Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004715.1 Hibiscus syriacus cultivar Beakdansim tig00010630_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45910

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
415--572
3
52.7
3
82
9
198
62
1
0
35
1.08
860--2079
224
5.5
226
93
2
2029
28
19
14
37
1.92
860--2079
113
10.9
113
92
2
1932
28
19
14
37
1.92
2637--3351
52
13.7
52
96
0
1313
36
23
15
24
1.93
4288--4333
1
46.0
1
82
0
56
0
8
0
91
0.43
15703--15738
19
1.9
19
94
5
65
72
5
0
22
1.05
16298--16326
13
2.2
13
100
0
58
6
62
31
0
1.22
17078--17220
3
47.7
3
94
0
250
65
0
0
34
0.98
27396--27437
12
3.5
12
75
12
50
23
26
26
23
2.00
30069--30120
25
2.2
25
86
6
72
42
3
0
53
1.19
30081--30167
25
3.6
23
75
21
81
37
3
1
57
1.23
30094--30154
22
2.6
24
84
7
81
39
4
1
54
1.32
35010--35049
18
2.3
17
95
4
71
30
2
0
67
1.04
35209--35254
23
2.0
23
87
4
67
52
0
2
45
1.13
40192--40250
16
3.7
16
97
0
109
11
35
6
45
1.67
40201--40243
7
5.6
7
80
20
50
11
39
4
44
1.62

Tables:   1

The End!