Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004697.1 Hibiscus syriacus cultivar Beakdansim tig00010547_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78012

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4223--4249
14
1.9
14
100
0
54
59
0
3
37
1.15
10559--10622
23
2.8
23
85
2
76
59
3
0
37
1.13
18033--18115
43
1.9
43
95
0
148
38
13
15
32
1.86
21801--21840
19
2.1
19
100
0
80
37
5
10
47
1.59
31341--31385
2
23.0
2
90
4
74
48
0
2
48
1.13
32485--32585
3
33.7
3
91
0
139
36
1
0
60
1.15
32581--32621
11
3.8
10
87
9
55
56
2
0
41
1.13
34767--34804
15
2.8
13
88
11
51
23
5
2
68
1.23
46573--47027
83
5.5
83
97
0
820
26
13
22
37
1.91
47798--48323
114
4.6
114
94
1
745
38
13
19
28
1.89
48649--48746
3
32.7
3
93
0
97
41
1
1
56
1.13
48742--48782
11
3.8
10
87
9
55
56
2
0
41
1.13
56490--56526
6
6.7
6
82
17
53
45
0
0
54
1.00
56458--56527
20
4.0
16
75
15
52
45
4
0
50
1.21
64893--64931
19
2.1
19
100
0
78
38
15
5
41
1.69
66739--66769
15
2.1
15
93
0
53
54
0
0
45
0.99
71076--71178
30
3.4
30
97
0
188
31
24
20
24
1.98
71076--71203
60
2.1
61
88
1
186
32
25
19
22
1.97
75670--75802
30
4.4
30
95
0
230
31
23
19
25
1.98
75670--75827
60
2.6
60
88
3
210
32
23
18
24
1.97
76418--76509
2
46.5
2
97
2
177
51
0
0
48
1.00
77049--77091
21
2.0
21
81
0
50
18
25
27
27
1.98

Tables:   1

The End!