are distributed among these distances:
29 8 0.25
30 17 0.53
31 7 0.22
ACGTcount: A:0.43, C:0.00, G:0.04, T:0.52
Consensus pattern (29 bp):
AAAATATTATTTAGAATTTTTAATTTAAT
Found at i:44950 original size:23 final size:22
Alignment explanation
Indices: 44888--44959 Score: 99
Period size: 23 Copynumber: 3.2 Consensus size: 22
44878 ACACTTTACA
*
44888 ATATAACCACTACCTATTACATT
1 ATATAA-CGCTACCTATTACATT
*
44911 ATATAACGATACCTATTACATT
1 ATATAACGCTACCTATTACATT
*
44933 ATATAAGCGCTACCTATTACATC
1 ATATAA-CGCTACCTATTACATT
44956 ATAT
1 ATAT
44960 TTTACCTATT
Statistics
Matches: 44, Mismatches: 4, Indels: 2
0.88 0.08 0.04
Matches are distributed among these distances:
22 20 0.45
23 24 0.55
ACGTcount: A:0.39, C:0.22, G:0.04, T:0.35
Consensus pattern (22 bp):
ATATAACGCTACCTATTACATT
Found at i:45264 original size:859 final size:860
Alignment explanation
Indices: 43249--45592 Score: 4417
Period size: 859 Copynumber: 2.7 Consensus size: 860
43239 TATTACATTA
43249 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
1 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
*
43314 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTT
66 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
*
43379 ATTTGCACAAAAAATTATTTGATTGTTTTGATATTTTATAAAATAATATTTAGAATTTTTAATTT
131 ATTTGCACAAAAAATTATTTGATT-TTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTT
*
43444 AATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACTCCTATAATTACTAAATTAATAT
195 AATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATAT
*
43509 CTTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAATATGGACACT
260 CTTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACT
* *
43574 TTTATAAAAAGGATAGATACTTTACAATATAACCACTACATATTACATTATATAAACGCTACCTA
325 TTTATAAAAAGGATAGACACTTTACAATATAACCACTACATATTACATTATATAAACGATACCTA
* *
43639 TTACATTATATAAGCGCTACCTAATACATAATATTTTTACCTATTATATTGAAAGTGTCCATACT
390 TTACATTATATAAGCGCTACCTATTACATCATATTTTTACCTATTATATTGAAAGTGTCCATACT
43704 TTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAATTTATGTTTCAA-TTTTTTTAATAG
455 TTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAATTTATGTTTCAATTTTTTTTAATAG
43768 TGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTGCACAAAAAATTATTTGATT
520 TGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTGCACAAAAAATTATTTGATT
43833 TTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTAATAATAATATATATCGTAACGTAA
585 TTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTAATAATAATATATATCGTAACGTAA
43898 AAAATAAATCATTAGACGCCTATAATTACTAAATTAATATCTTAAAACTCACTCAAAAGATAACC
650 AAAATAAATCATTAGACGCCTATAATTACTAAATTAATATCTTAAAACTCACTCAAAAGATAACC
43963 TTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTTTTATAAAAAGGATAGACACTTTAC
715 TTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTTTTATAAAAAGGATAGACACTTTAC
*
44028 AATATAACCATTACCTATTACATTATATAAACGATACCTATTACATTATATAAGCGCTACCTATT
780 AATATAACCACTACCTATTACATTATATAAACGATACCTATTACATTATATAAGCGCTACCTATT
44093 ACATCATATTTTTACC
845 ACATCATATTTTTACC
* * *
44109 TATTATATTGAAAGTGTCGATACTTTTTATAAAAAGGATCGATACTTATTTTAAAATTATGTAAT
1 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
44174 TTATGTTTCAA-TTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
66 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
44238 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
131 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
44303 ATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATATC
196 ATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATATC
*
44368 TTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTTCACAGTGAAAAAAGTATGGACACTT
261 TTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTT
* *
44433 TTATAAAAAGGATAGACACTTTACAATATAACCACTACTTATTACATTATATAAACGATGCCTAT
326 TTATAAAAAGGATAGACACTTTACAATATAACCACTACATATTACATTATATAAACGATACCTAT
*
44498 TACATTATATAAGCGCTACCTATTACATCATATTTTTACCTATTATATTGAAAGTGTTCATACTT
391 TACATTATATAAGCGCTACCTATTACATCATATTTTTACCTATTATATTGAAAGTGTCCATACTT
* *
44563 TTTATAAAAATGATCGATACTTCTTTTAAAGTTATGTAATTTACGTTTCAATTTTTTTTAATAGT
456 TTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAATTTATGTTTCAATTTTTTTTAATAGT
44628 GTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTGCACAAAAAATTATTTGATTT
521 GTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTGCACAAAAAATTATTTGATTT
44693 TTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTAATAATAATATATATCGTAACGTAAA
586 TTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTAATAATAATATATATCGTAACGTAAA
44758 AAATAAATCATTAGACGCCTATAATTACTAAATTAATATCTTAAAACTCACTCAAAAGATAACCT
651 AAATAAATCATTAGACGCCTATAATTACTAAATTAATATCTTAAAACTCACTCAAAAGATAACCT
44823 TAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTTTTATAAAAAGGATAGACACTTTACA
716 TAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTTTTATAAAAAGGATAGACACTTTACA
44888 ATATAACCACTACCTATTACATTATAT-AACGATACCTATTACATTATATAAGCGCTACCTATTA
781 ATATAACCACTACCTATTACATTATATAAACGATACCTATTACATTATATAAGCGCTACCTATTA
44952 CATCATA-TTTTACC
846 CATCATATTTTTACC
*
44966 TATTATATTGAAAGTGTCCAAACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
1 TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
45031 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
66 TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
*
45096 ATTTGCACAAAAAATTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTTTTAATTT
131 ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAA-TTTTTAATTT
45161 AATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATAT
195 AATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATAT
* *
45226 CTTAAAACTCACTCAAAGGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTACGGACACT
260 CTTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACT
*
45291 TTTATAAAAAGGATAGACACTTTACAATATAACCACTACCTATTACATTATATAAACGATACCTA
325 TTTATAAAAAGGATAGACACTTTACAATATAACCACTACATATTACATTATATAAACGATACCTA
*
45356 TTACATTATATAAGCGCTACCTATTACATCATATTTTTACCTATTATATTGAAAGTGTCCAAACT
390 TTACATTATATAAGCGCTACCTATTACATCATATTTTTACCTATTATATTGAAAGTGTCCATACT
45421 TTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAATTTATGTTTCAATTTTTTTTAATAG
455 TTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAATTTATGTTTCAATTTTTTTTAATAG
45486 TGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTGCACAAAAAATTATTTGATT
520 TGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTGCACAAAAAATTATTTGATT
*
45551 ATTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTAA
585 TTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTAA
45593 CAACATTAAC
Statistics
Matches: 1448, Mismatches: 33, Indels: 7
0.97 0.02 0.00
Matches are distributed among these distances:
857 79 0.05
858 489 0.34
859 807 0.56
860 73 0.05
ACGTcount: A:0.39, C:0.12, G:0.08, T:0.41
Consensus pattern (860 bp):
TATTATATTGAAAGTGTCCATACTTTTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAAT
TTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTC
ATTTGCACAAAAAATTATTTGATTTTTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTA
ATAATAATATATATCGTAACGTAAAAAATAAATCATTAGACGCCTATAATTACTAAATTAATATC
TTAAAACTCACTCAAAAGATAACCTTAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTT
TTATAAAAAGGATAGACACTTTACAATATAACCACTACATATTACATTATATAAACGATACCTAT
TACATTATATAAGCGCTACCTATTACATCATATTTTTACCTATTATATTGAAAGTGTCCATACTT
TTTATAAAAAGGATCGATACTTCTTTTAAAGTTATGTAATTTATGTTTCAATTTTTTTTAATAGT
GTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTGCACAAAAAATTATTTGATTT
TTTGATATTTTATAAAATATTATTTAGAATTTTTAATTTAATAATAATATATATCGTAACGTAAA
AAATAAATCATTAGACGCCTATAATTACTAAATTAATATCTTAAAACTCACTCAAAAGATAACCT
TAAATTAATGTTTTCCACAGTGAAAAAAGTATGGACACTTTTATAAAAAGGATAGACACTTTACA
ATATAACCACTACCTATTACATTATATAAACGATACCTATTACATTATATAAGCGCTACCTATTA
CATCATATTTTTACC
Found at i:45353 original size:23 final size:23
Alignment explanation
Indices: 45327--45389 Score: 99
Period size: 23 Copynumber: 2.7 Consensus size: 23
45317 ATATAACCAC
45327 TACCTATTACATTATATAAACGA
1 TACCTATTACATTATATAAACGA
* *
45350 TACCTATTACATTATATAAGCGC
1 TACCTATTACATTATATAAACGA
*
45373 TACCTATTACATCATAT
1 TACCTATTACATTATAT
45390 TTTTACCTAT
Statistics
Matches: 37, Mismatches: 3, Indels: 0
0.93 0.08 0.00
Matches are distributed among these distances:
23 37 1.00
ACGTcount: A:0.38, C:0.21, G:0.05, T:0.37
Consensus pattern (23 bp):
TACCTATTACATTATATAAACGA
Found at i:45865 original size:39 final size:39
Alignment explanation
Indices: 45811--45897 Score: 156
Period size: 39 Copynumber: 2.2 Consensus size: 39
45801 TCAAGTTGTA
*
45811 GATTTTGATTTCCTTTTGCTTGGCATCATATGAGATTTG
1 GATTTTGATTTCCTTTTGCTTGGCACCATATGAGATTTG
*
45850 GATTTTGATTTCCTTTTGCTTGGCACCATATGAGCTTTG
1 GATTTTGATTTCCTTTTGCTTGGCACCATATGAGATTTG
45889 GATTTTGAT
1 GATTTTGAT
45898 GAGCATCGGA
Statistics
Matches: 46, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
39 46 1.00
ACGTcount: A:0.17, C:0.14, G:0.21, T:0.48
Consensus pattern (39 bp):
GATTTTGATTTCCTTTTGCTTGGCACCATATGAGATTTG
Found at i:46179 original size:18 final size:18
Alignment explanation
Indices: 46156--46192 Score: 56
Period size: 18 Copynumber: 2.1 Consensus size: 18
46146 CGAAATATAT
46156 ATTGAAATTCAAACTCAA
1 ATTGAAATTCAAACTCAA
* *
46174 ATTGAAATTGAAATTCAA
1 ATTGAAATTCAAACTCAA
46192 A
1 A
46193 CTCCAATTAC
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
18 17 1.00
ACGTcount: A:0.51, C:0.11, G:0.08, T:0.30
Consensus pattern (18 bp):
ATTGAAATTCAAACTCAA
Found at i:46656 original size:23 final size:23
Alignment explanation
Indices: 46630--46692 Score: 99
Period size: 23 Copynumber: 2.7 Consensus size: 23
46620 ATATAACCAC
46630 TACCTATTACATTATATAAACGA
1 TACCTATTACATTATATAAACGA
* *
46653 TACCTATTACATTATATAAGCGC
1 TACCTATTACATTATATAAACGA
*
46676 TACCTATTACATCATAT
1 TACCTATTACATTATAT
46693 GTTTACCTAT
Statistics
Matches: 37, Mismatches: 3, Indels: 0
0.93 0.08 0.00
Matches are distributed among these distances:
23 37 1.00
ACGTcount: A:0.38, C:0.21, G:0.05, T:0.37
Consensus pattern (23 bp):
TACCTATTACATTATATAAACGA
Found at i:47095 original size:25 final size:25
Alignment explanation
Indices: 47038--47103 Score: 87
