Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004813.1 Hibiscus syriacus cultivar Beakdansim tig00010848_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71171

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7336--7382
16
2.9
16
93
0
76
21
23
12
42
1.87
7370--7398
15
1.9
15
100
0
58
20
31
6
41
1.79
7580--7624
21
2.1
22
91
4
74
55
0
0
44
0.99
7660--7700
21
2.0
21
95
0
73
43
0
2
53
1.13
10420--10748
102
3.3
102
89
2
511
51
17
9
21
1.74
11487--11530
21
2.2
20
87
4
61
25
0
22
52
1.48
11651--11757
42
2.6
42
95
1
189
41
13
6
39
1.70
11684--11757
24
3.3
24
64
21
61
40
13
6
39
1.71
12100--12488
2
196.0
2
63
20
86
43
4
3
47
1.42
12181--12211
13
2.4
13
94
0
53
41
3
6
48
1.45
12261--12337
13
5.8
13
72
17
52
40
7
6
45
1.59
12280--12457
78
2.3
80
87
6
251
44
4
5
46
1.45
12449--12488
17
2.4
17
87
8
55
40
2
0
57
1.12
12317--12483
36
4.4
36
75
14
106
44
2
4
48
1.35
16702--16786
44
1.9
44
88
4
127
40
5
5
48
1.52
18008--18059
25
2.0
26
85
3
70
46
7
0
46
1.31
18529--18646
34
3.7
33
76
14
104
40
1
3
54
1.27
18567--18720
16
9.8
16
68
25
75
36
1
2
59
1.19
18556--18693
44
3.2
43
79
13
144
37
1
3
57
1.25
18557--18697
7
19.9
7
71
23
91
37
1
3
57
1.25
18615--18704
23
3.7
23
69
16
58
34
2
2
61
1.21
18674--18731
25
2.3
25
82
5
64
27
0
1
70
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26573--26637
16
4.1
16
87
0
103
7
12
23
56
1.61
34938--34971
16
2.1
16
94
0
59
32
26
8
32
1.87
40688--40720
16
2.0
17
94
5
59
36
24
6
33
1.80
43366--43426
29
2.1
29
93
0
104
31
18
24
26
1.97
45054--45192
33
4.2
33
85
3
190
48
10
21
19
1.77
45054--45192
65
2.1
67
86
6
194
48
10
21
19
1.77
48287--48333
16
3.1
15
87
9
60
40
0
17
42
1.49
48287--48394
27
4.3
25
73
16
80
39
1
12
46
1.52
48303--48334
16
2.0
16
100
0
64
37
0
18
43
1.51
48387--48456
24
3.0
23
83
8
70
50
2
5
41
1.41
48487--48529
16
2.7
16
78
7
52
41
9
11
37
1.74
48509--48550
22
1.9
22
90
9
68
40
7
11
40
1.69
48579--48618
17
2.5
15
88
8
53
45
0
2
52
1.14
49008--49111
24
4.4
23
79
12
88
41
5
2
50
1.41
49068--49185
59
2.0
60
89
1
184
47
9
2
40
1.49
49148--49176
15
1.9
15
100
0
58
55
10
0
34
1.34
56547--56622
17
4.7
17
76
12
88
36
0
17
46
1.48
56532--56622
47
1.9
47
97
0
173
39
0
16
43
1.48
64084--64130
16
3.1
15
75
19
53
65
2
6
25
1.27

Tables:   1

The End!