Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004766.1 Hibiscus syriacus cultivar Beakdansim tig00010749_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56272

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8867--8929
27
2.4
27
82
15
78
77
1
14
6
1.03
10032--10832
48
17.4
48
80
8
945
27
22
18
30
1.97
9974--10832
89
9.4
89
89
5
1270
27
22
18
31
1.97
9974--10832
185
4.7
185
91
4
1252
27
22
18
31
1.97
9974--10832
274
3.1
274
94
2
1446
27
22
18
31
1.97
9978--10875
48
19.6
47
76
10
704
27
22
18
31
1.97
11111--11151
3
13.7
3
85
10
57
34
0
2
63
1.08
11111--11160
12
4.2
12
82
14
50
34
2
2
62
1.18
11572--11891
105
3.0
105
98
0
622
37
15
27
19
1.91
14849--14883
2
17.5
2
100
0
70
51
0
0
48
1.00
17090--17124
2
17.5
2
100
0
70
48
0
0
51
1.00
25038--25068
14
2.2
14
94
0
53
45
16
3
35
1.63
26328--26439
25
4.2
28
71
10
85
50
1
1
45
1.22
26348--26439
11
8.3
11
72
15
64
52
1
1
45
1.15
26344--26427
20
4.6
20
67
19
56
51
1
1
46
1.16
26762--26852
41
2.2
41
94
0
155
29
16
19
34
1.94
27042--27105
12
5.3
12
75
19
62
54
0
3
42
1.16
27046--27116
2
38.0
2
73
18
55
49
0
2
47
1.16
27055--27147
25
4.0
24
74
16
63
47
0
2
50
1.13
27814--27854
17
2.3
18
87
4
57
48
9
24
17
1.76
29829--29877
24
2.0
24
100
0
98
32
8
36
22
1.84
33427--33622
92
2.1
92
89
0
293
26
11
12
49
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33519--33802
112
2.5
112
88
0
433
26
11
13
48
1.76
33367--33734
204
1.8
204
88
2
569
27
13
13
46
1.80
33893--34149
74
3.5
74
87
3
367
34
13
13
38
1.84
35730--35776
16
2.9
16
93
0
85
38
4
25
31
1.75
36349--36379
6
5.2
6
100
0
62
35
48
16
0
1.46
36867--36923
5
10.6
5
92
1
60
0
19
50
29
1.47
36875--36927
6
9.5
6
93
6
78
0
16
52
30
1.44
37040--37132
20
4.6
20
82
2
123
39
22
22
15
1.91
37080--37153
21
3.6
21
74
3
87
33
25
18
21
1.96
37060--37222
41
3.8
41
80
13
202
34
22
22
20
1.97
37450--37517
28
2.4
28
87
0
100
45
32
10
11
1.74
41844--41888
5
9.2
5
80
4
56
73
4
0
22
1.01
42548--42582
3
11.3
3
93
6
61
31
0
0
68
0.90
50698--50736
14
2.7
15
84
8
53
12
12
58
15
1.62

Tables:   1

The End!