Period size: 25 Copynumber: 2.6 Consensus size: 25
47028 CACTCAAAAG
*
47038 ATGTATATACCTAAATATGTAGTTA
1 ATGTACATACCTAAATATGTAGTTA
***
47063 ACAAACATACCTAAATATGTAGTTA
1 ATGTACATACCTAAATATGTAGTTA
*
47088 TTGTACATACCTAAAT
1 ATGTACATACCTAAAT
47104 TTAATGATAA
Statistics
Matches: 33, Mismatches: 8, Indels: 0
0.80 0.20 0.00
Matches are distributed among these distances:
25 33 1.00
ACGTcount: A:0.42, C:0.14, G:0.09, T:0.35
Consensus pattern (25 bp):
ATGTACATACCTAAATATGTAGTTA
Found at i:50094 original size:183 final size:183
Alignment explanation
Indices: 49570--50062 Score: 916
Period size: 183 Copynumber: 2.7 Consensus size: 183
49560 TTAAAATTAC
*
49570 CGACACTTTTTTAAATGGTATCGACACATTTTTCTTCCAATCTGGACATAAAGTACCGACACAAT
1 CGACACTTTTTTAAATCGTATCGACACATTTTTCTTCCAATCTGGACATAAAGTACCGACACAAT
* *
49635 ATTAGAAAGTGTCGATATAGGTTGTAGACCTATTCGCTCATAAAACCGGTATATTTATACCGGTT
66 ATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCATAAAACCGGTATATTTATACCGGTT
*
49700 ATATTACAAAATTATCTATTACATTATAAATCTGGGTTCTGATGTGTAAATGT
131 ATATTACAAAATTATCTATTACATTATAAATCTGGGTTCCGATGTGTAAATGT
49753 CGACACTTTTTTAAATCGTATCGACACATTTTTCTTCCAATCTGGACATAAAGTACCGACACAAT
1 CGACACTTTTTTAAATCGTATCGACACATTTTTCTTCCAATCTGGACATAAAGTACCGACACAAT
49818 ATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCATAAAACCGGTATATTTATACCGGTT
66 ATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCATAAAACCGGTATATTTATACCGGTT
49883 ATATTACAAAATTATCTATTACATTATAAATCTGGGTTCCGATGTGTAAATGT
131 ATATTACAAAATTATCTATTACATTATAAATCTGGGTTCCGATGTGTAAATGT
* *
49936 CGACACTTTTTGACAAT-GTATCGACACATTTTTCTTCCAATCTGGACAAAAAGTACCGACACAA
1 CGACACTTTTTTA-AATCGTATCGACACATTTTTCTTCCAATCTGGACATAAAGTACCGACACAA
50000 TATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCATAAAACCGGTATATTTATACCG
65 TATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCATAAAACCGGTATATTTATACCG
50063 ATAGCATTGC
Statistics
Matches: 303, Mismatches: 6, Indels: 2
0.97 0.02 0.01
Matches are distributed among these distances:
183 300 0.99
184 3 0.01
ACGTcount: A:0.33, C:0.18, G:0.15, T:0.34
Consensus pattern (183 bp):
CGACACTTTTTTAAATCGTATCGACACATTTTTCTTCCAATCTGGACATAAAGTACCGACACAAT
ATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCATAAAACCGGTATATTTATACCGGTT
ATATTACAAAATTATCTATTACATTATAAATCTGGGTTCCGATGTGTAAATGT
Found at i:51578 original size:9 final size:9
Alignment explanation
Indices: 51564--51604 Score: 55
Period size: 9 Copynumber: 4.6 Consensus size: 9
51554 CTTGTTTGGA
51564 TCATCATCT
1 TCATCATCT
*
51573 TCATCATCG
1 TCATCATCT
*
51582 TCATCATCA
1 TCATCATCT
*
51591 TCGTCATCT
1 TCATCATCT
51600 TCATC
1 TCATC
51605 GTCAGCTTCA
Statistics
Matches: 27, Mismatches: 5, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
9 27 1.00
ACGTcount: A:0.22, C:0.34, G:0.05, T:0.39
Consensus pattern (9 bp):
TCATCATCT
Found at i:53538 original size:198 final size:199
Alignment explanation
Indices: 53085--54256 Score: 2089
Period size: 200 Copynumber: 5.9 Consensus size: 199
53075 TTTAAATTAG
* * *
53085 TATCGACACAAACTAAAA-CGTTTCGACACATTATTTAGACATATTCTCTCATAAAACTGGTATA
1 TATCGACACAAACTAAAATAGTGTCGACACATTATTTAGACATATTCTCTCATAAAACCGGTATA
*
53149 CTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTGGGAT
66 CTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTAGGAT
* *
53214 CGACACTTTTTTATATATGGATCGACACTTTATGGGTGCACCCTGTTTTCCATTCATTCTGGACC
131 CGACAC-TTTTTATATATGGATCGACACTTTATGGTTGCACCCTGTTTTCCATTCATTCTGGAAC
*
53279 AAAAC
195 AAAAA
53284 TATCGACACAAACTAAAA-AGTGTCGACACATTATTTAGACATATTCTCTCATAAAACCGGTATA
1 TATCGACACAAACTAAAATAGTGTCGACACATTATTTAGACATATTCTCTCATAAAACCGGTATA
* *
53348 CTTGTATCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTGGGAT
66 CTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTAGGAT
*
53413 CGACACTTTTTATATATGGATCGACACTTTATGGTTGCACCCTGTTTTCCATTCATTCTGGACCA
131 CGACACTTTTTATATATGGATCGACACTTTATGGTTGCACCCTGTTTTCCATTCATTCTGGAACA
53478 AAAA
196 AAAA
* *
53482 TATCGACACAAACTAAAA-CGTGTCGACACATTATTTAGACATATTTTCTCATAAAACCGGTATA
1 TATCGACACAAACTAAAATAGTGTCGACACATTATTTAGACATATTCTCTCATAAAACCGGTATA
* *
53546 TTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTGGGAT
66 CTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTAGGAT
53611 CGACACTTTTTATATATGGATCGACACTTTATGGTTGCACCCTGTTTTCCATTCATTCTGGAACA
131 CGACACTTTTTATATATGGATCGACACTTTATGGTTGCACCCTGTTTTCCATTCATTCTGGAACA
53676 AAAA
196 AAAA
*
53680 TATCGACACAAACTAAAATAGTGTCGACATATTATTTAGACATATTCTCTCATAAAACCGGTATA
1 TATCGACACAAACTAAAATAGTGTCGACACATTATTTAGACATATTCTCTCATAAAACCGGTATA
*
53745 TTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTAGGAT
66 CTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTAGGAT
53810 CGACACTTTTTATATATGGATCGACACTTTTATGGTTGCACCCTGTTTTCCATTCATTCTGGAAC
131 CGACACTTTTTATATATGGATCGACAC-TTTATGGTTGCACCCTGTTTTCCATTCATTCTGGAAC
53875 AAAAA
195 AAAAA
*
53880 TATCGACACAAACTAAAATAGTGTCGACATATTATTTAGACATATTCTCTCATAAAACCGGTATA
1 TATCGACACAAACTAAAATAGTGTCGACACATTATTTAGACATATTCTCTCATAAAACCGGTATA
* *
53945 TTTGTACCAGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTAGGAT
66 CTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTAGGAT
*
54010 CGACACTTTTTATATATGGATCGACACTTTTATGGTTGCACCCTGTTTTTCATTCATTCTGGAAC
131 CGACACTTTTTATATATGGATCGACAC-TTTATGGTTGCACCCTGTTTTCCATTCATTCTGGAAC
54075 AAAAA
195 AAAAA
54080 TATCGACACAAACTAAAATAGTGTCGACACATTATTTAGACATATTCTCTCATAAAACCGGTATA
1 TATCGACACAAACTAAAATAGTGTCGACACATTATTTAGACATATTCTCTCATAAAACCGGTATA
*
54145 CTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGTTTTCGATGTTTTTAGGA
66 CTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGG-GTTCGATGTTTTTAGGA
*
54210 TCGACACGTTTTATATATGGATCGACACTTTATGGTTGCACCCTGTT
130 TCGACACTTTTTATATATGGATCGACACTTTATGGTTGCACCCTGTT
54257 GGCCATTTTG
Statistics
Matches: 948, Mismatches: 22, Indels: 5
0.97 0.02 0.01
Matches are distributed among these distances:
198 272 0.29
199 265 0.28
200 368 0.39
201 43 0.05
ACGTcount: A:0.31, C:0.17, G:0.15, T:0.37
Consensus pattern (199 bp):
TATCGACACAAACTAAAATAGTGTCGACACATTATTTAGACATATTCTCTCATAAAACCGGTATA
CTTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGTTTTTAGGAT
CGACACTTTTTATATATGGATCGACACTTTATGGTTGCACCCTGTTTTCCATTCATTCTGGAACA
AAAA
Found at i:54421 original size:19 final size:19
Alignment explanation
Indices: 54375--54423 Score: 80
Period size: 19 Copynumber: 2.6 Consensus size: 19
54365 TTATATTCAC
*
54375 ATACAAAAATATAAATCGT
1 ATACAAAATTATAAATCGT
*
54394 ATACAAAATTATAAATCTT
1 ATACAAAATTATAAATCGT
54413 ATACAAAATTA
1 ATACAAAATTA
54424 ACCCTACATT
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
19 28 1.00
ACGTcount: A:0.57, C:0.10, G:0.02, T:0.31
Consensus pattern (19 bp):
ATACAAAATTATAAATCGT
Found at i:56251 original size:33 final size:33
Alignment explanation
Indices: 56214--56279 Score: 96
Period size: 33 Copynumber: 2.0 Consensus size: 33
56204 CATCTTAATA
* *
56214 TCACCCCTTAACACCCCAATTTCTTTCACCACT
1 TCACCCCTCAACACCCCAACTTCTTTCACCACT
* *
56247 TCACCCCTCAACACCTCTACTTCTTTCACCACT
1 TCACCCCTCAACACCCCAACTTCTTTCACCACT
56280 CCATCTATTT
Statistics
Matches: 29, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
33 29 1.00
ACGTcount: A:0.23, C:0.47, G:0.00, T:0.30
Consensus pattern (33 bp):
TCACCCCTCAACACCCCAACTTCTTTCACCACT
Found at i:56338 original size:21 final size:21
Alignment explanation
Indices: 56313--56356 Score: 70
Period size: 21 Copynumber: 2.1 Consensus size: 21
56303 CCCCTTATGC
56313 CTCTCAAGTGTATCTTCGACT
1 CTCTCAAGTGTATCTTCGACT
* *
56334 CTCTCAAGTTTCTCTTCGACT
1 CTCTCAAGTGTATCTTCGACT
56355 CT
1 CT
56357 TGATTGTCTT
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
21 21 1.00
ACGTcount: A:0.16, C:0.32, G:0.11, T:0.41
Consensus pattern (21 bp):
CTCTCAAGTGTATCTTCGACT
Found at i:58587 original size:17 final size:18
Alignment explanation
Indices: 58565--58607 Score: 61
Period size: 20 Copynumber: 2.3 Consensus size: 18
58555 ATATATCCGG
58565 TATCATTT-TACCGGTTT
1 TATCATTTATACCGGTTT
58582 TATCATTTTAATACCGGTTT
1 TATCA-TTT-ATACCGGTTT
58602 TATCAT
1 TATCAT
58608 ATTTTTACCT
Statistics
Matches: 23, Mismatches: 0, Indels: 4
0.85 0.00 0.15
Matches are distributed among these distances:
17 5 0.22
18 3 0.13
19 1 0.04
20 14 0.61
ACGTcount: A:0.23, C:0.16, G:0.09, T:0.51
Consensus pattern (18 bp):
TATCATTTATACCGGTTT
Found at i:58625 original size:20 final size:19
Alignment explanation
Indices: 58570--58616 Score: 67
Period size: 20 Copynumber: 2.4 Consensus size: 19
58560 TCCGGTATCA
58570 TTTTACCGGTTTTATCATT
1 TTTTACCGGTTTTATCATT
*
58589 TTAATACCGGTTTTATCATAT
1 TT-TTACCGGTTTTATCAT-T
58610 TTTTACC
1 TTTTACC
58617 TGTTATATCG
Statistics
Matches: 24, Mismatches: 2, Indels: 3
0.83 0.07 0.10
Matches are distributed among these distances:
19 2 0.08
20 19 0.79
21 3 0.12
ACGTcount: A:0.21, C:0.17, G:0.09, T:0.53
Consensus pattern (19 bp):
TTTTACCGGTTTTATCATT
Found at i:58795 original size:20 final size:19
Alignment explanation
Indices: 58751--58796 Score: 65
Period size: 20 Copynumber: 2.3 Consensus size: 19
58741 TCGGTAACGT
*
58751 TTTACCGGTTTTATCATTT
1 TTTACCGGTTTTATCATTA
58770 TGTTACCGGTTTTATCATATA
1 T-TTACCGGTTTTATCAT-TA
58791 TTTACC
1 TTTACC
58797 TGGTATATCG
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
19 1 0.04
20 21 0.88
21 2 0.08
ACGTcount: A:0.20, C:0.17, G:0.11, T:0.52
Consensus pattern (19 bp):
TTTACCGGTTTTATCATTA
Found at i:59536 original size:229 final size:229
Alignment explanation
Indices: 58845--60019 Score: 2132
Period size: 228 Copynumber: 5.1 Consensus size: 229
58835 ACTTTTATAC
*
58845 GTATGGACACTTTTATACAAATGATATATAC-TTTTTTAAAGTTATGTAATTTATGTTTCAATTT
1 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAA-TT
58909 TTTTTTAATAGTGTTTCATG-TTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAA
65 TTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAA
58973 ATTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAA
130 ATTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAA
59038 AGATAATAATAAATATGTTTTCCACAGTGAAATAA
195 AGATAATAATAAATATGTTTTCCACAGTGAAATAA
59073 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAA-TT
1 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAATTT
