Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004713.1 Hibiscus syriacus cultivar Beakdansim tig00010622_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47938

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2090--2553
36
12.5
35
82
11
473
44
3
6
45
1.46
2088--2553
74
6.2
74
89
6
606
44
3
6
45
1.46
2088--2553
147
3.1
145
88
6
616
44
3
6
45
1.46
2597--2634
10
3.7
10
86
6
58
23
0
0
76
0.79
3988--4062
12
6.5
11
74
9
60
20
2
4
73
1.12
3994--4059
23
2.9
22
75
8
60
21
3
4
71
1.18
15082--15122
3
14.0
3
84
5
57
26
0
0
73
0.84
15211--15240
11
2.8
11
95
5
53
23
50
16
10
1.75
17062--17109
2
24.0
2
100
0
96
50
0
0
50
1.00
22276--22303
11
2.5
11
100
0
56
57
0
25
17
1.41
24570--24598
2
14.5
2
100
0
58
51
0
0
48
1.00
28031--28215
91
2.0
91
96
0
343
39
15
20
24
1.91
30143--30177
17
2.1
17
100
0
70
42
11
22
22
1.85
31017--31049
16
2.0
17
88
5
50
24
0
6
69
1.10
31017--31056
20
2.0
20
85
9
55
22
0
7
70
1.12
33451--33612
82
2.0
84
81
2
193
31
14
21
32
1.94
33717--34139
41
10.3
41
79
8
376
26
17
19
36
1.94
33717--34139
84
5.1
82
77
7
392
26
17
19
36
1.94
33717--34139
125
3.4
123
78
10
427
26
17
19
36
1.94
37164--37424
43
6.1
43
85
4
341
24
22
19
33
1.97
37164--37424
85
3.1
86
81
7
343
24
22
19
33
1.97
37184--37422
128
1.9
127
85
2
336
24
22
19
34
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38018--38050
13
2.5
13
95
0
57
33
3
0
63
1.10
41186--41572
57
7.1
55
87
8
544
36
18
9
35
1.82
41425--41569
44
3.0
47
82
15
179
37
17
9
34
1.83
41374--41569
99
2.0
101
94
2
351
38
18
8
34
1.81
44751--44810
3
19.7
3
96
3
111
35
0
0
65
0.93
47296--47917
42
14.6
41
76
13
280
25
17
16
40
1.90
47365--47932
44
13.2
45
77
8
443
25
16
16
41
1.89
47364--47932
85
6.6
87
77
12
489
25
16
16
41
1.89
47364--47936
129
4.4
130
78
12
536
25
16
16
41
1.88

Tables:   1

The End!