Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004696.1 Hibiscus syriacus cultivar Beakdansim tig00010543_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59790

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6194--6226
8
4.1
8
96
0
57
57
0
39
3
1.14
6882--6906
12
2.1
12
100
0
50
8
0
0
92
0.40
12478--12531
13
4.4
13
70
13
51
64
22
3
9
1.38
12461--12524
23
2.7
23
82
2
74
62
23
6
7
1.45
13690--13731
18
2.3
18
87
0
57
73
2
0
23
0.94
25911--25943
13
2.4
14
90
5
50
45
27
0
27
1.54
29766--29815
2
26.0
2
76
8
50
52
0
0
48
1.00
29766--29850
36
2.4
37
84
11
106
50
0
0
49
1.00
29767--29817
17
3.1
17
78
16
54
50
0
0
49
1.00
29766--29857
42
2.3
42
88
7
138
51
0
0
48
1.00
41034--41066
3
11.0
3
100
0
66
33
0
0
66
0.92
41726--42130
51
8.0
51
84
4
500
37
26
18
18
1.94
41726--42126
153
2.6
152
88
2
558
36
26
18
18
1.94
54167--54227
25
2.5
24
77
15
61
16
6
24
52
1.67
54175--54229
25
2.1
27
86
6
78
16
5
21
56
1.60
54175--54240
27
2.4
27
82
9
73
15
6
22
56
1.61
55379--55403
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!