59137 TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAAA
66 TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAAA
59202 TTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAAA
131 TTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAAA
* *
59267 GATAATAATAAATATGTTTTCCACAGTTAAATAG
196 GATAATAATAAATATGTTTTCCACAGTGAAATAA
59301 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAATTT
1 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAATTT
59366 TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAAA
66 TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAAA
59431 TTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAAA
131 TTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAAA
* *
59496 TATAATAATAAATATGTTTTCCAGAGTGAAATAA
196 GATAATAATAAATATGTTTTCCACAGTGAAATAA
59530 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTTAAAGTTATGTAATTTATGTTTCAATT
1 GTATGGACACTTTTATAAAAATGATATATAC-TTTTTTTAAAGTTATGTAATTTATGTTTCAATT
* *
59595 TTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTTATTTACACACAAA
65 TTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAA
*
59660 ATTATTTGATTGTTTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCA
130 ATTATTTGATT-ATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCA
59725 AAGATAATAATAAATA--TTTT-CACAGTGAAATAA
194 AAGATAATAATAAATATGTTTTCCACAGTGAAATAA
*
59758 GTATGGACACTTTTATAAAAAGGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAA-TT
1 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAATTT
*
59822 TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACACAAAA
66 TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAAA
*
59887 TTATTTGATTGTTTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAA
131 TTATTTGATT-ATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAA
*
59952 AGATAATAATAAATATATTTT-CACAGTGAAATAA
195 AGATAATAATAAATATGTTTTCCACAGTGAAATAA
* *
59986 GTATGGACACTTTTATAAAAAGGATAGATACTTT
1 GTATGGACACTTTTATAAAAATGATATATACTTT
60020 ACAATATAAC
Statistics
Matches: 925, Mismatches: 15, Indels: 14
0.97 0.02 0.01
Matches are distributed among these distances:
226 146 0.16
227 52 0.06
228 326 0.35
229 227 0.25
230 107 0.12
231 67 0.07
ACGTcount: A:0.39, C:0.08, G:0.08, T:0.45
Consensus pattern (229 bp):
GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAATTT
TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAAA
TTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAAA
GATAATAATAAATATGTTTTCCACAGTGAAATAA
Found at i:59734 original size:457 final size:456
Alignment explanation
Indices: 58845--60019 Score: 2112
Period size: 457 Copynumber: 2.6 Consensus size: 456
58835 ACTTTTATAC
*
58845 GTATGGACACTTTTATACAAATGATATATAC-TTTTTTAAAGTTATGTAATTTATGTTTCAATTT
1 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAA-TT
58909 TTTTTTAATAGTGTTTCATG-TTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAA
65 TTTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAA
58973 ATTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAA
130 ATTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAA
59038 AGATAATAATAAATATGTTTTCCACAGTGAAATAAGTATGGACACTTTTATAAAAATGATATATA
195 AGATAATAATAAATATGTTTTCCACAGTGAAATAAGTATGGACACTTTTATAAAAATGATATATA
59103 C-TTTTTTTAAAGTTATGTAATTTATGTTTCAATTTTTTTAATAGTGTTTCATGTTTTCCACCTA
260 CTTTTTTTTAAAGTTATGTAATTTATGTTTCAATTTTTTTAATAGTGTTTCATGTTTTCCACCTA
59167 CAATATTAATTTAATAATTTCATTTACACAAAAAATTATTTGATTATTTGATATTTTATAAAATA
325 CAATATTAATTTAATAATTTCATTTACACAAAAAATTATTTGATTATTTGATATTTTATAAAATA
*
59232 TTATTTAGAATTTAAATTTAACAATATTAACCAAAG-ATAATAATAAATATGTTTTCCACAGTTA
390 TTATTTAGAATTTAAATTTAACAATATTAACCAAAGAATAATAATAAATA--TTTT-CACAGTGA
*
59296 AATAG
452 AATAA
59301 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAATTT
1 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAATTT
59366 TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAAA
66 TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAAA
59431 TTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAAA
131 TTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAAA
* *
59496 TATAATAATAAATATGTTTTCCAGAGTGAAATAAGTATGGACACTTTTATAAAAATGATATATAC
196 GATAATAATAAATATGTTTTCCACAGTGAAATAAGTATGGACACTTTTATAAAAATGATATATAC
59561 TTTTTTTTAAAGTTATGTAATTTATGTTTCAATTTTTTTTAATAGTGTTTCATGTTTTCCACCTA
261 TTTTTTTTAAAGTTATGTAATTTATGTTTCAA-TTTTTTTAATAGTGTTTCATGTTTTCCACCTA
* * *
59626 CAATATTAATTTAATAATTTTATTTACACACAAAATTATTTGATTGTTTTGATATTTTATAAAAT
325 CAATATTAATTTAATAATTTCATTTACACAAAAAATTATTTGATT-ATTTGATATTTTATAAAAT
59691 ATTATTTAGAATTTAAATTTAACAATATTAACCAAAG-ATAATAATAAATATTTTCACAGTGAAA
389 ATTATTTAGAATTTAAATTTAACAATATTAACCAAAGAATAATAATAAATATTTTCACAGTGAAA
59755 TAA
454 TAA
*
59758 GTATGGACACTTTTATAAAAAGGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAA-TT
1 GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAATTT
*
59822 TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACACAAAA
66 TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAAA
*
59887 TTATTTGATTGTTTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAA
131 TTATTTGATT-ATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAA
* * *
59952 AGATAATAATAAATATATTTT-CACAGTGAAATAAGTATGGACACTTTTATAAAAAGGATAGATA
195 AGATAATAATAAATATGTTTTCCACAGTGAAATAAGTATGGACACTTTTATAAAAATGATATATA
60016 CTTT
260 CTTT
60020 ACAATATAAC
Statistics
Matches: 697, Mismatches: 16, Indels: 12
0.96 0.02 0.02
Matches are distributed among these distances:
456 172 0.25
457 347 0.50
458 35 0.05
459 75 0.11
460 68 0.10
ACGTcount: A:0.39, C:0.08, G:0.08, T:0.45
Consensus pattern (456 bp):
GTATGGACACTTTTATAAAAATGATATATACTTTTTTTAAAGTTATGTAATTTATGTTTCAATTT
TTTTTAATAGTGTTTCATGTTTTCCACCTACAATATTAATTTAATAATTTCATTTACACAAAAAA
TTATTTGATTATTTGATATTTTATAAAATATTATTTAGAATTTAAATTTAACAATATTAACCAAA
GATAATAATAAATATGTTTTCCACAGTGAAATAAGTATGGACACTTTTATAAAAATGATATATAC
TTTTTTTTAAAGTTATGTAATTTATGTTTCAATTTTTTTAATAGTGTTTCATGTTTTCCACCTAC
AATATTAATTTAATAATTTCATTTACACAAAAAATTATTTGATTATTTGATATTTTATAAAATAT
TATTTAGAATTTAAATTTAACAATATTAACCAAAGAATAATAATAAATATTTTCACAGTGAAATA
A
Found at i:65060 original size:8 final size:8
Alignment explanation
Indices: 65047--65087 Score: 57
Period size: 8 Copynumber: 5.2 Consensus size: 8
65037 CTCATTTTCA
65047 GAGAATTT
1 GAGAATTT
65055 GAGAATTT
1 GAGAATTT
*
65063 -AGAGTTT
1 GAGAATTT
*
65070 GGGAATTT
1 GAGAATTT
65078 GAGAATTT
1 GAGAATTT
65086 GA
1 GA
65088 AAGATTGTGA
Statistics
Matches: 28, Mismatches: 4, Indels: 2
0.82 0.12 0.06
Matches are distributed among these distances:
7 6 0.21
8 22 0.79
ACGTcount: A:0.34, C:0.00, G:0.29, T:0.37
Consensus pattern (8 bp):
GAGAATTT
Found at i:65388 original size:128 final size:128
Alignment explanation
Indices: 65160--66426 Score: 2241
Period size: 128 Copynumber: 9.9 Consensus size: 128
65150 ATCGGAGTAT
*
65160 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCGTCAGAGAATATGTTATCA
1 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
*
65225 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATAATTTCAC
66 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
65288 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
1 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
65353 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
66 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
*
65416 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATATTATCA
1 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
* *
65481 TTGCCCTATTATGTCACTCATGTCCCTCGGGGATACTAGATATATCAGTACCTATTATTTCTC
66 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
*** * * *
65544 -AGGGGACATGAAGGCACGTTCTCGGGGGCGCGCCTTCCATTATTTCGTCAGAGAATATGTTATC
1 TA-TTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATC
*
65608 ATTGCCCTATTATGTCACTCATGTCCCTTGGGGACACTAGATATATCAGTACCTATTATTTCAC
65 ATTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
* * * *
65672 TATTCACATAAAGGCGCGTTCTCGGGGGCGCGCCTTCCATTATTTCATCAGATAACATGTTATCA
1 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
65737 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
66 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
* *
65800 TATTCACATGAAGGCTCGTTCCCGAGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
1 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
* *
65865 TTGCCCTATTATGTCATTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCTC
66 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
*** *
65928 -AGGGGACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCGTCAGAGAATATGTTATC
1 TA-TTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATC
65992 ATTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
65 ATTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
* * *
66056 TATTCACATGAAGGCGCGTTCTCGGGGGCGCGCCTTCCATTATTTCATCAGATAACATGTTATCA
1 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
66121 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
66 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
*
66184 TATTCACATGAAGGCGCGTTCCCGAGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
1 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
66249 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
66 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
*
66312 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGTCTTCCATTATTTCATCAGAGAATATGTTATCA
1 TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
66377 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTA
66 TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTA
66427 AATCAGGTAA
Statistics
Matches: 1082, Mismatches: 53, Indels: 8
0.95 0.05 0.01
Matches are distributed among these distances:
127 2 0.00
128 1078 1.00
129 2 0.00
ACGTcount: A:0.24, C:0.25, G:0.19, T:0.32
Consensus pattern (128 bp):
TATTCACATGAAGGCGCGTTCCCGGGGGCGCGCCTTCCATTATTTCATCAGAGAATATGTTATCA
TTGCCCTATTATGTCACTCATGTCCCTCGGGGACACTAGATATATCAGTACCTATTATTTCAC
Found at i:66865 original size:34 final size:34
Alignment explanation
Indices: 66827--66926 Score: 130
Period size: 33 Copynumber: 3.0 Consensus size: 34
66817 AAATTTAATG
*
66827 TTAAATTTTGAATACTATAATTTATATTTTAAAT
1 TTAAATTTTGAATAATATAATTTATATTTTAAAT
