Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004784.1 Hibiscus syriacus cultivar Beakdansim tig00010787_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61396

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
894--938
22
2.1
21
84
8
56
31
8
0
60
1.28
1551--1602
22
2.4
22
96
3
97
21
30
34
13
1.92
1648--1706
29
2.0
29
83
6
75
22
33
32
11
1.90
6772--6847
36
2.1
36
97
0
143
31
10
14
43
1.79
7269--7298
15
2.0
15
100
0
60
13
26
46
13
1.80
11771--11846
36
2.1
36
97
0
143
31
10
14
43
1.79
12892--12944
8
6.4
8
75
16
54
71
0
0
28
0.86
12810--12910
52
2.0
51
86
5
141
55
5
1
36
1.36
12891--12928
15
2.5
15
87
12
51
76
0
0
23
0.79
19017--19061
19
2.3
19
85
11
56
33
20
6
40
1.78
22619--22660
21
2.0
21
100
0
84
47
14
9
28
1.75
23261--23305
19
2.3
20
85
11
58
33
17
6
42
1.76
24427--24478
24
2.2
24
96
0
95
40
17
15
26
1.89
32348--32456
2
60.5
2
72
23
82
44
0
0
54
1.06
32347--32431
23
3.3
25
79
12
93
44
0
0
55
0.99
32394--32460
34
2.0
33
91
5
109
41
1
0
56
1.08
34343--34442
25
4.0
24
66
27
66
46
10
0
44
1.37
34293--34442
74
2.0
74
100
0
300
45
10
0
44
1.38
34482--34560
31
2.5
31
73
15
81
39
10
12
37
1.77
34818--34965
15
9.5
15
84
10
163
47
0
1
50
1.09
34908--35012
22
4.7
22
68
12
61
39
0
8
52
1.32
34930--34965
14
2.5
14
95
4
63
38
0
0
61
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34945--35042
32
3.4
32
73
26
126
35
0
11
53
1.37
34945--35493
54
10.1
54
73
18
446
32
0
13
52
1.44
34990--35385
80
4.9
80
93
3
666
32
0
14
52
1.44
35067--35118
18
3.1
18
68
21
58
26
0
15
57
1.38
34945--35493
166
3.4
164
78
14
568
32
0
13
52
1.44
35321--35587
22
9.9
29
65
32
125
33
0
12
53
1.44
35236--35588
188
1.9
188
96
0
652
33
0
12
52
1.44
35424--35573
80
1.9
80
95
0
273
31
0
15
53
1.42
35603--35661
31
1.9
31
92
0
100
42
10
6
40
1.65
36004--36032
14
2.0
15
93
6
51
0
20
55
24
1.44
42799--42898
20
5.0
20
81
4
121
28
17
28
27
1.97
42808--42928
60
2.0
60
86
0
170
28
14
26
29
1.95
43113--43147
18
2.0
18
88
5
54
48
20
0
31
1.50

Tables:   1

The End!