Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004717.1 Hibiscus syriacus cultivar Beakdansim tig00010637_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72338

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4140--4199
21
3.0
20
73
14
61
30
26
21
21
1.99
4159--4195
18
2.1
18
89
0
56
29
29
18
21
1.97
20278--20338
17
3.0
22
72
25
69
36
47
13
3
1.59
20289--20333
17
2.6
17
96
3
81
33
48
13
4
1.62
20506--20917
86
4.8
86
76
8
354
52
6
16
24
1.66
20506--20938
43
10.0
43
72
12
246
52
6
16
24
1.67
21971--22126
44
3.5
44
86
0
213
29
19
23
27
1.98
21974--22134
88
1.8
88
87
0
241
29
19
23
26
1.98
22955--23102
64
2.3
64
75
11
142
34
20
18
26
1.96
23430--23510
29
2.8
29
96
3
146
44
16
22
17
1.86
24280--24697
116
3.6
116
92
1
644
24
23
16
35
1.95
31031--31099
24
2.9
24
82
0
75
46
7
40
5
1.55
31036--31099
12
5.3
12
76
0
56
48
6
40
4
1.49
45496--45533
19
2.0
19
89
0
58
31
26
13
28
1.93
49040--49086
22
2.1
23
88
4
69
53
0
2
44
1.12
49048--49091
22
2.0
22
82
8
54
54
0
2
43
1.12
49479--49568
2
45.5
2
97
2
173
50
0
0
50
1.00
60365--60389
13
1.9
13
100
0
50
48
8
20
24
1.76
67705--67743
19
2.1
19
95
0
69
20
38
15
25
1.92
67660--67869
64
3.3
65
80
9
209
30
26
16
27
1.97
67821--67869
19
2.6
19
84
9
57
24
30
18
26
1.98

Tables:   1

The End!