* * * *
66861 TTAAA-TTTGAATAATATTATTTTTATTTTTATT
1 TTAAATTTTGAATAATATAATTTATATTTTAAAT
* *
66894 TTAAATTTCGAATAATATAATTTGTATTTTAAA
1 TTAAATTTTGAATAATATAATTTATATTTTAAA
66927 AACATTTATC
Statistics
Matches: 55, Mismatches: 10, Indels: 2
0.82 0.15 0.03
Matches are distributed among these distances:
33 28 0.51
34 27 0.49
ACGTcount: A:0.39, C:0.02, G:0.04, T:0.55
Consensus pattern (34 bp):
TTAAATTTTGAATAATATAATTTATATTTTAAAT
Found at i:67475 original size:21 final size:21
Alignment explanation
Indices: 67445--67580 Score: 204
Period size: 21 Copynumber: 6.5 Consensus size: 21
67435 TATGGTATAA
*
67445 AACCCTGCGGGCTAGGCATGT
1 AACCCTGCGGGCTAGGAATGT
*
67466 AA-CCTGGCGGGCTAGGCATGT
1 AACCCT-GCGGGCTAGGAATGT
67487 AA-CCTGGCGGGCTAGGAATGT
1 AACCCT-GCGGGCTAGGAATGT
67508 AACCCTGCGGGCTAGGAATGT
1 AACCCTGCGGGCTAGGAATGT
*
67529 AACCCTGCGGGCTCGGAATGT
1 AACCCTGCGGGCTAGGAATGT
*
67550 AACCCTGCGGGCTCGGAATGT
1 AACCCTGCGGGCTAGGAATGT
67571 AACCCTGCGG
1 AACCCTGCGG
67581 AGATGGCATA
Statistics
Matches: 111, Mismatches: 2, Indels: 4
0.95 0.02 0.03
Matches are distributed among these distances:
20 3 0.03
21 105 0.95
22 3 0.03
ACGTcount: A:0.21, C:0.26, G:0.35, T:0.18
Consensus pattern (21 bp):
AACCCTGCGGGCTAGGAATGT
Found at i:67610 original size:21 final size:21
Alignment explanation
Indices: 67584--67631 Score: 60
Period size: 21 Copynumber: 2.3 Consensus size: 21
67574 CCTGCGGAGA
*
67584 TGGCATATAAACTGGTGGGCT
1 TGGCATATAAACTGGAGGGCT
* *
67605 TGGCATATGAAGTGGAGGGCT
1 TGGCATATAAACTGGAGGGCT
*
67626 GGGCAT
1 TGGCAT
67632 GTACCCCTGC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
21 23 1.00
ACGTcount: A:0.23, C:0.12, G:0.40, T:0.25
Consensus pattern (21 bp):
TGGCATATAAACTGGAGGGCT
Found at i:69392 original size:17 final size:19
Alignment explanation
Indices: 69370--69413 Score: 56
Period size: 19 Copynumber: 2.4 Consensus size: 19
69360 ATAATTATAT
69370 AAATATTAT-TTTA-ATAA
1 AAATATTATATTTACATAA
*
69387 AAATATAATATTTACATAA
1 AAATATTATATTTACATAA
*
69406 ATATATTA
1 AAATATTA
69414 ATATAAAAAA
Statistics
Matches: 22, Mismatches: 3, Indels: 2
0.81 0.11 0.07
Matches are distributed among these distances:
17 8 0.36
18 4 0.18
19 10 0.45
ACGTcount: A:0.55, C:0.02, G:0.00, T:0.43
Consensus pattern (19 bp):
AAATATTATATTTACATAA
Found at i:69405 original size:19 final size:18
Alignment explanation
Indices: 69357--69444 Score: 55
Period size: 17 Copynumber: 5.1 Consensus size: 18
69347 TTCTAAATAA
* *
69357 ATAATAATT-ATATAAAT
1 ATAATATTTAATAAAAAT
*
69374 ATTAT-TTTAATAAAAAT
1 ATAATATTTAATAAAAAT
*
69391 ATAATATTTACATAAATAT
1 ATAATATTTA-ATAAAAAT
69410 ATTAATA--T-A-AAAAAT
1 A-TAATATTTAATAAAAAT
69425 AATAACTATTTAA-AAAAAT
1 -ATAA-TATTTAATAAAAAT
69444 A
1 A
69445 CTAACATAAA
Statistics
Matches: 56, Mismatches: 6, Indels: 17
0.71 0.08 0.22
Matches are distributed among these distances:
15 8 0.14
16 6 0.11
17 15 0.27
18 7 0.12
19 15 0.27
20 5 0.09
ACGTcount: A:0.59, C:0.02, G:0.00, T:0.39
Consensus pattern (18 bp):
ATAATATTTAATAAAAAT
Found at i:69454 original size:34 final size:34
Alignment explanation
Indices: 69385--69456 Score: 85
Period size: 34 Copynumber: 2.1 Consensus size: 34
69375 TTATTTTAAT
* * *
69385 AAAAATATAATATTTACATAAATATATTAATATA
1 AAAAATATAATATTTACATAAAAATACTAACATA
69419 AAAAATAATAACTATTTA-A-AAAAATACTAACATA
1 AAAAAT-ATAA-TATTTACATAAAAATACTAACATA
69453 AAAA
1 AAAA
69457 TAAATTTCTT
Statistics
Matches: 33, Mismatches: 3, Indels: 4
0.82 0.08 0.10
Matches are distributed among these distances:
34 22 0.67
35 5 0.15
36 6 0.18
ACGTcount: A:0.64, C:0.06, G:0.00, T:0.31
Consensus pattern (34 bp):
AAAAATATAATATTTACATAAAAATACTAACATA
Found at i:78723 original size:45 final size:45
Alignment explanation
Indices: 78673--78769 Score: 124
Period size: 45 Copynumber: 2.2 Consensus size: 45
78663 CTTATACGTT
* *
78673 CTACCATCCCTCAGACTTCGT-TGTTTCTCCAGTTCAACCTGCTGC
1 CTACCATCCCTCAGACTTC-TCGGATTCTCCAGTTCAACCTGCTGC
* * *
78718 CTACCATCCTTCAGGCTTCTCGGATTCTCCAGTTCAACCTGTTGC
1 CTACCATCCCTCAGACTTCTCGGATTCTCCAGTTCAACCTGCTGC
*
78763 CTCCCAT
1 CTACCAT
78770 TGTCCCCTCT
Statistics
Matches: 45, Mismatches: 6, Indels: 2
0.85 0.11 0.04
Matches are distributed among these distances:
44 1 0.02
45 44 0.98
ACGTcount: A:0.15, C:0.38, G:0.13, T:0.33
Consensus pattern (45 bp):
CTACCATCCCTCAGACTTCTCGGATTCTCCAGTTCAACCTGCTGC
Found at i:85677 original size:19 final size:18
Alignment explanation
Indices: 85655--85710 Score: 60
Period size: 18 Copynumber: 3.1 Consensus size: 18
85645 GTTTGTTTCC
85655 TACAGTATGTTTTCTACAA
1 TACAGTATGTTTTCTAC-A
* * *
85674 TACAATTTGTTTTCTTTC-
1 TACAGTATGTTTTC-TACA
85692 TACAGTATGTTTTCTACA
1 TACAGTATGTTTTCTACA
85710 T
1 T
85711 GGTATCAGGT
Statistics
Matches: 29, Mismatches: 6, Indels: 5
0.73 0.15 0.12
Matches are distributed among these distances:
17 2 0.07
18 13 0.45
19 12 0.41
20 2 0.07
ACGTcount: A:0.25, C:0.16, G:0.09, T:0.50
Consensus pattern (18 bp):
TACAGTATGTTTTCTACA
Found at i:87822 original size:36 final size:36
Alignment explanation
Indices: 87775--87846 Score: 108
Period size: 36 Copynumber: 2.0 Consensus size: 36
87765 CCTAGCATTC
* * * *
87775 GCCAAGAACCAGATTCGGATCTTGTTGCCTCTGAAA
1 GCCAAGAACCAGATTCAGATCCTATTGCATCTGAAA
87811 GCCAAGAACCAGATTCAGATCCTATTGCATCTGAAA
1 GCCAAGAACCAGATTCAGATCCTATTGCATCTGAAA
87847 CAGAAGGTAA
Statistics
Matches: 32, Mismatches: 4, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
36 32 1.00
ACGTcount: A:0.32, C:0.25, G:0.19, T:0.24
Consensus pattern (36 bp):
GCCAAGAACCAGATTCAGATCCTATTGCATCTGAAA
Found at i:89794 original size:19 final size:19
Alignment explanation
Indices: 89772--89827 Score: 80
Period size: 18 Copynumber: 3.0 Consensus size: 19
89762 TCTGTTTCCC
89772 ACAGTCTGTTTTCTACAAT
1 ACAGTCTGTTTTCTACAAT
*
89791 ACAGTCTGTTTTCTTTC--T
1 ACAGTCTGTTTTC-TACAAT
89809 ACAGTCTGTTTTCTACAAT
1 ACAGTCTGTTTTCTACAAT
89828 GTGACATGAT
Statistics
Matches: 32, Mismatches: 2, Indels: 6
0.80 0.05 0.15
Matches are distributed among these distances:
17 2 0.06
18 14 0.44
19 14 0.44
20 2 0.06
ACGTcount: A:0.21, C:0.21, G:0.11, T:0.46
Consensus pattern (19 bp):
ACAGTCTGTTTTCTACAAT
Found at i:94579 original size:42 final size:41
Alignment explanation
Indices: 94492--94594 Score: 136
Period size: 42 Copynumber: 2.5 Consensus size: 41
94482 AAATAACCAA
*
94492 CAAATTCGCAACGCGAA-CTCCAATTTCGCAACACAGTTTT
1 CAAATTCGCAACGCGAATTTCCAATTTCGCAACACAGTTTT
* * *
94532 CAAATTCACAACGCGAATTTCCCATATTCGCAACTCAGTTTT
1 CAAATTCGCAACGCGAATTTCCAAT-TTCGCAACACAGTTTT
* *
94574 GAAATTCGCAACTCGAATTTC
1 CAAATTCGCAACGCGAATTTC
94595 TTTTCCGCAA
Statistics
Matches: 54, Mismatches: 7, Indels: 2
0.86 0.11 0.03
Matches are distributed among these distances:
40 16 0.30
41 5 0.09
42 33 0.61
ACGTcount: A:0.32, C:0.28, G:0.12, T:0.28
Consensus pattern (41 bp):
CAAATTCGCAACGCGAATTTCCAATTTCGCAACACAGTTTT
Found at i:94714 original size:26 final size:26
Alignment explanation
Indices: 94678--94727 Score: 73
Period size: 26 Copynumber: 1.9 Consensus size: 26
94668 CGCGTTTATT
* * *
94678 TTCGCAACACGAATTTTATTTTTGAA
1 TTCGAAACACGAATATTAATTTTGAA
94704 TTCGAAACACGAATATTAATTTTG
1 TTCGAAACACGAATATTAATTTTG
94728 CAACACAAAT
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.34, C:0.14, G:0.12, T:0.40
Consensus pattern (26 bp):
TTCGAAACACGAATATTAATTTTGAA
Found at i:104788 original size:32 final size:32
Alignment explanation
Indices: 104752--104824 Score: 137
Period size: 32 Copynumber: 2.3 Consensus size: 32
104742 TAATTAACTA
104752 AACTGTTAAGGTTTAATAGTTTCGATTAATCG
1 AACTGTTAAGGTTTAATAGTTTCGATTAATCG
*
104784 AACTGTTAAGGTTTAATAGTTTTGATTAATCG
1 AACTGTTAAGGTTTAATAGTTTCGATTAATCG
104816 AACTGTTAA
1 AACTGTTAA
104825 AAATACTGGT
Statistics
Matches: 40, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
32 40 1.00
ACGTcount: A:0.33, C:0.08, G:0.18, T:0.41
Consensus pattern (32 bp):
AACTGTTAAGGTTTAATAGTTTCGATTAATCG
Found at i:107739 original size:29 final size:31
Alignment explanation
Indices: 107696--107757 Score: 92
Period size: 29 Copynumber: 2.1 Consensus size: 31
107686 CCTTTACCTT
* *
107696 TTCTCTCATAGCTTTGCTAAGCT-TTT-TCA
1 TTCTCTAATAACTTTGCTAAGCTATTTCTCA
107725 TTCTCTAATAACTTTGCTAAGCTATTTCTCA
1 TTCTCTAATAACTTTGCTAAGCTATTTCTCA
107756 TT
1 TT
107758 ATGGTTTTTC
Statistics
Matches: 29, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
29 21 0.72
30 3 0.10
31 5 0.17
ACGTcount: A:0.21, C:0.23, G:0.08, T:0.48
Consensus pattern (31 bp):
TTCTCTAATAACTTTGCTAAGCTATTTCTCA
Found at i:108865 original size:30 final size:28
Alignment explanation
Indices: 108829--108927 Score: 96
Period size: 30 Copynumber: 3.5 Consensus size: 28
108819 CGCTATTCTA
108829 AGCTTTGCTAAGCTTTACCTTTTCTCTCAT
1 AGCTTTGCTAAGCTTTA-C-TTTCTCTCAT
*
108859 AGCTTTGCTAAGC--TA-TTTCTCATCCT
1 AGCTTTGCTAAGCTTTACTTTCTC-TCAT
* * * *
108885 TGCTTTGCTAAGCTTTTTCATTCTCTAAT
1 AGCTTTGCTAAGC-TTTACTTTCTCTCAT
108914 AGCTTTGCTAAGCT
1 AGCTTTGCTAAGCT
108928 ATTTCTCATT
Statistics
Matches: 57, Mismatches: 7, Indels: 12
0.75 0.09 0.16
Matches are distributed among these distances:
25 6 0.11
26 15 0.26
28 3 0.05
29 15 0.26
30 18 0.32
ACGTcount: A:0.18, C:0.24, G:0.12, T:0.45
Consensus pattern (28 bp):
AGCTTTGCTAAGCTTTACTTTCTCTCAT
Found at i:108891 original size:26 final size:25
Alignment explanation
Indices: 108847--108962 Score: 92
Period size: 26 Copynumber: 4.4 Consensus size: 25
108837 TAAGCTTTAC
* *
108847 CTTTTCTC-TCATAGCTTTGCTAAG
1 CTTTTCTCATCCTTGCTTTGCTAAG
108871 CTATTTCTCATCCTTGCTTTGCTAAG
1 CT-TTTCTCATCCTTGCTTTGCTAAG
108897 CTTTT-TCATTCTCTAATAGCTTTGCTAAG
1 CTTTTCTCA-TC-CT--T-GCTTTGCTAAG
* ** *
108926 CTATTTCTCATTCTAACTTTTCTAAG
1 CT-TTTCTCATCCTTGCTTTGCTAAG
108952 TCTTTTCTCAT
1 -CTTTTCTCAT
108963 ATTCCTTCTC
Statistics
Matches: 76, Mismatches: 6, Indels: 18
0.76 0.06 0.18
Matches are distributed among these distances:
24 5 0.07
25 11 0.14
26 35 0.46
27 2 0.03
28 1 0.01
29 15 0.20
30 4 0.05
31 3 0.04
ACGTcount: A:0.18, C:0.24, G:0.09, T:0.49
Consensus pattern (25 bp):
CTTTTCTCATCCTTGCTTTGCTAAG
Found at i:108940 original size:29 final size:29
Alignment explanation
Indices: 108857--108941 Score: 108
Period size: 29 Copynumber: 3.0 Consensus size: 29
