Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004808.1 Hibiscus syriacus cultivar Beakdansim tig00010829_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45151

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5027--5056
2
15.0
2
100
0
60
50
0
0
50
1.00
10130--10249
59
2.0
59
84
9
156
32
10
15
40
1.82
10882--10927
17
2.8
17
80
12
51
60
0
0
39
0.97
10876--10926
16
3.1
16
81
10
59
62
0
0
37
0.95
12085--12167
41
2.0
44
83
11
111
30
16
6
46
1.71
32865--32903
19
2.1
19
95
0
69
38
12
12
35
1.82
33550--33645
31
3.1
31
76
5
88
39
13
9
37
1.77
35607--35641
7
5.0
7
92
0
61
54
0
0
45
0.99
37971--38499
264
2.0
265
98
0
1024
27
15
18
39
1.91
39161--39196
10
3.5
10
92
3
54
50
27
11
11
1.72

Tables:   1

The End!