Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004764.1 Hibiscus syriacus cultivar Beakdansim tig00010746_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  102610

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
364--421
7
8.9
7
90
9
88
31
44
24
0
1.54
364--421
13
4.4
14
91
8
88
31
44
24
0
1.54
2026--2068
2
22.0
2
95
4
79
48
0
0
51
1.00
2027--2071
21
2.1
21
100
0
90
46
0
0
53
1.00
17577--17642
33
2.0
33
96
0
123
50
9
13
27
1.72
24056--24088
17
2.0
17
88
5
50
39
6
0
54
1.25
24619--24686
31
2.2
31
81
5
84
29
2
7
60
1.39
30374--30468
50
1.9
50
100
0
190
24
18
12
44
1.85
32483--32672
60
3.2
59
76
7
170
41
5
24
29
1.77
34719--34778
29
2.1
29
87
6
88
53
6
10
30
1.60
35247--35298
2
26.0
2
100
0
104
50
0
0
50
1.00
38523--38598
36
2.1
36
97
0
143
31
10
14
43
1.79
39021--39050
15
2.0
15
100
0
60
13
26
46
13
1.80
43532--43607
36
2.1
36
97
0
143
31
10
14
43
1.79
50026--50070
21
2.2
21
96
4
83
22
4
37
35
1.74
52214--52247
12
2.9
12
95
4
61
8
8
50
32
1.64
52265--52327
24
2.6
25
78
16
71
44
0
0
55
0.99
53218--53251
11
2.9
12
86
8
52
32
0
0
67
0.91
53224--53252
11
2.6
11
100
0
58
31
0
0
68
0.89
66179--66280
46
2.2
46
96
1
188
32
15
17
34
1.92
68547--68598
23
2.3
23
86
0
68
48
1
0
50
1.12
68556--68633
11
7.0
11
70
16
54
48
0
1
50
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68736--68779
22
2.0
22
90
0
70
54
0
2
43
1.12
68719--68788
32
2.2
34
82
10
85
52
0
2
44
1.15
70112--70145
10
3.4
10
84
15
52
64
17
17
0
1.29
72086--72163
32
2.4
32
84
0
93
44
10
24
20
1.82
78159--78324
87
1.9
87
89
0
260
35
12
14
37
1.83
79633--79679
2
23.5
2
100
0
94
48
0
0
51
1.00
85910--85985
30
2.6
29
85
2
107
43
23
3
28
1.72
88331--88389
24
2.5
24
94
0
100
30
33
6
28
1.83
89278--89354
35
2.2
36
81
6
86
37
3
2
55
1.32
94586--94649
31
2.1
31
100
0
128
31
29
6
32
1.82
99443--99517
22
3.6
22
82
8
95
29
30
22
17
1.97
100849--101008
64
2.5
64
80
7
180
28
19
19
33
1.96

Tables:   1

The End!