Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004791.1 Hibiscus syriacus cultivar Beakdansim tig00010801_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55631

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6333--6371
19
2.1
19
95
4
71
46
10
0
43
1.37
6917--6960
19
2.3
19
88
0
61
56
4
0
38
1.20
11017--11071
3
17.3
3
92
7
83
0
32
0
67
0.91
16959--17439
161
3.0
161
92
1
821
36
23
8
31
1.85
17820--17976
50
3.1
49
80
10
140
19
30
31
17
1.95
17850--17976
51
2.5
50
85
1
155
18
29
34
17
1.94
17850--17976
50
2.5
50
84
3
157
18
29
34
17
1.94
19220--19245
10
2.6
10
100
0
52
50
0
0
50
1.00
20512--20569
29
1.9
31
86
6
84
39
20
1
37
1.63
21106--21199
47
2.0
47
95
0
170
34
8
4
53
1.51
21118--21193
23
3.3
23
71
10
82
36
6
3
52
1.46
21130--21204
23
3.2
22
68
17
62
34
10
4
50
1.56
27072--27136
2
32.5
2
100
0
130
50
0
0
49
1.00
30920--30948
14
2.1
14
100
0
58
41
0
13
44
1.44
50268--50354
35
2.5
34
78
12
88
55
10
6
27
1.59
52600--52675
16
4.4
16
80
12
80
65
0
1
32
1.01
52603--52661
8
6.9
9
74
14
54
64
0
1
33
1.04
52600--52675
25
3.0
24
76
16
73
65
0
1
32
1.01
53384--53414
16
1.9
16
93
0
53
45
0
3
51
1.17
54384--54455
21
3.5
20
72
22
60
45
2
1
50
1.25
54748--54797
20
2.5
20
93
0
82
42
16
14
28
1.86

Tables:   1

The End!