Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004815.1 Hibiscus syriacus cultivar Beakdansim tig00010850_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62370

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4663--4707
4
11.2
4
87
0
63
42
31
2
24
1.67
5539--5567
12
2.4
12
100
0
58
65
0
34
0
0.93
12651--12961
155
2.0
155
98
0
595
35
17
22
25
1.95
16608--16766
82
1.9
82
97
0
300
47
3
6
42
1.44
17949--17994
19
2.3
20
78
10
51
34
43
0
21
1.53
18262--18290
2
14.5
2
100
0
58
48
0
0
51
1.00
19391--19455
33
2.0
33
96
0
121
35
18
15
30
1.92
20159--20234
36
2.1
36
97
0
143
43
14
10
31
1.79
24707--24736
15
2.0
15
100
0
60
13
46
26
13
1.80
25165--25240
36
2.1
36
97
0
143
43
14
10
31
1.79
27054--27113
19
3.2
19
66
4
59
46
1
6
45
1.39
37349--37420
35
2.1
35
91
0
117
44
25
0
30
1.54
38510--38577
35
1.9
35
87
0
100
32
0
20
47
1.51
39620--39804
93
2.0
90
93
3
316
28
21
12
36
1.91
45851--45908
20
2.9
20
92
0
89
39
8
27
24
1.84
49418--49523
36
3.0
35
95
2
194
31
4
22
41
1.74
56166--56256
18
4.9
18
80
5
110
28
30
19
20
1.97
56164--56236
38
1.9
38
91
0
119
27
28
20
23
1.99
56487--56532
2
24.5
2
78
12
53
45
2
2
50
1.26
61814--61875
22
2.8
22
95
0
106
33
22
19
24
1.97

Tables:   1

The End!