Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004835.1 Hibiscus syriacus cultivar Beakdansim tig00010895_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57685

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14706--14813
39
2.8
37
81
12
119
37
14
1
46
1.56
14855--14948
34
2.7
34
75
8
100
27
5
6
60
1.43
16093--16122
16
1.9
15
93
6
51
43
0
23
33
1.54
27133--27249
42
2.8
42
92
0
198
17
17
17
47
1.84
27438--27528
21
3.8
23
72
12
60
50
1
0
48
1.08
27421--27484
23
2.6
24
79
18
62
51
0
0
48
1.00
27447--27614
30
6.0
30
68
26
86
45
1
1
51
1.16
27430--27506
30
2.4
34
75
18
85
49
0
0
50
1.00
27780--27849
20
3.5
20
94
0
122
35
14
8
41
1.76
27832--27913
15
5.5
15
88
2
121
35
19
7
37
1.80
27832--27913
30
2.8
30
94
1
139
35
19
7
37
1.80
27832--27918
45
2.0
44
93
2
147
33
19
6
40
1.78
47578--47606
8
3.6
8
100
0
58
34
0
0
65
0.93
47718--47894
63
2.9
61
75
17
163
33
21
4
40
1.73
48995--49032
20
1.9
20
94
0
67
39
5
26
28
1.78
49186--49268
39
2.2
36
76
6
85
50
3
1
44
1.27
51763--51816
20
2.8
20
88
2
83
12
16
22
48
1.80
53526--53642
21
5.5
23
76
9
83
22
12
31
33
1.92
53753--53794
12
3.5
12
83
6
50
23
0
7
69
1.13
53937--54037
42
2.4
42
85
3
123
21
21
21
34
1.97
53962--54042
21
3.8
21
85
1
99
20
22
22
34
1.97
55937--55972
18
2.0
18
94
0
63
16
2
25
55
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56849--56912
30
2.1
30
88
0
92
34
26
18
20
1.96

Tables:   1

The End!