Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004775.1 Hibiscus syriacus cultivar Beakdansim tig00010770_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75573

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4984--5062
23
3.5
23
74
11
74
24
24
24
27
2.00
7635--7672
20
1.9
20
88
0
58
31
31
15
21
1.94
8751--8833
41
2.0
41
83
4
105
28
25
25
20
1.99
8854--8995
21
6.8
20
83
10
142
27
18
33
21
1.96
8855--8995
64
2.2
63
83
3
167
27
18
32
21
1.96
9075--9165
31
3.0
31
96
3
168
42
17
6
32
1.75
10402--10449
20
2.5
19
86
6
69
27
12
4
56
1.54
11310--11379
34
2.1
32
86
5
95
22
30
15
31
1.95
11743--11837
21
4.6
21
85
2
104
28
24
26
21
1.99
11761--11837
21
3.7
21
89
1
111
27
24
25
22
2.00
11858--11935
21
3.7
23
80
16
80
20
19
35
24
1.95
12015--12072
30
2.0
29
90
10
91
44
17
5
32
1.70
12015--12074
29
2.0
30
93
6
104
43
16
6
33
1.74
12309--12557
89
2.8
89
84
3
331
31
19
16
32
1.94
12544--12700
55
2.8
55
77
4
172
30
22
17
29
1.97
12694--12863
82
2.1
81
80
5
182
40
19
15
24
1.91
12826--12973
55
2.7
55
85
3
190
33
21
18
25
1.96
12943--13119
81
2.2
82
87
3
259
36
22
19
22
1.95
12541--13119
273
2.1
273
84
3
754
34
21
17
25
1.95
14392--14435
16
2.5
17
79
17
54
25
2
6
65
1.28
21965--22004
15
2.6
16
88
8
64
20
12
0
67
1.22
27825--27850
13
2.0
13
100
0
52
61
0
0
38
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34607--34731
63
2.0
63
100
0
250
54
12
4
28
1.58
43051--43102
21
2.5
21
100
0
104
26
19
28
25
1.98
45552--45593
22
1.9
22
90
0
66
54
7
2
35
1.41
45969--46048
23
3.6
22
77
6
90
26
22
23
27
2.00
55235--55441
110
1.9
110
86
2
299
37
20
18
23
1.94
56913--56986
16
4.7
15
75
14
60
35
2
1
60
1.19
56989--57041
14
3.6
14
77
12
54
15
7
3
73
1.20
56972--57052
27
2.9
27
79
18
78
18
7
2
71
1.21
56988--57052
30
2.2
31
81
13
84
16
7
3
72
1.21
60097--60283
93
2.0
95
88
6
283
34
16
23
25
1.95
60099--60304
94
2.2
94
86
5
292
34
16
23
25
1.95
60633--60769
53
2.6
54
83
2
177
27
18
21
32
1.97
64162--64242
21
3.9
21
96
0
144
24
27
18
29
1.98
68741--68784
20
2.2
20
87
0
61
13
22
0
63
1.29
72052--72100
23
2.1
23
88
7
73
30
2
12
55
1.48

Tables:   1

The End!