Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004762.1 Hibiscus syriacus cultivar Beakdansim tig00010741_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47689

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
684--757
16
4.9
15
73
22
59
51
1
1
45
1.18
2770--2816
25
2.0
23
83
8
58
46
4
2
46
1.34
5493--5575
31
2.7
31
76
14
91
40
3
15
39
1.65
7708--7745
14
2.7
14
95
0
67
2
34
18
44
1.64
7790--7821
15
2.2
14
94
5
55
18
21
0
59
1.38
9944--9969
13
2.0
13
100
0
52
38
7
0
53
1.30
19838--19878
14
2.8
15
88
3
57
24
14
0
60
1.34
20157--20193
18
2.1
18
94
0
65
29
0
0
70
0.88
22260--22314
26
2.0
27
89
6
85
23
14
5
56
1.59
22276--22329
14
3.8
14
80
2
54
22
16
7
53
1.67
24541--24592
2
26.0
2
100
0
104
50
0
0
50
1.00
27570--27614
21
2.1
21
87
0
63
31
28
24
15
1.96
29310--29376
22
3.0
22
95
2
116
19
26
28
25
1.99
32448--32492
21
2.1
21
87
0
63
31
28
24
15
1.96
34186--34252
22
3.0
22
95
2
116
19
26
28
25
1.99
35203--35431
115
2.0
115
92
1
345
33
14
21
30
1.94
37732--37810
22
3.6
22
81
11
90
31
15
12
40
1.84
38212--38665
114
4.0
114
90
2
718
37
16
19
27
1.93
40258--40298
18
2.3
18
87
8
57
26
2
0
70
0.99
40550--40586
18
2.1
18
94
0
65
29
0
0
70
0.88
46296--46333
20
1.9
20
94
0
67
15
28
39
15
1.89
46322--46359
16
2.4
16
100
0
76
21
34
18
26
1.96

Tables:   1

The End!