Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004734.1 Hibiscus syriacus cultivar Beakdansim tig00010689_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57928

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
290--333
21
2.1
21
82
0
52
31
15
43
9
1.79
9746--9834
21
4.2
21
95
0
151
40
8
3
47
1.52
12625--12689
21
3.1
21
95
0
112
36
6
1
55
1.34
14015--14544
264
2.0
264
100
0
1060
29
14
13
41
1.85
15869--15998
51
2.5
51
89
0
188
16
32
32
18
1.94
16114--16191
23
3.4
23
90
0
129
19
42
7
30
1.79
20285--20410
47
2.8
46
82
11
147
32
19
7
40
1.79
23367--23430
30
2.1
30
94
0
110
18
1
42
37
1.60
24170--24258
34
2.7
32
77
10
90
39
0
2
58
1.11
25979--26026
21
2.3
21
85
0
60
25
39
12
22
1.89
26030--26123
21
4.5
21
92
5
129
18
35
26
20
1.95
26646--26742
33
2.9
34
85
3
133
55
4
3
37
1.35
26644--26749
34
3.2
33
82
8
133
54
4
2
37
1.36
27130--27356
126
1.8
126
100
0
454
32
20
25
21
1.98
27424--27464
8
5.2
8
82
5
57
36
29
0
34
1.58
29095--29152
23
2.6
23
94
5
102
44
12
3
39
1.58
31104--31172
22
3.2
22
74
11
63
40
30
0
28
1.57
32370--32458
30
3.0
29
73
12
83
25
17
4
51
1.64
32737--33146
138
2.9
136
78
10
445
29
10
13
46
1.77
37791--37845
29
1.9
28
85
10
76
27
21
5
45
1.74
38130--38537
137
2.9
136
77
11
434
28
12
14
44
1.80
38129--38511
140
2.7
140
80
7
449
28
12
14
44
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43833--43885
21
2.5
21
100
0
106
28
18
0
52
1.46
44300--44338
20
2.0
20
85
10
53
33
12
30
23
1.92
46879--47065
81
2.3
81
82
8
213
22
16
20
40
1.91
46938--47069
40
3.3
41
67
14
112
20
15
23
40
1.90
46937--47089
81
1.9
81
87
5
229
20
14
22
41
1.89
46948--47116
81
2.1
82
82
4
207
22
16
19
41
1.90
47823--47866
19
2.3
20
80
11
56
59
0
2
38
1.10
50888--51192
130
2.4
130
88
1
452
40
14
12
32
1.84
52693--52726
17
2.0
17
88
0
50
35
5
8
50
1.58
57134--57199
19
3.5
19
77
4
62
40
21
19
18
1.91

Tables:   1

The End!