Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000472.1 Hibiscus syriacus cultivar Beakdansim tig00000879_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67540

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2049--2102
27
2.0
28
88
3
83
46
5
0
48
1.25
4595--4698
39
2.7
39
86
4
140
17
26
22
33
1.96
10076--10197
21
5.7
21
72
12
79
27
13
18
40
1.88
10116--10205
21
4.2
21
78
5
90
26
14
23
35
1.93
16242--16288
19
2.5
19
96
0
85
42
21
8
27
1.81
16894--17037
21
6.8
21
74
7
103
25
17
23
34
1.96
19970--20033
18
3.6
18
78
2
67
23
25
21
29
1.99
24091--24310
34
6.6
34
83
6
247
15
20
16
48
1.82
24091--24241
68
2.2
68
96
0
275
13
17
16
51
1.76
24227--24303
32
2.5
31
82
4
93
14
24
16
44
1.85
30582--30616
2
17.5
2
100
0
70
48
0
0
51
1.00
32394--32429
14
2.6
14
100
0
72
19
27
8
44
1.79
41456--41519
21
3.0
21
81
4
83
23
23
23
29
1.99
42020--42054
11
3.2
11
95
0
61
28
14
28
28
1.95
42046--42091
22
2.1
22
95
0
83
19
23
32
23
1.97
42475--42523
24
2.0
24
84
7
64
36
2
16
44
1.59
47674--47733
23
2.7
22
89
5
95
23
33
23
20
1.97
49728--49761
17
2.0
17
88
0
50
14
2
29
52
1.56
63830--63858
10
3.0
10
95
5
51
20
0
0
79
0.74
63839--63873
16
2.2
16
89
0
52
28
0
0
71
0.86

Tables:   1

The End!