Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004809.1 Hibiscus syriacus cultivar Beakdansim tig00010830_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51882

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
849--886
11
3.5
11
89
10
53
65
0
0
34
0.93
5147--5208
30
2.1
30
90
3
99
35
16
0
48
1.46
16028--16061
17
2.1
16
88
5
50
61
5
17
14
1.52
20636--20669
17
2.1
16
88
5
50
61
5
17
14
1.52
23803--23986
91
2.0
91
98
0
359
32
21
15
31
1.94
24237--24303
6
11.2
6
100
0
134
34
49
16
0
1.46
24304--24385
5
16.4
5
96
0
101
26
31
40
1
1.64
24352--24396
5
9.4
5
97
2
76
35
22
42
0
1.54
25912--25987
38
2.1
36
82
5
89
39
9
14
36
1.78
27139--27175
20
1.9
19
89
10
58
51
10
18
18
1.75
39778--39819
16
2.6
16
81
7
50
69
2
0
28
1.01
41044--41124
41
2.0
41
85
4
110
46
6
2
44
1.41
48065--48097
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!