Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004741.1 Hibiscus syriacus cultivar Beakdansim tig00010701_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38815

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2191--2218
2
14.0
2
100
0
56
50
0
0
50
1.00
2235--2292
22
2.6
23
81
8
75
46
0
0
53
1.00
2248--2292
11
4.0
11
94
2
72
40
0
0
60
0.97
5928--5957
7
4.3
7
100
0
60
0
26
0
73
0.84
6743--6818
24
3.0
24
76
14
73
32
1
2
63
1.17
6743--6808
17
4.0
16
71
19
55
31
1
3
63
1.19
10649--10702
3
18.3
3
96
3
101
33
0
0
66
0.92
17133--17250
36
3.6
35
73
22
121
22
22
16
37
1.94
17835--17923
30
2.9
30
90
5
135
34
13
8
42
1.76
22607--22688
29
2.8
29
94
1
137
32
14
9
42
1.79
27799--27880
29
2.8
29
94
1
137
32
14
9
42
1.79
32554--32665
29
3.8
29
95
1
197
32
14
9
43
1.78

Tables:   1

The End!