Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004778.1 Hibiscus syriacus cultivar Beakdansim tig00010774_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52940

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3538--3574
14
2.6
14
91
8
58
10
8
13
67
1.41
15923--15994
20
3.4
21
84
5
92
25
0
29
45
1.53
28347--28440
31
3.0
31
80
1
89
55
7
2
35
1.40
28363--28440
31
2.5
31
82
0
93
58
7
0
33
1.26
28875--29030
61
2.6
60
76
12
149
41
7
21
29
1.79
33715--33753
21
1.9
20
84
5
51
43
28
25
2
1.68
34720--34762
21
2.0
20
82
8
50
55
2
2
39
1.25
44187--44212
13
2.0
13
100
0
52
53
15
15
15
1.73
44790--44815
7
3.7
7
100
0
52
46
0
0
53
1.00
48355--48422
23
2.9
22
78
8
73
36
0
2
60
1.12
48730--48754
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!