Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004770.1 Hibiscus syriacus cultivar Beakdansim tig00010753_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65776

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1069--1118
2
25.0
2
100
0
100
50
0
0
50
1.00
2368--2408
14
2.9
14
81
0
55
34
9
21
34
1.87
13662--13699
19
2.1
19
90
5
60
44
13
0
42
1.43
13883--14038
76
2.1
75
86
7
199
36
18
8
35
1.82
15048--15441
188
2.1
186
92
2
657
42
3
8
45
1.51
15448--15480
9
3.7
9
100
0
66
24
9
18
48
1.76
22589--22717
60
2.2
59
81
6
161
32
7
25
34
1.85
23494--23688
107
1.8
106
87
2
293
29
12
21
35
1.91
32403--32583
94
1.9
95
94
1
319
42
6
2
48
1.44
32487--32540
24
2.3
23
81
12
56
50
3
0
46
1.19
32618--32660
22
2.0
22
95
0
77
51
6
6
34
1.56
34748--34853
39
2.7
39
85
2
124
39
15
1
43
1.57
41152--41176
6
4.2
6
100
0
50
84
0
0
16
0.63
52399--52423
2
12.5
2
100
0
50
48
0
0
52
1.00
60423--60456
14
2.4
14
85
14
52
29
5
11
52
1.61

Tables:   1

The End!