108847 CTTTTCTCTC
*
108857 ATAGCTTTGCTAAGCTATTTCTCATCCT-
1 ATAGCTTTGCTAAGCTATTTCTCATTCTA
108885 -T-GCTTTGCTAAGCT-TTT-TCATTCTCTA
1 ATAGCTTTGCTAAGCTATTTCTCA-T-TCTA
108912 ATAGCTTTGCTAAGCTATTTCTCATTCTA
1 ATAGCTTTGCTAAGCTATTTCTCATTCTA
108941 A
1 A
108942 CTTTTCTAAG
Statistics
Matches: 49, Mismatches: 1, Indels: 13
0.78 0.02 0.21
Matches are distributed among these distances:
24 3 0.06
25 4 0.08
26 15 0.31
27 1 0.02
28 1 0.02
29 18 0.37
30 4 0.08
31 3 0.06
ACGTcount: A:0.21, C:0.22, G:0.11, T:0.46
Consensus pattern (29 bp):
ATAGCTTTGCTAAGCTATTTCTCATTCTA
Found at i:108951 original size:55 final size:55
Alignment explanation
Indices: 108823--108962 Score: 172
Period size: 55 Copynumber: 2.5 Consensus size: 55
108813 CAACATCGCT
** * *
108823 ATTCTAAGCTTTGCTAAGCTTTACCTTTTCTCTCATAGCTTTGCTAAGCTATTTCTC
1 ATTCTAA-CTTTGCTAAGCTTTTTC-ATTCTCTAATAGCTTTGCTAAGCTATTTCTC
* **
108880 ATCCTTGCTTTGCTAAGCTTTTTCATTCTCTAATAGCTTTGCTAAGCTATTTCTC
1 ATTCTAACTTTGCTAAGCTTTTTCATTCTCTAATAGCTTTGCTAAGCTATTTCTC
*
108935 ATTCTAACTTTTCTAAGTCTTTTCTCAT
1 ATTCTAACTTTGCTAAG-CTTTT-TCAT
108963 ATTCCTTCTC
Statistics
Matches: 70, Mismatches: 11, Indels: 4
0.82 0.13 0.05
Matches are distributed among these distances:
55 42 0.60
56 20 0.29
57 8 0.11
ACGTcount: A:0.19, C:0.24, G:0.09, T:0.48
Consensus pattern (55 bp):
ATTCTAACTTTGCTAAGCTTTTTCATTCTCTAATAGCTTTGCTAAGCTATTTCTC
Found at i:109546 original size:22 final size:22
Alignment explanation
Indices: 109516--109558 Score: 61
Period size: 22 Copynumber: 2.0 Consensus size: 22
109506 TATTGTGACA
*
109516 TAATTTTACA-CATGAAAATTTG
1 TAATCTTACACCAT-AAAATTTG
109538 TAATCTTACACCATAAAATTT
1 TAATCTTACACCATAAAATTT
109559 TTAGTCATCT
Statistics
Matches: 19, Mismatches: 1, Indels: 2
0.86 0.05 0.09
Matches are distributed among these distances:
22 16 0.84
23 3 0.16
ACGTcount: A:0.42, C:0.14, G:0.05, T:0.40
Consensus pattern (22 bp):
TAATCTTACACCATAAAATTTG
Found at i:111929 original size:18 final size:18
Alignment explanation
Indices: 111906--111963 Score: 64
Period size: 18 Copynumber: 3.2 Consensus size: 18
111896 CATTACAAGC
111906 AGGGAGACAGAAGA-GGAG
1 AGGGAGA-AGAAGAGGGAG
* *
111924 AGGGAGAGGGAGAGGGAG
1 AGGGAGAAGAAGAGGGAG
* *
111942 AGGGAGAGGGAGAGGGAG
1 AGGGAGAAGAAGAGGGAG
111960 AGGG
1 AGGG
111964 GAGGTCATAG
Statistics
Matches: 37, Mismatches: 2, Indels: 2
0.90 0.05 0.05
Matches are distributed among these distances:
17 4 0.11
18 33 0.89
ACGTcount: A:0.36, C:0.02, G:0.62, T:0.00
Consensus pattern (18 bp):
AGGGAGAAGAAGAGGGAG
Found at i:111931 original size:6 final size:6
Alignment explanation
Indices: 111920--111967 Score: 89
Period size: 6 Copynumber: 8.2 Consensus size: 6
111910 AGACAGAAGA
111920 GGAGAG GGAGAG GGAGAG GGAGAG GGAGAG GGAGAG GGAGAG GG-GAG
1 GGAGAG GGAGAG GGAGAG GGAGAG GGAGAG GGAGAG GGAGAG GGAGAG
111967 G
1 G
111968 TCATAGTTTT
Statistics
Matches: 42, Mismatches: 0, Indels: 1
0.98 0.00 0.02
Matches are distributed among these distances:
5 4 0.10
6 38 0.90
ACGTcount: A:0.31, C:0.00, G:0.69, T:0.00
Consensus pattern (6 bp):
GGAGAG
Found at i:112130 original size:16 final size:17
Alignment explanation
Indices: 112101--112134 Score: 52
Period size: 17 Copynumber: 2.0 Consensus size: 17
112091 CATCGCACAA
112101 TTCTCTTCATTTTTCTTT
1 TTCTCTTCATTTTT-TTT
112119 TTCT-TTCATTTTTTTT
1 TTCTCTTCATTTTTTTT
112135 ACATAATTTT
Statistics
Matches: 16, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
16 3 0.19
17 9 0.56
18 4 0.25
ACGTcount: A:0.06, C:0.18, G:0.00, T:0.76
Consensus pattern (17 bp):
TTCTCTTCATTTTTTTT
Found at i:114756 original size:24 final size:23
Alignment explanation
Indices: 114705--114764 Score: 77
Period size: 23 Copynumber: 2.6 Consensus size: 23
114695 TTTCAGAATA
*
114705 AAAAATTCTTGTTTACCATAACCG
1 AAAAACTC-TGTTTACCATAACCG
*
114729 AAAAACTCTGTTTACCAGT-GCCG
1 AAAAACTCTGTTTACCA-TAACCG
114752 AAAAACTCTGTTT
1 AAAAACTCTGTTT
114765 CTACAGTAAC
Statistics
Matches: 33, Mismatches: 2, Indels: 3
0.87 0.05 0.08
Matches are distributed among these distances:
23 25 0.76
24 8 0.24
ACGTcount: A:0.35, C:0.22, G:0.12, T:0.32
Consensus pattern (23 bp):
AAAAACTCTGTTTACCATAACCG
Found at i:123307 original size:93 final size:93
Alignment explanation
Indices: 123148--123333 Score: 363
Period size: 93 Copynumber: 2.0 Consensus size: 93
123138 AAGAAAGCCA
123148 AAGTCTGGTGCATAAAAGTTGAATAGACAAGACTACCTAAACCCATTGTCTGACATATATGATGC
1 AAGTCTGGTGCATAAAAGTTGAATAGACAAGACTACCTAAACCCATTGTCTGACATATATGATGC
*
123213 TTAAGAGCAGCTCCCATTGACTGCTGAG
66 TTAAGAGCAGCTCCCATTGACTACTGAG
123241 AAGTCTGGTGCATAAAAGTTGAATAGACAAGACTACCTAAACCCATTGTCTGACATATATGATGC
1 AAGTCTGGTGCATAAAAGTTGAATAGACAAGACTACCTAAACCCATTGTCTGACATATATGATGC
123306 TTAAGAGCAGCTCCCATTGACTACTGAG
66 TTAAGAGCAGCTCCCATTGACTACTGAG
123334 GACCTTTTGC
Statistics
Matches: 92, Mismatches: 1, Indels: 0
0.99 0.01 0.00
Matches are distributed among these distances:
93 92 1.00
ACGTcount: A:0.34, C:0.20, G:0.20, T:0.26
Consensus pattern (93 bp):
AAGTCTGGTGCATAAAAGTTGAATAGACAAGACTACCTAAACCCATTGTCTGACATATATGATGC
TTAAGAGCAGCTCCCATTGACTACTGAG
Found at i:123348 original size:14 final size:14
Alignment explanation
Indices: 123327--123363 Score: 56
Period size: 14 Copynumber: 2.6 Consensus size: 14
123317 TCCCATTGAC
123327 TACTGAGGACCTTT
1 TACTGAGGACCTTT
* *
123341 TGCTGAGGACTTTT
1 TACTGAGGACCTTT
123355 TACTGAGGA
1 TACTGAGGA
123364 TATGTATGGC
Statistics
Matches: 20, Mismatches: 3, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
14 20 1.00
ACGTcount: A:0.22, C:0.16, G:0.27, T:0.35
Consensus pattern (14 bp):
TACTGAGGACCTTT
Found at i:126905 original size:210 final size:209
Alignment explanation
Indices: 126414--126929 Score: 522
Period size: 210 Copynumber: 2.4 Consensus size: 209
126404 GTGAAAAAGC
* * * * *
126414 CGGGTTTTACATGTCTCTGACTCATTAGTCCACCACATGGTAATAGCTTCTTCTGTCCTCTTTTC
1 CGGGTTTTACATCTCTTTGACTCATTAGT-CA-AAAATGGTAATAGCTTCTTC-GTCATCTTTTC
* * * * * * *
126479 CTTGCACAAAGCATTGATTAAAGAATTGAAAGTTACAACATCAGGGTGAACCTCTTCATTCATCA
63 CTTGCATAAAACATCGATTAAAGAACTGAAAGTTAAAACATCAGGATGAACCTCTTCATCCATCA
* * * *
126544 TTTTATTGAGCAAGCTTGCCGCTTCAGTCCATTTACTAGAATTGCAAAACCCATGTATTAAACAA
128 TTCTATCGAGCAAGCTTGCCGCTTCAGCCCATTTACTAGAACTGCAAAACCCATGTATTAAACAA
* * **
126609 TTGTAGGCGAAAATGTT
193 CTGTAGGAGAAAACATT
* * * * *
126626 CGGGTTTGTAC--CTCTTTGAATCACTAGTTCAAACAAT-GAAATGGCTTCTTCGGTCTTCTTTT
1 CGGGTTT-TACATCTCTTTGACTCATTAG-TCAAA-AATGGTAATAGCTTCTTC-GTCATCTTTT
* * *
126688 CCTTGCATAAAACCTCGATTAAAGAACTGAAAGTTAAAACATTAGGATGAACAC-CTTCGTCCAT
62 CCTTGCATAAAACATCGATTAAAGAACTGAAAGTTAAAACATCAGGATGAAC-CTCTTCATCCAT
** * *
126752 CATTCTATCGAGCAAGCTTGTTGCTTCAGCCCATTTACCT-GAACTGCAACATCCATGTATTAAA
126 CATTCTATCGAGCAAGCTTGCCGCTTCAGCCCATTTA-CTAGAACTGCAAAACCCATGTATTAAA
*
126816 CAACTGTAGGAGACAACATT
190 CAACTGTAGGAGAAAACATT
* * * *
126836 -GGGTTTTACATCTCTTTGACTCATTAGCTCTAAGATGGTAATAGCTTCATCGATCATCTTTTTC
1 CGGGTTTTACATCTCTTTGACTCATTAG-TCAAAAATGGTAATAGCTTCTTCG-TCATCTTTTCC
* * * *
126900 TTGCATAAAGCATTGATTAATGAATTGAAA
64 TTGCATAAAACATCGATTAAAGAACTGAAA
126930 ATCACATCAT
Statistics
Matches: 247, Mismatches: 48, Indels: 20
0.78 0.15 0.06
Matches are distributed among these distances:
208 3 0.01
209 9 0.04
210 205 0.83
211 19 0.08
212 8 0.03
213 3 0.01
ACGTcount: A:0.29, C:0.21, G:0.16, T:0.34
Consensus pattern (209 bp):
CGGGTTTTACATCTCTTTGACTCATTAGTCAAAAATGGTAATAGCTTCTTCGTCATCTTTTCCTT
GCATAAAACATCGATTAAAGAACTGAAAGTTAAAACATCAGGATGAACCTCTTCATCCATCATTC
TATCGAGCAAGCTTGCCGCTTCAGCCCATTTACTAGAACTGCAAAACCCATGTATTAAACAACTG
TAGGAGAAAACATT
Found at i:135241 original size:14 final size:14
Alignment explanation
Indices: 135222--135248 Score: 54
Period size: 14 Copynumber: 1.9 Consensus size: 14
135212 CACTTTATAT
135222 TGGATATGGATTAA
1 TGGATATGGATTAA
135236 TGGATATGGATTA
1 TGGATATGGATTA
135249 GTGCATCCTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 13 1.00
ACGTcount: A:0.33, C:0.00, G:0.30, T:0.37
Consensus pattern (14 bp):
TGGATATGGATTAA
Found at i:136570 original size:71 final size:67
Alignment explanation
Indices: 136463--136625 Score: 148
Period size: 71 Copynumber: 2.4 Consensus size: 67
136453 ATCATTTGAT
* * * * * * ** * *
136463 GAATCTAAATGGATGGTTGTAATTAAGACTTGTAAAATTTGTTAATCTTACACGGAAATATAGTA
1 GAATTTAAATGGATGATTGTGATTAAGAATTATAAAACTCATTAATCTT--ACGCAAAAATAGTA
136528 ATAGAG
64 A-AG-G
*
136534 GAATTTAAATGGATGATTGTGATTAA-AATATATAAAACTCATTGATCTTACGCAAAAATAGTAA
1 GAATTTAAATGGATGATTGTGATTAAGAAT-TATAAAACTCATTAATCTTACGCAAAAATAGTAA
* *
136598 CGT
65 AGG
*
136601 GAATTTAAATTGATGATTGTGATTA
1 GAATTTAAATGGATGATTGTGATTA
136626 TAGGTATAGT
Statistics
Matches: 77, Mismatches: 14, Indels: 6
0.79 0.14 0.06
Matches are distributed among these distances:
67 24 0.31
68 1 0.01
69 13 0.17
70 2 0.03
71 37 0.48
ACGTcount: A:0.40, C:0.07, G:0.18, T:0.35
Consensus pattern (67 bp):
GAATTTAAATGGATGATTGTGATTAAGAATTATAAAACTCATTAATCTTACGCAAAAATAGTAAA
GG
Found at i:155285 original size:23 final size:23
Alignment explanation
Indices: 155259--155306 Score: 69
Period size: 23 Copynumber: 2.1 Consensus size: 23
155249 ATAAAGTACA
*
155259 ATAACATACTAGGTAGCGCTTAT
1 ATAACATAATAGGTAGCGCTTAT
**
155282 ATAATGTAATAGGTAGCGCTTAT
1 ATAACATAATAGGTAGCGCTTAT
155305 AT
1 AT
155307 TTACCTATTT
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
23 22 1.00
ACGTcount: A:0.35, C:0.12, G:0.19, T:0.33
Consensus pattern (23 bp):
ATAACATAATAGGTAGCGCTTAT
Found at i:156056 original size:18 final size:18
Alignment explanation
Indices: 156033--156069 Score: 56
Period size: 18 Copynumber: 2.1 Consensus size: 18
156023 CGAAATATAT
156033 ATTGAAATTCAAACTCAA
1 ATTGAAATTCAAACTCAA
* *
156051 ATTGAAATTTAAATTCAA
1 ATTGAAATTCAAACTCAA
156069 A
1 A
156070 CTCCAATTAC
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
18 17 1.00
ACGTcount: A:0.51, C:0.11, G:0.05, T:0.32
Consensus pattern (18 bp):
ATTGAAATTCAAACTCAA
Found at i:156299 original size:23 final size:23
Alignment explanation
Indices: 156273--156337 Score: 85
Period size: 23 Copynumber: 2.8 Consensus size: 23
156263 ATGCGAGATA
156273 GATACCTATTACATTATATAAAC
1 GATACCTATTACATTATATAAAC
* **
