Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004820.1 Hibiscus syriacus cultivar Beakdansim tig00010863_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79710

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1448--1476
14
2.1
14
93
6
51
68
6
6
17
1.34
6608--6703
42
2.3
42
100
0
192
34
27
14
23
1.94
6608--6725
42
2.7
42
88
6
121
33
27
15
22
1.94
9711--9746
2
18.0
2
100
0
72
50
0
0
50
1.00
17628--17661
16
2.1
16
100
0
68
38
32
11
17
1.86
21284--21334
20
2.5
20
81
6
59
49
3
3
43
1.39
38897--38973
23
3.2
23
68
21
68
50
1
7
40
1.39
38900--38979
26
3.2
26
72
16
96
47
2
7
42
1.45
38894--38999
49
2.2
49
98
0
203
50
1
5
42
1.37
41728--41755
2
14.0
2
100
0
56
50
0
50
0
1.00
45662--45703
21
2.0
20
86
4
57
50
2
0
47
1.14
49024--49254
126
1.8
128
80
5
281
33
18
22
25
1.97
52794--52826
15
2.3
15
90
10
52
63
3
6
27
1.32
53911--53981
31
2.3
31
90
0
106
32
9
8
49
1.66

Tables:   1

The End!