Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004718.1 Hibiscus syriacus cultivar Beakdansim tig00010638_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46970

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2770--2832
24
2.7
23
92
5
99
41
19
20
19
1.91
2760--2845
24
3.7
23
81
6
82
41
20
18
18
1.90
2841--2925
23
3.7
22
75
9
64
37
23
20
18
1.94
2850--2925
23
3.3
24
80
5
77
38
25
19
17
1.93
3064--3146
15
5.4
15
70
5
58
32
19
12
36
1.88
6821--6861
21
2.0
21
90
0
64
26
26
21
24
2.00
9208--9241
16
2.1
17
88
5
52
32
2
5
58
1.37
9470--9516
2
24.0
2
95
4
87
51
0
0
48
1.00
10468--10494
14
1.9
14
100
0
54
37
7
33
22
1.82
17728--17801
21
3.1
23
78
18
71
47
1
0
51
1.09
17902--17946
23
2.0
23
90
0
72
44
0
2
53
1.13
17903--17953
23
2.2
23
85
0
66
47
0
1
50
1.12
17936--17972
19
2.0
19
85
15
51
48
0
0
51
1.00
17902--17972
32
2.2
31
82
14
81
47
0
1
50
1.09
17902--17973
34
2.1
33
80
14
76
48
0
1
50
1.09
17964--18049
27
3.2
26
70
15
68
46
3
2
47
1.32
18122--18178
22
2.6
22
78
10
55
52
0
3
43
1.18
18125--18195
23
3.1
23
82
8
65
49
0
2
47
1.16
20154--20192
19
2.0
21
90
10
64
30
5
12
51
1.62
20646--20687
13
3.4
13
80
9
52
35
0
4
59
1.19
23346--23375
14
2.1
15
93
6
53
40
0
0
60
0.97
23712--23778
31
2.1
31
83
8
82
49
11
2
35
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32843--32890
25
1.9
25
87
8
71
60
0
4
35
1.16
35039--35102
30
2.1
30
94
0
110
39
28
9
23
1.86
37915--38042
49
2.6
49
83
1
159
40
12
14
32
1.83
40925--40953
2
15.0
2
92
7
51
48
0
0
51
1.00

Tables:   1

The End!