156296 GATACATATTACATTATATAAGG
1 GATACCTATTACATTATATAAAC
* *
156319 GCTACCTATTACATCATAT
1 GATACCTATTACATTATAT
156338 GTTTACCTAT
Statistics
Matches: 36, Mismatches: 6, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
23 36 1.00
ACGTcount: A:0.40, C:0.17, G:0.08, T:0.35
Consensus pattern (23 bp):
GATACCTATTACATTATATAAAC
Found at i:156721 original size:21 final size:22
Alignment explanation
Indices: 156696--156747 Score: 77
Period size: 23 Copynumber: 2.3 Consensus size: 22
156686 ACACTTTACA
*
156696 ATATAACCACTACCTATTACATT
1 ATATAAACA-TACCTATTACATT
156719 ATATAAACGATACCTATTACATT
1 ATATAAAC-ATACCTATTACATT
156742 ATATAA
1 ATATAA
156748 GGGCTACCTA
Statistics
Matches: 27, Mismatches: 1, Indels: 2
0.90 0.03 0.07
Matches are distributed among these distances:
23 26 0.96
24 1 0.04
ACGTcount: A:0.44, C:0.19, G:0.02, T:0.35
Consensus pattern (22 bp):
ATATAAACATACCTATTACATT
Found at i:156732 original size:23 final size:23
Alignment explanation
Indices: 156706--156768 Score: 90
Period size: 23 Copynumber: 2.7 Consensus size: 23
156696 ATATAACCAC
156706 TACCTATTACATTATATAAACGA
1 TACCTATTACATTATATAAACGA
** *
156729 TACCTATTACATTATATAAGGGC
1 TACCTATTACATTATATAAACGA
*
156752 TACCTATTACATCATAT
1 TACCTATTACATTATAT
156769 GTTTACCTAT
Statistics
Matches: 36, Mismatches: 4, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
23 36 1.00
ACGTcount: A:0.38, C:0.19, G:0.06, T:0.37
Consensus pattern (23 bp):
TACCTATTACATTATATAAACGA
Found at i:159865 original size:184 final size:184
Alignment explanation
Indices: 159326--159996 Score: 1254
Period size: 184 Copynumber: 3.7 Consensus size: 184
159316 TTTTAAATGG
* *
159326 TATGGACATAAAGTACCGACACAATATTATAAAGTGTCGATATAGGTTGTAGACCTATTCGCTCA
1 TATGGACATAAAGTACCGACACAATATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCA
159391 TAAAACCGGTATATTTATACCGGTTATATTACAAAATTATCTATTACATTATAATTATGGGTTCC
66 TAAAACCGGTATATTTATACCGGTTATATTACAAAATTATCTATTACATTATAATTATGGGTTCC
159456 GATGTGTAAAATGTCGACACTTTTTTAAATCGTATCGACACATTTTTCTTCCAA
131 GATGTGTAAAATGTCGACACTTTTTTAAATCGTATCGACACATTTTTCTTCCAA
159510 TATGGACATAAAGTACCGACACAATATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCA
1 TATGGACATAAAGTACCGACACAATATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCA
*
159575 TAAGACCGGTATA-TTATACCGGTTATATTACAAAATTATCTATTACATTATAATTATGGGTTCC
66 TAAAACCGGTATATTTATACCGGTTATATTACAAAATTATCTATTACATTATAATTATGGGTTCC
*
159639 GATGTGTAAAATGTCGACACTTTTTTAAATTGTATCGACACATTTTTCTTCCAA
131 GATGTGTAAAATGTCGACACTTTTTTAAATCGTATCGACACATTTTTCTTCCAA
* *
159693 TATGGACATAAAGTACCGACACAATATTAAAAAGTGTCGATATAGGTTGTAGACCTATTGGCTCA
1 TATGGACATAAAGTACCGACACAATATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCA
159758 TAAAACCGGTATATTTATACCGGTTATATTACAAAATTATCTATTACATTATAATTATGGGTTCC
66 TAAAACCGGTATATTTATACCGGTTATATTACAAAATTATCTATTACATTATAATTATGGGTTCC
159823 GATGTGTAAAATGTCGACACTTTTTTAAATCGTATCGACACATTTTTCTTCCAA
131 GATGTGTAAAATGTCGACACTTTTTTAAATCGTATCGACACATTTTTCTTCCAA
159877 TATGGACATAAAGTACCGACACAATATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCA
1 TATGGACATAAAGTACCGACACAATATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCA
* **
159942 TAAGACCGGTATATTTATACCGGTTATATTACAAAATTATCTATTTTATTATAAT
66 TAAAACCGGTATATTTATACCGGTTATATTACAAAATTATCTATTACATTATAAT
159997 ATGTTGAAAG
Statistics
Matches: 473, Mismatches: 13, Indels: 2
0.97 0.03 0.00
Matches are distributed among these distances:
183 179 0.38
184 294 0.62
ACGTcount: A:0.34, C:0.16, G:0.15, T:0.35
Consensus pattern (184 bp):
TATGGACATAAAGTACCGACACAATATTAAAAAGTGTCGATATAGGTTGTAGACCTATTCGCGCA
TAAAACCGGTATATTTATACCGGTTATATTACAAAATTATCTATTACATTATAATTATGGGTTCC
GATGTGTAAAATGTCGACACTTTTTTAAATCGTATCGACACATTTTTCTTCCAA
Found at i:161184 original size:199 final size:199
Alignment explanation
Indices: 160455--161424 Score: 1823
Period size: 200 Copynumber: 4.9 Consensus size: 199
160445 AGATAATTGT
* *
160455 ACCGATATAATTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
1 ACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
*
160520 TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATTGGTGCACCTTGTTTTTAATTCAT
66 TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAATTCAT
160585 TCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTCA
131 TCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTCA
160650 TAAA
196 TAAA
160654 ACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
1 ACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
160719 TTTTGGGATCGACACTTTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAATTCA
66 TTTTGGGATCGACAC-TTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAATTCA
160784 TTCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTC
130 TTCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTC
160849 ATAAA
195 ATAAA
*
160854 ACCGGTATAATTGTACCGGTTATATTAAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
1 ACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
160919 TTTTGGGATCGACACTTTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAATTCA
66 TTTTGGGATCGACAC-TTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAATTCA
*
160984 TTCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACTTATTCTCTC
130 TTCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTC
161049 ATAAA
195 ATAAA
161054 ACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
1 ACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
*
161119 TTTTGGGATCGACACGTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAATTCAT
66 TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAATTCAT
*
161184 TCTGGGAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTCA
131 TCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTCA
161249 TAAA
196 TAAA
*
161253 ACCGGTATAATTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
1 ACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
* *
161318 TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATTGATGCACCTTGTTTTTAATTCAT
66 TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAATTCAT
*
161383 TCTGGAAAAAAAATATCGACACAAACTATATTAGTATCGACA
131 TCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACA
161425 TGACCCTTAA
Statistics
Matches: 755, Mismatches: 15, Indels: 2
0.98 0.02 0.00
Matches are distributed among these distances:
199 360 0.48
200 395 0.52
ACGTcount: A:0.32, C:0.15, G:0.15, T:0.38
Consensus pattern (199 bp):
ACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAATTCAT
TCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTCA
TAAA
Found at i:161198 original size:399 final size:399
Alignment explanation
Indices: 160455--161424 Score: 1843
Period size: 399 Copynumber: 2.4 Consensus size: 399
160445 AGATAATTGT
*
160455 ACCGATATAATTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
1 ACCGGTATAATTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
160520 TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATTGGTGCACCTTGTTTTTAATTCAT
66 TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATTGGTGCACCTTGTTTTTAATTCAT
160585 TCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTCA
131 TCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTCA
160650 TAAAACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCG
196 TAAAACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCG
*
160715 ATGATTTTGGGATCGACACTTTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAA
261 ATGATTTTGGGATCGACACTGTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAA
160780 TTCATTCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTC
326 TTCATTCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTC
160845 TCTCATAAA
391 TCTCATAAA
* *
160854 ACCGGTATAATTGTACCGGTTATATTAAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
1 ACCGGTATAATTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
*
160919 TTTTGGGATCGACACTTTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAATTCA
66 TTTTGGGATCGACAC-TTTTTATATATGGATCGACACTTTATTGGTGCACCTTGTTTTTAATTCA
*
160984 TTCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACTTATTCTCTC
130 TTCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTC
161049 ATAAAACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTC
195 ATAAAACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTC
161114 GATGATTTTGGGATCGACAC-GTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTA
260 GATGATTTTGGGATCGACACTGTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTA
*
161178 ATTCATTCTGGGAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATT
325 ATTCATTCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATT
161243 CTCTCATAAA
390 CTCTCATAAA
161253 ACCGGTATAATTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
1 ACCGGTATAATTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
*
161318 TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATTGATGCACCTTGTTTTTAATTCAT
66 TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATTGGTGCACCTTGTTTTTAATTCAT
*
161383 TCTGGAAAAAAAATATCGACACAAACTATATTAGTATCGACA
131 TCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACA
161425 TGACCCTTAA
Statistics
Matches: 558, Mismatches: 12, Indels: 3
0.97 0.02 0.01
Matches are distributed among these distances:
398 89 0.16
399 272 0.49
400 197 0.35
ACGTcount: A:0.32, C:0.15, G:0.15, T:0.38
Consensus pattern (399 bp):
ACCGGTATAATTGTACCGGTTAGATTGAAAAATTACATATTACATTATACTTTTGGGTTCGATGA
TTTTGGGATCGACACTTTTTATATATGGATCGACACTTTATTGGTGCACCTTGTTTTTAATTCAT
TCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTCTCTCA
TAAAACCGGTATAATTGTACCGGTTAGATTAAAAAATTACATATTACATTATACTTTTGGGTTCG
ATGATTTTGGGATCGACACTGTTTTATATATGGATCGACACTTTATGGGTGCACCTTGTTTTTAA
TTCATTCTGGAAAAAAAATATCGACACAAACTATATTAGTGTCGACACATTATTTAGACATATTC
TCTCATAAA
Found at i:161533 original size:19 final size:19
Alignment explanation
Indices: 161506--161550 Score: 72
Period size: 19 Copynumber: 2.4 Consensus size: 19
161496 ATTCACATAA
*
161506 AAAAATATAAATCGTATAC
1 AAAATTATAAATCGTATAC
*
161525 AAAATTATAAATCTTATAC
1 AAAATTATAAATCGTATAC
161544 AAAATTA
1 AAAATTA
161551 ACTCGACATT
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
19 24 1.00
ACGTcount: A:0.58, C:0.09, G:0.02, T:0.31
