Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004768.1 Hibiscus syriacus cultivar Beakdansim tig00010751_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84118

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2092--2136
23
1.9
24
82
13
58
37
4
6
51
1.49
11448--11493
23
1.9
25
83
16
62
39
4
6
50
1.48
12039--12067
13
2.3
13
94
5
51
68
0
0
31
0.89
23519--23623
3
35.3
3
96
1
194
34
0
0
64
1.00
25491--25530
2
20.0
2
94
0
71
47
0
2
50
1.14
32641--32676
15
2.4
15
100
0
72
16
19
27
36
1.93
33453--33496
21
2.1
21
91
0
70
38
11
0
50
1.39
33522--33568
21
2.2
21
85
7
60
65
10
8
14
1.45
35646--35695
25
2.0
25
96
0
91
32
14
20
34
1.92
42734--42828
31
3.1
31
76
3
102
34
21
16
27
1.95
42962--42997
17
2.0
19
89
10
58
38
11
5
44
1.63
46844--46968
31
4.1
31
80
5
103
35
23
16
24
1.95
47102--47137
17
2.0
19
89
10
58
38
11
5
44
1.63
47717--47877
64
2.5
63
85
8
200
26
21
18
33
1.96
48420--48448
10
2.9
10
100
0
58
31
10
27
31
1.90
56072--56107
12
3.0
12
87
0
54
5
22
36
36
1.78
57787--58140
191
1.9
189
90
1
573
38
12
20
28
1.89
61955--62000
20
2.3
20
85
7
58
30
2
0
67
1.03
64664--64748
43
2.0
43
88
0
125
20
14
18
47
1.83
68308--68346
19
2.1
19
100
0
78
20
25
28
25
1.99
68310--68354
19
2.4
19
92
0
72
22
26
24
26
2.00
76378--76449
30
2.4
31
85
2
92
40
9
8
41
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76378--76464
31
2.8
31
84
1
104
39
10
9
41
1.71
78582--78639
28
2.1
28
80
6
64
32
0
24
43
1.55
81561--81623
30
2.1
30
100
0
126
15
22
23
38
1.93

Tables:   1

The End!