Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004814.1 Hibiscus syriacus cultivar Beakdansim tig00010849_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61192

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67--113
24
2.0
24
87
8
69
46
0
0
53
1.00
75--137
28
2.3
26
78
7
72
42
1
0
55
1.09
332--385
23
2.4
22
96
3
99
50
0
0
50
1.00
1490--1547
29
1.9
31
89
6
93
41
6
6
44
1.58
3224--3340
41
2.8
42
82
8
123
28
15
17
39
1.90
4420--4530
29
3.8
29
95
0
186
16
32
35
16
1.91
4583--4620
20
1.9
20
94
0
67
15
13
50
21
1.78
4868--4944
24
2.8
29
79
20
110
16
23
38
20
1.92
5353--5397
22
2.0
23
91
4
74
24
0
17
57
1.40
8978--9244
23
11.3
23
73
19
137
43
1
8
46
1.45
9040--9273
25
9.7
25
72
16
156
43
2
7
46
1.46
9104--9198
34
2.8
32
73
25
97
44
2
9
44
1.48
8977--9201
122
1.9
120
95
2
398
44
2
8
44
1.47
9220--9258
14
3.0
13
88
7
53
43
2
5
48
1.38
11813--11907
44
2.2
41
77
20
95
48
11
0
40
1.40
11805--11894
44
2.0
47
83
14
120
48
11
0
40
1.39
11804--11937
41
3.1
43
78
12
114
49
11
0
39
1.39
11826--11962
41
3.3
39
74
13
89
48
10
0
39
1.44
12488--12592
30
3.6
29
90
2
149
20
31
31
16
1.95
12611--12664
28
1.9
28
100
0
108
22
31
22
24
1.98
12668--12707
9
4.2
9
81
12
53
12
17
32
37
1.87
12668--12706
20
2.0
20
94
0
69
12
17
30
38
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12694--12739
21
2.2
21
92
3
76
15
26
28
30
1.96
14526--14550
13
1.9
13
100
0
50
52
0
0
48
1.00
34797--34826
14
2.1
14
100
0
60
20
16
30
33
1.94
43370--43403
16
2.1
16
89
10
52
11
17
35
35
1.87
45839--45892
27
2.0
27
88
0
81
33
20
12
33
1.91
50164--50204
16
2.6
17
77
14
52
39
24
9
26
1.86
50975--51000
5
5.2
5
100
0
52
23
57
19
0
1.40
53060--53154
41
2.3
41
92
0
163
23
17
24
34
1.96
53912--53954
21
2.0
21
81
0
50
30
30
25
13
1.94
53934--54083
66
2.3
67
92
3
250
28
28
27
16
1.97
54698--54754
22
2.5
23
94
2
98
17
26
31
24
1.97
54698--54764
22
3.0
23
88
2
82
19
23
28
28
1.98
60817--60964
66
2.2
65
91
4
235
29
27
25
16
1.97

Tables:   1

The End!