Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004705.1 Hibiscus syriacus cultivar Beakdansim tig00010574_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80106

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6145--6190
19
2.4
19
82
7
58
50
4
0
45
1.21
13797--13825
2
15.0
2
92
7
51
48
0
0
51
1.00
15148--15221
29
2.6
29
97
0
139
28
2
14
54
1.55
15207--15247
18
2.3
18
91
4
66
17
7
14
60
1.55
15973--16010
18
2.1
18
85
9
51
15
13
2
68
1.32
22206--24017
6
302.0
6
79
7
737
52
0
44
2
1.17
22206--24017
15
120.8
15
71
7
737
52
0
44
2
1.17
22762--22794
7
5.0
7
92
7
52
30
0
69
0
0.88
26769--26798
14
2.1
14
100
0
60
46
20
6
26
1.75
28051--28093
9
4.7
9
94
5
77
11
25
32
30
1.91
28051--28093
19
2.3
18
96
4
77
11
25
32
30
1.91
31002--31066
3
21.7
3
96
0
121
69
0
0
30
0.89
52094--52139
24
2.0
23
87
8
67
43
8
4
43
1.55
60565--60600
14
2.5
14
90
4
54
25
11
0
63
1.27
60779--60814
18
2.0
18
100
0
72
33
16
22
27
1.95
69116--69158
17
2.5
17
88
3
59
62
6
16
13
1.51
77742--77773
16
1.9
17
93
6
57
43
3
15
37
1.63

Tables:   1

The End!