Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004738.1 Hibiscus syriacus cultivar Beakdansim tig00010698_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62702

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2084--2129
23
2.0
23
83
8
58
36
6
8
47
1.60
3373--3416
12
3.6
12
81
6
52
40
34
2
22
1.67
7191--7313
31
4.0
31
95
0
219
36
34
6
22
1.80
14238--14300
31
2.0
31
100
0
126
36
38
3
22
1.70
15427--15477
22
2.3
22
83
6
59
23
0
5
70
1.09
17211--17257
22
2.2
21
81
11
51
23
8
4
63
1.40
17774--17811
19
2.0
19
100
0
76
42
26
21
10
1.85
22190--22234
12
4.0
11
80
13
56
84
0
13
2
0.72
22197--22239
10
4.4
10
94
2
70
86
0
13
0
0.58
23263--24115
59
14.4
59
88
1
1177
29
28
15
26
1.96
24302--24360
22
2.6
22
78
10
66
52
30
0
16
1.44
25926--25967
7
5.6
7
88
8
57
16
0
2
80
0.81
25928--25980
23
2.3
22
81
15
63
20
0
3
75
0.96
25926--25981
7
7.0
8
86
11
55
21
0
3
75
0.96
29240--29273
18
1.9
18
88
5
52
32
0
2
64
1.08
38188--38221
15
2.3
15
90
10
52
41
2
0
55
1.15
39687--39724
16
2.3
17
90
4
60
26
18
21
34
1.96
39883--39939
20
2.8
20
97
0
105
26
15
42
15
1.87
40462--40495
17
2.1
16
94
5
59
44
2
0
52
1.16
42779--42831
21
2.5
21
100
0
106
28
26
9
35
1.87
51705--51729
2
12.5
2
100
0
50
0
52
0
48
1.00
55048--55091
14
2.9
15
86
6
63
47
13
20
18
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59162--59197
13
2.7
13
95
4
63
75
0
5
19
1.00
60260--60327
20
3.4
20
93
0
91
25
27
22
25
1.99
61358--61393
13
2.7
13
86
4
54
47
22
22
8
1.77

Tables:   1

The End!