Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004802.1 Hibiscus syriacus cultivar Beakdansim tig00010817_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58492

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21074--21105
15
2.3
15
89
10
50
9
6
3
81
0.97
24856--25002
75
2.0
75
86
0
204
29
22
20
27
1.98
32234--32306
36
2.0
36
94
0
128
41
2
10
45
1.54
32577--32649
24
3.0
24
91
0
128
10
13
21
53
1.71
32578--32649
10
6.4
10
72
22
54
11
12
22
54
1.69
32588--32642
14
4.2
14
71
17
55
10
12
21
54
1.68
32584--32662
24
3.3
23
87
3
104
13
11
17
56
1.66
33739--33811
16
4.7
16
91
3
114
10
10
19
58
1.61
33739--33803
32
2.0
32
100
0
130
9
12
21
56
1.63
33871--33911
16
2.7
16
81
7
50
14
9
17
58
1.62
35637--35693
16
3.4
17
82
17
66
36
8
28
26
1.86
41312--41366
28
2.0
28
89
7
85
58
5
1
34
1.32
45056--45083
11
2.5
11
100
0
56
7
17
67
7
1.37
47104--47159
25
2.2
24
81
6
58
19
10
5
64
1.44
49751--49813
34
1.9
33
84
12
85
20
26
0
52
1.47
52901--52985
38
2.2
38
91
0
134
23
28
22
25
1.99
57153--57190
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!