Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004725.1 Hibiscus syriacus cultivar Beakdansim tig00010656_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80101

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3862--4135
139
2.0
139
91
3
453
37
17
16
28
1.92
6458--6510
24
2.2
25
82
3
63
28
7
0
64
1.21
7770--7794
12
2.1
12
100
0
50
24
0
0
76
0.80
14360--14755
79
5.0
79
95
1
731
35
17
18
28
1.94
17514--17591
29
2.7
29
89
2
111
43
15
6
34
1.72
21430--21482
26
2.0
26
92
0
88
39
22
28
9
1.85
21461--21567
32
3.2
32
76
17
119
38
16
17
27
1.92
26274--26305
11
2.8
12
86
13
50
62
6
31
0
1.20
26426--26451
2
13.0
2
100
0
52
50
0
0
50
1.00
27728--27782
21
2.6
21
97
0
101
36
16
16
30
1.91
35450--35486
2
18.5
2
100
0
74
51
0
0
48
1.00
37025--37091
35
2.0
33
85
5
89
31
17
14
35
1.91
37897--37951
12
4.6
12
83
0
74
12
16
47
23
1.81
37949--38040
2
49.0
2
69
12
52
47
0
0
52
1.00
38062--38098
13
2.8
13
95
0
65
13
16
51
18
1.76
42411--42523
12
9.4
11
71
17
66
38
0
0
60
1.03
42425--42519
24
3.8
27
76
15
89
43
0
1
55
1.06
42420--42577
64
2.5
64
92
4
259
41
0
1
56
1.07
42472--42560
38
2.3
37
81
12
101
43
0
1
55
1.07
42572--42633
19
3.3
19
78
15
58
37
1
0
61
1.06
43047--43107
31
2.0
31
86
0
86
47
6
4
40
1.51
53910--54076
90
1.9
90
91
3
275
32
10
15
40
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71944--71983
19
2.2
19
86
4
55
15
2
7
75
1.14
75169--75215
24
2.0
24
95
0
85
23
12
27
36
1.91
76737--76814
20
3.9
20
87
0
111
35
8
32
23
1.86
77492--77560
35
2.0
35
97
0
129
47
8
14
28
1.74
77955--77984
12
2.4
13
88
11
53
70
0
0
30
0.88

Tables:   1

The End!