Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004723.1 Hibiscus syriacus cultivar Beakdansim tig00010649_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70501

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14037--14244
64
3.2
64
82
5
217
33
21
18
26
1.96
14759--14843
16
5.4
16
63
20
54
40
11
15
32
1.83
14755--15009
31
8.2
31
92
1
420
39
10
14
34
1.81
14755--14999
126
1.9
126
94
0
427
39
11
14
35
1.81
18062--18235
64
2.7
64
83
7
203
33
20
20
25
1.97
18800--18883
16
5.4
16
64
25
54
39
13
15
32
1.86
18796--18986
31
6.2
31
96
0
355
38
11
15
34
1.84
23057--23086
15
2.0
15
93
0
51
43
6
10
40
1.64
23771--23821
15
3.4
15
86
0
75
37
7
17
37
1.79
23761--23837
30
2.6
29
89
4
118
41
9
15
33
1.79
23992--24073
21
3.8
22
72
15
64
45
1
0
53
1.08
24168--24218
23
2.2
23
82
0
57
45
1
1
50
1.24
24206--24380
59
3.0
61
69
22
149
48
1
1
48
1.22
24347--24393
22
2.1
23
92
4
78
55
0
0
44
0.99
24348--24425
23
3.3
24
84
7
90
52
0
0
47
1.00
24354--24410
22
2.6
22
81
10
64
54
0
0
45
0.99
24633--24712
42
1.9
42
87
5
117
53
16
10
20
1.70
24903--24946
19
2.3
19
84
7
54
45
0
2
52
1.13
24907--24968
30
2.2
27
83
13
72
46
1
3
48
1.28
25227--25268
21
2.0
21
85
0
57
38
11
4
45
1.62
38155--38410
2
127.0
2
69
17
138
46
5
2
45
1.39
38394--38495
31
3.5
31
75
16
101
43
3
4
48
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38534--38615
22
3.8
22
80
9
80
43
3
7
45
1.49
38526--38607
42
2.0
42
87
0
119
42
3
8
45
1.52
41864--41914
15
3.4
15
73
10
50
35
1
3
58
1.28
41861--41918
30
1.9
31
92
3
100
31
1
3
63
1.21
42536--42575
14
2.9
14
84
0
53
55
5
7
32
1.50
48417--48545
42
3.1
42
93
2
224
41
6
2
50
1.40
48432--48564
42
3.2
42
90
4
153
40
7
2
49
1.43
48791--48872
37
2.2
38
84
4
105
34
43
9
12
1.75
48791--48892
37
2.7
38
77
8
102
36
37
9
16
1.82
55447--55485
20
2.0
20
84
0
51
51
5
0
43
1.24
61576--61620
23
2.0
23
100
0
90
42
26
22
8
1.83
62692--62768
31
2.5
31
84
2
91
38
10
10
40
1.74
67044--67103
31
2.0
30
96
3
111
30
15
15
40
1.87

Tables:   1

The End!