Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004830.1 Hibiscus syriacus cultivar Beakdansim tig00010878_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71979

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2295--2346
27
1.9
27
100
0
104
48
36
7
7
1.61
5520--5560
18
2.3
18
100
0
82
26
14
17
41
1.88
9554--9611
29
2.0
29
82
0
71
15
36
25
22
1.94
10340--10385
18
2.6
18
89
6
67
23
13
39
23
1.90
17159--17211
25
2.3
23
83
9
63
43
15
1
39
1.57
24804--24921
60
2.0
60
81
0
137
29
11
16
41
1.85
25353--25394
22
2.0
21
86
13
59
30
11
9
47
1.72
28658--28770
12
9.3
13
67
14
80
34
23
18
23
1.96
28657--28792
24
5.7
24
90
0
200
34
22
19
23
1.97
31365--31414
21
2.4
21
87
9
68
10
24
56
10
1.63
32744--32820
38
2.0
38
94
0
136
59
10
10
19
1.58
32758--32839
38
2.1
38
86
4
110
62
8
7
21
1.49
34367--34400
17
2.1
17
88
5
52
52
8
11
26
1.67
40481--40550
35
2.0
35
100
0
140
28
17
20
34
1.95
43324--43410
30
2.9
30
100
0
174
56
6
13
22
1.61
44871--44899
14
2.1
14
93
6
51
68
6
6
17
1.34
50094--50189
42
2.3
42
100
0
192
34
27
14
23
1.94
50094--50211
42
2.7
42
88
6
121
33
27
15
22
1.94
61086--61110
12
2.1
12
100
0
50
44
32
16
8
1.76
64715--64753
20
1.9
20
85
15
53
48
5
5
41
1.47

Tables:   1

The End!