Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004785.1 Hibiscus syriacus cultivar Beakdansim tig00010789_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53824

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
494--566
18
3.9
18
84
7
101
19
20
31
28
1.97
4698--4885
95
2.0
91
91
6
306
52
4
14
28
1.61
6666--7057
192
2.0
192
99
0
775
41
16
20
20
1.90
18100--18145
13
3.6
13
85
5
67
17
19
43
19
1.88
20806--20860
12
4.8
12
91
8
96
27
14
25
32
1.95
20806--20860
22
2.4
23
93
6
94
27
14
25
32
1.95
27733--27776
19
2.2
20
88
8
72
50
4
2
43
1.35
27740--27778
19
2.1
19
100
0
78
46
5
0
48
1.24
40977--41138
82
2.0
82
97
0
306
29
12
10
47
1.74
44864--44895
16
2.0
16
93
0
55
62
21
6
9
1.47
52313--52365
3
17.3
3
80
3
52
66
0
0
33
0.92

Tables:   1

The End!