Consensus pattern (19 bp):
AAAATTATAAATCGTATAC
Found at i:163377 original size:33 final size:33
Alignment explanation
Indices: 163340--163405 Score: 96
Period size: 33 Copynumber: 2.0 Consensus size: 33
163330 CATCTTAATA
*
163340 TCACCCCTTAACACCGAAACTTCTTTCACCACT
1 TCACCCCTCAACACCGAAACTTCTTTCACCACT
***
163373 TCACCCCTCAACACCTCTACTTCTTTCACCACT
1 TCACCCCTCAACACCGAAACTTCTTTCACCACT
163406 CCATCTATTT
Statistics
Matches: 29, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
33 29 1.00
ACGTcount: A:0.24, C:0.45, G:0.02, T:0.29
Consensus pattern (33 bp):
TCACCCCTCAACACCGAAACTTCTTTCACCACT
Found at i:165548 original size:23 final size:23
Alignment explanation
Indices: 165522--165568 Score: 60
Period size: 23 Copynumber: 2.0 Consensus size: 23
165512 TATTTTCAGA
*
165522 GGATAT-TTAGCTTATATTTCATC
1 GGATATGTTA-CTTATATTTAATC
*
165545 GGATATGTTATTTATATTTAATC
1 GGATATGTTACTTATATTTAATC
165568 G
1 G
165569 ATACAAATAC
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
23 18 0.86
24 3 0.14
ACGTcount: A:0.28, C:0.09, G:0.15, T:0.49
Consensus pattern (23 bp):
GGATATGTTACTTATATTTAATC
Found at i:165754 original size:20 final size:19
Alignment explanation
Indices: 165708--165754 Score: 58
Period size: 20 Copynumber: 2.4 Consensus size: 19
165698 TCTGGTATCA
*
165708 TTTTACCGTTTTTATCATT
1 TTTTACCGGTTTTATCATT
*
165727 TTGATACCGGTTTTATCATAT
1 TT-TTACCGGTTTTATCAT-T
165748 TTTTACC
1 TTTTACC
165755 TGTTATATCG
Statistics
Matches: 23, Mismatches: 3, Indels: 3
0.79 0.10 0.10
Matches are distributed among these distances:
19 2 0.09
20 18 0.78
21 3 0.13
ACGTcount: A:0.19, C:0.17, G:0.09, T:0.55
Consensus pattern (19 bp):
TTTTACCGGTTTTATCATT
Found at i:165901 original size:20 final size:20
Alignment explanation
Indices: 165875--165920 Score: 76
Period size: 20 Copynumber: 2.3 Consensus size: 20
165865 CACTTTTAAA
165875 TTTACCGGTTTTATCAT-TT
1 TTTACCGGTTTTATCATATT
165894 TGTTACCGGTTTTATCATATT
1 T-TTACCGGTTTTATCATATT
165915 TTTACC
1 TTTACC
165921 TGGTATATCG
Statistics
Matches: 25, Mismatches: 0, Indels: 3
0.89 0.00 0.11
Matches are distributed among these distances:
19 1 0.04
20 21 0.84
21 3 0.12
ACGTcount: A:0.17, C:0.17, G:0.11, T:0.54
Consensus pattern (20 bp):
TTTACCGGTTTTATCATATT
Found at i:172889 original size:60 final size:60
Alignment explanation
Indices: 172766--172937 Score: 141
Period size: 60 Copynumber: 2.9 Consensus size: 60
172756 GTCCTTCAAT
* * * * **
172766 TATGACAATCATTTTAAATTAGTCCGTAAACTTTTAAACATTCCAATTTCATTCTTATTC
1 TATGACTATCATTCTAAATTAGTCCGTAAACTTTTAAACATTCCAATTTCATCCCTAAAC
* * * * *
172826 TATGACTATCATTCTAAATTAGTCC-TCAAACTTTTGAATATTTCATTTTTATCCCTAAAC
1 TATGACTATCATTCTAAATTAGTCCGT-AAACTTTTAAACATTCCAATTTCATCCCTAAAC
* * * * * * *
172886 TATGATCT-TCATTCCAAATTGGTCCCATAAATTTTTGAACATTTCAAATTCA
1 TATGA-CTATCATTCTAAATTAGT-CCGTAAACTTTTAAACATTCCAATTTCA
172938 ACCCACATTA
Statistics
Matches: 90, Mismatches: 18, Indels: 7
0.78 0.16 0.06
Matches are distributed among these distances:
59 1 0.01
60 65 0.72
61 23 0.26
62 1 0.01
ACGTcount: A:0.33, C:0.19, G:0.06, T:0.42
Consensus pattern (60 bp):
TATGACTATCATTCTAAATTAGTCCGTAAACTTTTAAACATTCCAATTTCATCCCTAAAC
Found at i:173174 original size:60 final size:60
Alignment explanation
Indices: 173077--173232 Score: 161
Period size: 60 Copynumber: 2.6 Consensus size: 60
173067 TGAATTAGGG
* * * ** * * *
173077 AATGAAATTGAAAGATTCAATAGTTTGGGGATCAATTTAGAATAAGAATCATAGTTTGGG
1 AATGAAATTGGAATATTCAAAAGTTTAAGGATTAATTTAGAATAAGAATCATAGTTTAGA
* * * * *
173137 GATGAAGTTGGAATATTCAAAAGTTTAAGGATTAATTTATAATGAGAGTCATAGTTTAGA
1 AATGAAATTGGAATATTCAAAAGTTTAAGGATTAATTTAGAATAAGAATCATAGTTTAGA
* * *
173197 AATGAAATTGGAATGTT-TAAAGTTTAAGGACTAATT
1 AATGAAATTGGAATATTCAAAAGTTTAAGGATTAATT
173233 AAAATGAGGA
Statistics
Matches: 78, Mismatches: 18, Indels: 1
0.80 0.19 0.01
Matches are distributed among these distances:
59 17 0.22
60 61 0.78
ACGTcount: A:0.40, C:0.04, G:0.22, T:0.34
Consensus pattern (60 bp):
AATGAAATTGGAATATTCAAAAGTTTAAGGATTAATTTAGAATAAGAATCATAGTTTAGA
Found at i:176468 original size:10 final size:10
Alignment explanation
Indices: 176453--176480 Score: 56
Period size: 10 Copynumber: 2.8 Consensus size: 10
176443 CATTTATGTT
176453 TGTTCGTTAA
1 TGTTCGTTAA
176463 TGTTCGTTAA
1 TGTTCGTTAA
176473 TGTTCGTT
1 TGTTCGTT
176481 TACTTTCGTT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
10 18 1.00
ACGTcount: A:0.14, C:0.11, G:0.21, T:0.54
Consensus pattern (10 bp):
TGTTCGTTAA
Found at i:176714 original size:10 final size:10
Alignment explanation
Indices: 176699--176815 Score: 65
Period size: 10 Copynumber: 10.4 Consensus size: 10
176689 GTTGTTGTAG
176699 TTTATGTTCA
1 TTTATGTTCA
176709 TTTATGTTCA
1 TTTATGTTCA
*
176719 TTTGTTTTGTTCA
1 --T-TTATGTTCA
176732 TTTATGTT-A
1 TTTATGTTCA
176741 GTTTATGTTCA
1 -TTTATGTTCA
*
176752 TTTATTGTGTTCG
1 TTTA---TGTTCA
*
176765 TTTACATTCGTTCG
1 TTT--A-T-GTTCA
*
176779 TTTATGTTCG
1 TTTATGTTCA
176789 TTTATTGTATTCA
1 TTTA-TG--TTCA
176802 TTTATGTTCA
1 TTTATGTTCA
176812 TTTA
1 TTTA
176816 CTTCCGTTCT
Statistics
Matches: 88, Mismatches: 5, Indels: 28
0.73 0.04 0.23
Matches are distributed among these distances:
9 1 0.01
10 45 0.51
11 5 0.06
12 4 0.05
13 24 0.27
14 8 0.09
15 1 0.01
ACGTcount: A:0.16, C:0.09, G:0.14, T:0.61
Consensus pattern (10 bp):
TTTATGTTCA
Found at i:176736 original size:33 final size:33
Alignment explanation
Indices: 176699--176815 Score: 128
Period size: 33 Copynumber: 3.4 Consensus size: 33
176689 GTTGTTGTAG
* *
176699 TTTATGTTCATTTATGTTCATTTGTTTTGTTCA
1 TTTATGTTCATTTATGTTCATTTATTGTGTTCA
*
176732 TTTATGTT-AGTTTATGTTCATTTATTGTGTTCG
1 TTTATGTTCA-TTTATGTTCATTTATTGTGTTCA
* * *
176765 TTTACATTCGTTCGTTTATGTTCGTTTATTGTATTCA
1 TTT--A-T-GTTCATTTATGTTCATTTATTGTGTTCA
176802 TTTATGTTCATTTA
1 TTTATGTTCATTTA
176816 CTTCCGTTCT
Statistics
Matches: 70, Mismatches: 8, Indels: 12
0.78 0.09 0.13
Matches are distributed among these distances:
32 1 0.01
33 39 0.56
34 1 0.01
35 2 0.03
36 1 0.01
37 26 0.37
ACGTcount: A:0.16, C:0.09, G:0.14, T:0.61
Consensus pattern (33 bp):
TTTATGTTCATTTATGTTCATTTATTGTGTTCA
Found at i:176809 original size:23 final size:21
Alignment explanation
Indices: 176698--176833 Score: 87
Period size: 23 Copynumber: 6.0 Consensus size: 21
176688 TGTTGTTGTA
176698 GTTTA-TGTTCATTTATGTTC
1 GTTTATTGTTCATTTATGTTC
* * *
176718 ATTTGTTTTGTTCATTTATGTTA
1 -GTT-TATTGTTCATTTATGTTC
176741 GTTTA-TGTTCATTTATTGTGTTC
1 GTTTATTGTTCATTTA---TGTTC
*
176764 GTTTACATTCGTTCGTTTATGTTC
1 GTTT--ATT-GTTCATTTATGTTC
176788 GTTTATTGTATTCATTTATGTTC
1 GTTTATTG--TTCATTTATGTTC
* *
176811 ATTTACTTCCGTTCTTTTATGTT
1 GTTTA-TT--GTTCATTTATGTT
176834 TGTTCATTTG
Statistics
Matches: 91, Mismatches: 10, Indels: 25
0.72 0.08 0.20
Matches are distributed among these distances:
20 10 0.11
21 4 0.04
22 6 0.07
23 38 0.42
24 22 0.24
25 1 0.01
26 2 0.02
27 8 0.09
ACGTcount: A:0.15, C:0.11, G:0.14, T:0.60
Consensus pattern (21 bp):
GTTTATTGTTCATTTATGTTC
Found at i:181803 original size:34 final size:32
Alignment explanation
Indices: 181750--181819 Score: 104
Period size: 34 Copynumber: 2.1 Consensus size: 32
181740 ACCTTACAAC
*
181750 TCCCTAGTTTTTCCGGGCTAAACTAGAACCTT
1 TCCCTAGTTTTACCGGGCTAAACTAGAACCTT
*
181782 TCCCTAGCTTTTACACGGGCTAAGCTAGAACCTT
1 TCCCTAG-TTTTAC-CGGGCTAAACTAGAACCTT
181816 TCCC
1 TCCC
181820 CTTTACAAAA
Statistics
Matches: 34, Mismatches: 2, Indels: 2
0.89 0.05 0.05
Matches are distributed among these distances:
32 7 0.21
33 5 0.15
34 22 0.65
ACGTcount: A:0.21, C:0.31, G:0.16, T:0.31
Consensus pattern (32 bp):
TCCCTAGTTTTACCGGGCTAAACTAGAACCTT
Found at i:182128 original size:21 final size:21
Alignment explanation
Indices: 182102--182143 Score: 66
Period size: 21 Copynumber: 2.0 Consensus size: 21
182092 CCAGAATGGG
*
182102 GGGAATCGGTACCCCTTCATA
1 GGGAATCGATACCCCTTCATA
*
182123 GGGAATCGATATCCCTTCATA
1 GGGAATCGATACCCCTTCATA
182144 ATATTCAAAT
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
21 19 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (21 bp):
GGGAATCGATACCCCTTCATA
Found at i:182405 original size:32 final size:31
Alignment explanation
Indices: 182342--182433 Score: 161
Period size: 32 Copynumber: 3.0 Consensus size: 31
182332 AAATTTTGAA
182342 TAAATTCAATT-AAGTCCAAAAA-CATTTTG
1 TAAATTCAATTCAAGTCCAAAAACCATTTTG
182371 TAAATTCAATTCAAGTCCAAAAAACCATTTTG
1 TAAATTCAATTCAAGTCC-AAAAACCATTTTG
182403 TAAATTCAATTCAAGTCCAAAAACCATTTTG
1 TAAATTCAATTCAAGTCCAAAAACCATTTTG
182434 CCTTAAATTG
Statistics
Matches: 60, Mismatches: 0, Indels: 4
0.94 0.00 0.06
Matches are distributed among these distances:
29 11 0.18
30 6 0.10
31 18 0.30
32 25 0.42
ACGTcount: A:0.43, C:0.17, G:0.07, T:0.33
Consensus pattern (31 bp):
TAAATTCAATTCAAGTCCAAAAACCATTTTG
Found at i:182619 original size:23 final size:23
Alignment explanation
Indices: 182592--182639 Score: 87
Period size: 23 Copynumber: 2.1 Consensus size: 23
182582 AAGCTCCCCC
182592 TTTTTCATTAAGAAATTGAATTT
1 TTTTTCATTAAGAAATTGAATTT
*
182615 TTTTTTATTAAGAAATTGAATTT
1 TTTTTCATTAAGAAATTGAATTT
182638 TT
1 TT
182640 CAAACCAAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
23 24 1.00
ACGTcount: A:0.33, C:0.02, G:0.08, T:0.56
Consensus pattern (23 bp):
TTTTTCATTAAGAAATTGAATTT
Found at i:185312 original size:34 final size:32
Alignment explanation
Indices: 185259--185328 Score: 104
Period size: 34 Copynumber: 2.1 Consensus size: 32
185249 ACCTTACAAC
*
185259 TCCCTAGTTTTTCCGGGCTAAACTAGAACCTT
1 TCCCTAGTTTTACCGGGCTAAACTAGAACCTT
*
185291 TCCCTAGCTTTTACACGGGCTAAGCTAGAACCTT
1 TCCCTAG-TTTTAC-CGGGCTAAACTAGAACCTT
185325 TCCC
1 TCCC
185329 CTTTACAAAA
Statistics
Matches: 34, Mismatches: 2, Indels: 2
0.89 0.05 0.05
Matches are distributed among these distances:
32 7 0.21
33 5 0.15
34 22 0.65
ACGTcount: A:0.21, C:0.31, G:0.16, T:0.31
Consensus pattern (32 bp):
TCCCTAGTTTTACCGGGCTAAACTAGAACCTT
Found at i:185637 original size:21 final size:21
Alignment explanation
Indices: 185611--185652 Score: 75
Period size: 21 Copynumber: 2.0 Consensus size: 21
185601 CCAGAATGGG
*
185611 GGGAATCGGTACCCCTTCATA
1 GGGAATCGATACCCCTTCATA
185632 GGGAATCGATACCCCTTCATA
