Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004720.1 Hibiscus syriacus cultivar Beakdansim tig00010646_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79203

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5567--5607
15
2.9
14
89
10
57
65
26
0
7
1.18
20616--20657
22
1.9
22
100
0
84
45
14
7
33
1.72
24104--24143
17
2.4
17
91
0
62
0
10
2
87
0.63
29258--29449
80
2.4
80
83
0
240
27
21
13
36
1.91
29385--29470
40
2.2
40
86
0
118
29
23
10
37
1.88
29315--29542
119
1.9
120
83
2
298
28
19
13
39
1.89
36055--36094
14
2.8
14
88
3
62
30
17
32
20
1.95
40140--40194
7
7.9
7
100
0
110
14
0
41
43
1.45
50261--50313
24
2.2
25
82
3
63
28
7
0
64
1.21
51581--51605
12
2.1
12
100
0
50
24
0
0
76
0.80
54643--54800
55
2.9
54
84
6
196
24
24
20
31
1.98
54794--55189
111
3.6
110
86
3
546
28
27
13
30
1.94
54707--55188
55
8.8
55
84
5
539
26
26
15
30
1.96
54786--55189
166
2.4
165
87
3
551
28
26
14
30
1.95
56191--56242
8
6.5
8
91
6
70
11
7
0
80
0.89
56199--56242
15
2.8
16
86
6
72
13
4
0
81
0.83
76380--76563
79
2.3
79
97
0
341
35
17
17
28
1.94
76499--76627
64
2.0
64
100
0
258
37
15
20
26
1.92
76420--76706
143
2.0
143
97
0
547
36
16
19
26
1.93
76563--76760
79
2.5
79
96
0
378
37
16
19
26
1.93

Tables:   1

The End!