Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004773.1 Hibiscus syriacus cultivar Beakdansim tig00010766_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68706

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7788--7824
2
18.5
2
100
0
74
51
0
0
48
1.00
20658--20702
21
2.1
21
87
0
63
31
28
24
15
1.96
22368--22434
22
3.0
22
95
2
116
19
26
28
25
1.99
26505--26539
15
2.3
15
85
0
52
51
2
2
42
1.31
29999--30133
45
3.0
45
92
0
216
31
20
18
30
1.96
34679--34824
48
3.0
48
83
0
184
14
21
26
37
1.92
46395--46442
20
2.5
19
80
12
53
14
2
31
52
1.54
52022--52046
13
1.9
13
100
0
50
32
8
12
48
1.69
52492--52529
19
2.0
19
89
0
58
47
5
0
47
1.24
59211--59269
23
2.3
26
86
11
79
59
5
1
33
1.29
59207--59267
25
2.3
28
83
11
83
57
4
1
36
1.30
60965--61008
22
2.0
22
86
0
61
27
29
25
18
1.98
60987--61285
144
2.0
144
92
4
492
34
20
18
27
1.95
63736--63778
16
2.6
17
81
3
52
37
23
0
39
1.55
65919--65963
23
2.0
23
81
0
54
26
26
24
22
2.00
65943--66229
144
2.0
145
92
4
483
34
19
17
28
1.94
66927--66983
21
2.6
22
75
8
55
42
7
0
50
1.29
67800--67840
20
2.0
20
85
0
55
17
26
29
26
1.97

Tables:   1

The End!