1 GGGAATCGATACCCCTTCATA
185653 ATATTCAAAT
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.26, C:0.29, G:0.21, T:0.24
Consensus pattern (21 bp):
GGGAATCGATACCCCTTCATA
Found at i:185782 original size:19 final size:19
Alignment explanation
Indices: 185758--185819 Score: 88
Period size: 19 Copynumber: 3.3 Consensus size: 19
185748 GAGCCTCGGG
*
185758 TTACTGTTCAAACAGTTAT
1 TTACTGTTCAAACAGTAAT
*
185777 TTACTGTTCAAATAGTAAT
1 TTACTGTTCAAACAGTAAT
* *
185796 TTACTGTTCAAATAGTAAA
1 TTACTGTTCAAACAGTAAT
185815 TTACT
1 TTACT
185820 ATTCGTAAAA
Statistics
Matches: 40, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
19 40 1.00
ACGTcount: A:0.35, C:0.13, G:0.10, T:0.42
Consensus pattern (19 bp):
TTACTGTTCAAACAGTAAT
Found at i:185952 original size:32 final size:31
Alignment explanation
Indices: 185889--185980 Score: 161
Period size: 32 Copynumber: 3.0 Consensus size: 31
185879 AAATTTTGAA
185889 TAAATTCAATT-AAGTCCAAAAA-CATTTTG
1 TAAATTCAATTCAAGTCCAAAAACCATTTTG
185918 TAAATTCAATTCAAGTCCAAAAAACCATTTTG
1 TAAATTCAATTCAAGTCC-AAAAACCATTTTG
185950 TAAATTCAATTCAAGTCCAAAAACCATTTTG
1 TAAATTCAATTCAAGTCCAAAAACCATTTTG
185981 CCTTAAATTG
Statistics
Matches: 60, Mismatches: 0, Indels: 4
0.94 0.00 0.06
Matches are distributed among these distances:
29 11 0.18
30 6 0.10
31 18 0.30
32 25 0.42
ACGTcount: A:0.43, C:0.17, G:0.07, T:0.33
Consensus pattern (31 bp):
TAAATTCAATTCAAGTCCAAAAACCATTTTG
Found at i:188213 original size:39 final size:40
Alignment explanation
Indices: 188158--188240 Score: 123
Period size: 39 Copynumber: 2.1 Consensus size: 40
188148 TTTACGGAGT
* * * *
188158 TTTAAAAACAACGCCTCTATACTTCCGATATATTGTGGCG
1 TTTAAAAACAACGCCTCTATAATGCAGATATATTGCGGCG
188198 TTTAAAAA-AACGCCTCTATAATGCAGATATATTGCGGCG
1 TTTAAAAACAACGCCTCTATAATGCAGATATATTGCGGCG
188237 TTTA
1 TTTA
188241 GGTAAAAAAT
Statistics
Matches: 39, Mismatches: 4, Indels: 1
0.89 0.09 0.02
Matches are distributed among these distances:
39 31 0.79
40 8 0.21
ACGTcount: A:0.33, C:0.19, G:0.16, T:0.33
Consensus pattern (40 bp):
TTTAAAAACAACGCCTCTATAATGCAGATATATTGCGGCG
Found at i:188331 original size:41 final size:40
Alignment explanation
Indices: 188186--188341 Score: 127
Period size: 41 Copynumber: 3.8 Consensus size: 40
188176 ATACTTCCGA
* * *
188186 TATATTGTGGCGTTTAA-AAAAACGCCTCTATAATGCAGA-
1 TATATTGCGGCGTTTAATAAAAACGCCTCTATTATTCA-AC
* * * *
188225 TATATTGCGGCGTTTAGGTAAAAAATGCCACTATTGTTCAAC
1 TATATTGCGGCGTTTA-AT-AAAAACGCCTCTATTATTCAAC
* ** * * *
188267 TTTATTATGGCTTTTGTAGAAAAACGCCTCTATTATTCAAC
1 TATATTGCGGCGTTT-AATAAAAACGCCTCTATTATTCAAC
188308 TATATTGCGGCGTTTACATAAAAAGCGCCTCTAT
1 TATATTGCGGCGTTTA-ATAAAAA-CGCCTCTAT
188342 AGATTACACC
Statistics
Matches: 87, Mismatches: 23, Indels: 11
0.72 0.19 0.09
Matches are distributed among these distances:
39 15 0.17
41 37 0.43
42 35 0.40
ACGTcount: A:0.31, C:0.17, G:0.17, T:0.35
Consensus pattern (40 bp):
TATATTGCGGCGTTTAATAAAAACGCCTCTATTATTCAAC
Found at i:188366 original size:83 final size:83
Alignment explanation
Indices: 188203--188373 Score: 186
Period size: 83 Copynumber: 2.1 Consensus size: 83
188193 TGGCGTTTAA
** * *
188203 AAAAACGCCTCTATAATGCAGATATATTGCGGCGTTTAGGTAAAAAATGCCACTATTGTTCAACT
1 AAAAACGCCTCTATAATGCAGATATATTGCGGCGTTTACATAAAAAACGCCACTATAGTTCAACT
* * *
188268 TTATTATGGCTTTTGTAG
66 CTATTATGGCATTTGTAC
* * * *
188286 AAAAACGCCTCTATTATTCA-ACTATATTGCGGCGTTTACATAAAAAGCGCCTCTATAGATT-AC
1 AAAAACGCCTCTATAATGCAGA-TATATTGCGGCGTTTACATAAAAAACGCCACTATAG-TTCA-
*
188349 AC-CTATTGTGGCATTTGTAC
63 ACTCTATTATGGCATTTGTAC
188369 AAAAA
1 AAAAA
188374 TGCCGCTAAT
Statistics
Matches: 73, Mismatches: 12, Indels: 6
0.80 0.13 0.07
Matches are distributed among these distances:
82 1 0.01
83 68 0.93
84 4 0.05
ACGTcount: A:0.33, C:0.18, G:0.16, T:0.33
Consensus pattern (83 bp):
AAAAACGCCTCTATAATGCAGATATATTGCGGCGTTTACATAAAAAACGCCACTATAGTTCAACT
CTATTATGGCATTTGTAC
Found at i:188430 original size:41 final size:41
Alignment explanation
Indices: 188354--188447 Score: 127
Period size: 41 Copynumber: 2.3 Consensus size: 41
188344 ATTACACCTA
* * **
188354 TTGTGGCATTTGTACAAAAATGCCGCTAATGTATAAATA-T
1 TTGTGGCGTTTGTAAAAAAATGCCGCTAAAATATAAATATT
188394 TTGTGGCGTTTGTTAAAAAAATGCCGCTAAAATATAAATATT
1 TTGTGGCGTTTG-TAAAAAAATGCCGCTAAAATATAAATATT
*
188436 TTATGGCGTTTG
1 TTGTGGCGTTTG
188448 ATAACTAAAT
Statistics
Matches: 47, Mismatches: 5, Indels: 2
0.87 0.09 0.04
Matches are distributed among these distances:
40 11 0.23
41 24 0.51
42 12 0.26
ACGTcount: A:0.33, C:0.11, G:0.19, T:0.37
Consensus pattern (41 bp):
TTGTGGCGTTTGTAAAAAAATGCCGCTAAAATATAAATATT
Found at i:188458 original size:42 final size:41
Alignment explanation
Indices: 188369--188460 Score: 121
Period size: 41 Copynumber: 2.2 Consensus size: 41
188359 GCATTTGTAC
** * *
188369 AAAAATGCCGCTAATGTATAAATATTTGTGGCGTTTGTTAA
1 AAAAATGCCGCTAAAATATAAATATTTATGGCGTTTGATAA
188410 AAAAATGCCGCTAAAATATAAATATTTTATGGCGTTTGATAA
1 AAAAATGCCGCTAAAATATAAATA-TTTATGGCGTTTGATAA
**
188452 CTAAATGCC
1 AAAAATGCC
188461 ACTATAGATT
Statistics
Matches: 44, Mismatches: 6, Indels: 1
0.86 0.12 0.02
Matches are distributed among these distances:
41 22 0.50
42 22 0.50
ACGTcount: A:0.38, C:0.12, G:0.16, T:0.34
Consensus pattern (41 bp):
AAAAATGCCGCTAAAATATAAATATTTATGGCGTTTGATAA
Found at i:189607 original size:22 final size:22
Alignment explanation
Indices: 189582--189649 Score: 91
Period size: 22 Copynumber: 3.1 Consensus size: 22
189572 ACGTTTTCAG
* *
189582 AAGCTATTATTTTCCTATTTGA
1 AAGCAATTATTTTCCTATTCGA
*
189604 AAGCAATTATTTTTCTATTCGA
1 AAGCAATTATTTTCCTATTCGA
**
189626 AAGCAATTATTTTTTTATTCGA
1 AAGCAATTATTTTCCTATTCGA
189648 AA
1 AA
189650 ACAAAAGAAC
Statistics
Matches: 42, Mismatches: 4, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
22 42 1.00
ACGTcount: A:0.32, C:0.12, G:0.09, T:0.47
Consensus pattern (22 bp):
AAGCAATTATTTTCCTATTCGA
Found at i:190400 original size:41 final size:40
Alignment explanation
Indices: 190107--190406 Score: 145
Period size: 41 Copynumber: 7.3 Consensus size: 40
190097 TTTATCATAT
* * *
190107 AAACGCCGCTATATTAATACTCTATTGCGGCGTTT-TTCACA
1 AAACGCCGCTAAATT-ACACTCTATTGCGGCGTTTGTTTA-A
* * * *
190148 CAAACGCCACTATAA--ACAATACTATTGAGGCGTTTGTTTAGT
1 -AAACGCCGCTA-AATTACACT-CTATTGCGGCGTTTGTTTA-A
* * * * ** *
190190 AAATGCCACTAAATTACTCCTCTATAGCATCGTTTGTTGAAA
1 AAACGCCGCTAAATTAC-ACTCTATTGCGGCGTTTGTT-TAA
* * *
190232 AAACGCCACTATAA--ACAAC-CTATAGCGGCGTTT-TTAAA
1 AAACGCCGCTA-AATTAC-ACTCTATTGCGGCGTTTGTTTAA
* * * *
190270 CAAACGCCGCTAAATTACCACTATGTTGAGGCGTTTGTTGAAA
1 -AAACGCCGCTAAATTA-CACTCTATTGCGGCGTTTGTT-TAA
* * *
190313 AAACGCCGCTATAA--ACTA-TCTTTTGCGGCATTT-TTGCTAT
1 AAACGCCGCTA-AATTAC-ACTCTATTGCGGCGTTTGTT--TAA
190353 AAACGCCGCTAAATTACACTCTATTGCGGCGTTTGTTTAA
1 AAACGCCGCTAAATTACACTCTATTGCGGCGTTTGTTTAA
190393 AAGACGCCGCTAAA
1 AA-ACGCCGCTAAA
190407 GTATCATTTT
Statistics
Matches: 198, Mismatches: 37, Indels: 47
0.70 0.13 0.17
Matches are distributed among these distances:
38 5 0.03
39 16 0.08
40 49 0.25
41 65 0.33
42 53 0.27
43 10 0.05
ACGTcount: A:0.31, C:0.22, G:0.16, T:0.30
Consensus pattern (40 bp):
AAACGCCGCTAAATTACACTCTATTGCGGCGTTTGTTTAA
Found at i:190404 original size:81 final size:79
Alignment explanation
Indices: 190065--190400 Score: 298
Period size: 81 Copynumber: 4.1 Consensus size: 79
190055 GCATTTTTAT
* * * * *
190065 AAAAACGCCACTATAAACAA-CATATTGTGGCATTTATCATATAAACGCCGCTATATTAATACTC
1 AAAAACGCCACTATAAACAATC-TATTGCGGCGTTT-T-TTATAAACGCCGCTAAATT-ACACTC
*
190129 TATTGCGGCGTTT-TTCA
62 TATTGCGGCGTTTGTTGA
* * * * *
190146 CACAAACGCCACTATAAACAATACTATTGAGGCGTTTGTTTAGTAAATGCCACTAAATTACTCCT
1 -AAAAACGCCACTATAAACAAT-CTATTGCGGCGTTT-TTTA-TAAACGCCGCTAAATTAC-ACT
* **
190211 CTATAGCATCGTTTGTTGA
61 CTATTGCGGCGTTTGTTGA
* * * * * *
190230 AAAAACGCCACTATAAACAACCTATAGCGGCGTTTTTAAACAAACGCCGCTAAATTACCACTATG
1 AAAAACGCCACTATAAACAATCTATTGCGGCGTTTTT-TATAAACGCCGCTAAATTA-CACTCTA
*
190295 TTGAGGCGTTTGTTGA
64 TTGCGGCGTTTGTTGA
* * * *
190311 AAAAACGCCGCTATAAACTATCTTTTGCGGCATTTTTGCTATAAACGCCGCTAAATTACACTCTA
1 AAAAACGCCACTATAAACAATCTATTGCGGCGTTTTT--TATAAACGCCGCTAAATTACACTCTA
*
190376 TTGCGGCGTTTGTTTA
64 TTGCGGCGTTTGTTGA
*
190392 AAAGACGCC
1 AAAAACGCC
190401 GCTAAAGTAT
Statistics
Matches: 203, Mismatches: 43, Indels: 17
0.77 0.16 0.06
Matches are distributed among these distances:
81 89 0.44
82 53 0.26
83 57 0.28
84 4 0.02
ACGTcount: A:0.32, C:0.22, G:0.15, T:0.30
Consensus pattern (79 bp):
AAAAACGCCACTATAAACAATCTATTGCGGCGTTTTTTATAAACGCCGCTAAATTACACTCTATT
GCGGCGTTTGTTGA
Found at i:192077 original size:2 final size:2
Alignment explanation
Indices: 192070--192132 Score: 126
Period size: 2 Copynumber: 31.5 Consensus size: 2
192060 TGTTCTATGT
192070 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
192112 TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA T
192133 TACATTGTTT
Statistics
Matches: 61, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 61 1.00
ACGTcount: A:0.49, C:0.00, G:0.00, T:0.51
Consensus pattern (2 bp):
TA
Found at i:192693 original size:23 final size:24
Alignment explanation
Indices: 192635--192693 Score: 66
Period size: 24 Copynumber: 2.5 Consensus size: 24
192625 TTCAGGACAT
* *
192635 TTCTATATGGTACTTTGGTGCATA
1 TTCTATATGGCACTTCGGTGCATA
***
192659 TTCTACGCGGCACTTCGGTGCA-A
1 TTCTATATGGCACTTCGGTGCATA
192682 TTCTATATGGCA
1 TTCTATATGGCA
192694 GTTTCGACTG
Statistics
Matches: 27, Mismatches: 8, Indels: 1
0.75 0.22 0.03
Matches are distributed among these distances:
23 10 0.37
24 17 0.63
ACGTcount: A:0.20, C:0.20, G:0.22, T:0.37
Consensus pattern (24 bp):
TTCTATATGGCACTTCGGTGCATA
Found at i:193799 original size:30 final size:30
Alignment explanation
Indices: 193763--193824 Score: 115
Period size: 30 Copynumber: 2.1 Consensus size: 30
193753 AAACTTTTAA
*
193763 TTTTTTTCAAAATCATACGTAACGTTTAGT
1 TTTTTTTCAAAATCATACGTAACATTTAGT
193793 TTTTTTTCAAAATCATACGTAACATTTAGT
1 TTTTTTTCAAAATCATACGTAACATTTAGT
193823 TT
1 TT
193825 GTTTCATTTT
Statistics
Matches: 31, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
30 31 1.00
ACGTcount: A:0.31, C:0.13, G:0.08, T:0.48
Consensus pattern (30 bp):
TTTTTTTCAAAATCATACGTAACATTTAGT
Done.