Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004837.1 Hibiscus syriacus cultivar Beakdansim tig00010905_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73813

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14175--14211
18
2.1
18
89
0
56
45
27
5
21
1.73
42377--42435
27
2.1
29
81
9
68
18
16
23
40
1.91
48650--48719
31
2.3
31
90
5
106
32
8
21
37
1.84
52770--52811
22
1.9
22
85
9
59
66
7
2
23
1.28
53908--53995
32
2.8
31
75
3
86
35
3
13
47
1.60
56030--56076
20
2.3
20
85
0
67
34
25
19
21
1.96
56073--56131
20
3.0
21
82
9
70
45
23
11
18
1.83
56081--56141
20
3.0
20
80
7
70
45
21
14
18
1.84
56152--56218
20
3.3
20
82
2
89
44
14
20
19
1.86
56252--56297
23
2.0
22
88
12
67
52
0
4
43
1.21
56579--56657
41
1.9
42
86
2
115
21
20
12
45
1.84
56565--56646
21
4.0
21
87
6
105
20
19
13
46
1.83
56579--56657
21
3.8
21
86
1
97
21
20
12
45
1.84
67352--67404
27
2.0
27
100
0
106
49
35
7
7
1.60
70621--70664
18
2.4
18
100
0
88
25
15
18
40
1.90

Tables:   1

The End!