Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004760.1 Hibiscus syriacus cultivar Beakdansim tig00010739_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83102

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3489--3587
30
3.4
30
78
6
98
27
23
16
33
1.95
3994--4019
5
5.2
5
100
0
52
0
19
0
80
0.71
6873--6931
31
1.9
31
85
0
82
23
15
5
55
1.59
9982--10012
14
2.3
14
94
5
55
41
0
9
48
1.36
11004--11086
24
3.5
24
89
0
130
6
12
21
60
1.53
10996--11083
14
6.9
14
74
20
86
4
11
23
60
1.49
11061--11090
14
2.1
14
93
0
51
13
6
16
63
1.50
13273--13316
17
2.6
18
82
17
58
43
0
4
52
1.22
14714--14785
30
2.4
29
77
9
72
41
18
8
31
1.80
15095--15166
31
2.3
31
78
4
74
33
9
15
41
1.80
17904--17986
35
2.4
35
91
0
139
49
7
7
36
1.58
19309--19349
17
2.3
18
91
4
66
41
2
0
56
1.13
19583--19641
24
2.4
25
80
2
66
57
5
3
33
1.37
19864--19983
11
11.4
10
70
14
64
50
2
5
41
1.40
19864--19981
31
3.8
30
77
12
112
50
2
5
41
1.40
24445--24727
120
2.3
120
83
7
356
30
16
15
37
1.90
32405--32644
81
3.0
80
81
13
271
49
9
20
20
1.76
34031--34364
4
83.5
4
93
0
551
26
2
23
47
1.64
34976--35029
22
2.5
22
96
0
99
31
33
11
24
1.90
35797--35838
14
3.0
14
73
13
50
50
2
2
45
1.27
39219--39551
159
2.1
158
98
0
639
22
16
16
45
1.85
43792--43827
2
18.0
2
100
0
72
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47421--47455
13
2.5
15
86
13
56
42
0
0
57
0.99
48325--48357
15
2.2
15
89
10
50
81
0
3
15
0.80
48970--49013
22
2.0
21
83
12
54
25
0
2
72
0.96
53560--53593
17
2.0
17
94
0
59
35
0
2
61
1.11
60226--60289
32
2.0
33
90
3
103
46
26
1
25
1.61
65972--66033
21
3.0
21
83
4
81
19
24
19
37
1.94
65974--66034
20
3.0
21
82
4
79
21
24
19
34
1.96
66336--66378
20
2.2
20
86
0
59
13
9
37
39
1.78
67723--67763
20
2.0
20
90
0
64
46
0
2
51
1.14
67987--68024
20
1.9
20
94
0
67
52
2
0
44
1.14
68447--68479
9
3.5
10
88
12
52
30
0
0
69
0.88
68447--68482
16
2.2
16
90
9
56
30
0
0
69
0.89
76104--76162
3
19.7
3
82
6
75
5
30
1
62
1.26
76644--76708
6
11.3
6
87
9
100
49
0
49
1
1.10
76616--76708
33
2.8
33
85
6
118
50
0
46
3
1.17
77856--77895
21
1.9
21
85
10
55
15
10
37
37
1.80

Tables:   1

The End!