Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004730.1 Hibiscus syriacus cultivar Beakdansim tig00010670_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78763

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4144--4187
18
2.4
18
92
0
70
6
27
31
34
1.83
14455--14489
17
2.1
17
89
5
54
54
0
14
31
1.40
23719--23790
17
4.2
17
67
3
54
43
6
12
37
1.70
30039--30073
17
2.1
17
89
5
54
54
0
14
31
1.40
32559--32589
16
1.9
16
93
0
53
3
19
0
77
0.90
39862--39886
12
2.1
12
100
0
50
44
0
32
24
1.54
62151--62226
3
25.7
3
97
2
145
31
0
0
68
0.90
63479--63507
2
14.5
2
100
0
58
48
0
0
51
1.00
63653--63704
26
2.0
26
100
0
104
26
23
3
46
1.69
69452--69506
18
3.5
15
76
20
51
43
1
0
54
1.10
69472--69524
23
2.3
23
74
6
54
52
1
1
43
1.23
70761--70809
3
16.7
3
82
4
55
65
2
0
32
1.04
70749--70809
27
2.3
27
82
5
70
62
1
0
36
1.05
73665--73698
10
3.3
10
95
4
59
0
11
0
88
0.52
73665--73698
11
3.2
11
91
4
52
0
11
0
88
0.52

Tables:   1

The End!