Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004765.1 Hibiscus syriacus cultivar Beakdansim tig00010748_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45622

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6727--6777
9
5.7
9
77
9
50
66
1
1
29
1.13
7212--7261
2
26.0
2
92
8
86
50
0
0
50
1.00
8472--8498
11
2.5
11
100
0
54
0
7
0
92
0.38
11486--11517
12
2.7
12
100
0
64
34
18
6
40
1.76
11605--11644
14
2.7
14
84
7
53
32
2
0
65
1.06
11703--11825
31
3.8
32
75
16
103
25
4
1
69
1.15
11783--11827
16
2.9
16
87
9
58
20
6
0
73
1.05
11768--11827
15
3.9
15
76
20
61
23
5
0
71
1.05
11926--11972
17
2.7
18
75
15
53
17
8
0
74
1.05
15129--15158
11
2.7
11
94
0
51
80
3
16
0
0.85
15257--15394
69
2.0
69
92
0
231
37
21
13
26
1.91
16930--17155
36
6.4
36
76
10
207
27
19
11
41
1.85
16843--17121
101
2.8
101
83
3
301
29
18
11
40
1.85
16950--17209
138
1.9
138
85
0
358
27
19
11
41
1.85
17104--17285
67
2.7
67
83
6
203
31
20
8
39
1.83
18003--18261
110
2.4
107
82
6
283
32
23
19
23
1.97
19634--19673
14
2.7
14
84
7
53
32
2
0
65
1.06
19715--19856
33
4.1
36
75
14
129
24
4
1
69
1.17
19786--19856
17
4.1
17
72
19
58
22
2
0
74
0.94
19769--19927
87
1.9
83
83
11
207
22
5
1
70
1.17
20047--20099
19
2.9
17
81
13
52
20
3
5
69
1.25
23465--23520
3
18.7
3
100
0
112
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23622--23695
21
3.6
20
75
12
60
47
27
2
22
1.65
29219--29249
15
2.1
15
93
0
53
19
29
32
19
1.96
29908--29937
15
2.1
15
93
6
53
26
3
0
70
1.03
36643--36714
31
2.3
31
82
0
90
13
20
16
48
1.80
37724--37811
44
2.0
42
86
4
122
37
19
10
32
1.85
44583--44607
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!