Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004841.1 Hibiscus syriacus cultivar Beakdansim tig00010914_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50880

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8813--8862
17
3.0
16
78
18
57
42
12
2
44
1.53
9115--9156
22
1.9
22
85
0
57
52
0
0
47
1.00
9421--9464
17
2.7
16
82
6
61
68
0
0
31
0.90
9421--9472
16
3.2
15
76
15
50
67
0
1
30
1.02
19601--19631
16
1.9
16
93
0
53
48
0
0
51
1.00
22328--22366
19
2.1
18
90
4
60
46
2
5
46
1.38
25750--26087
178
1.9
178
90
1
534
29
13
15
40
1.86
31345--31370
2
13.0
2
100
0
52
50
0
0
50
1.00
36537--36599
32
1.9
33
93
3
110
39
14
15
30
1.87
42788--42848
23
2.7
23
84
0
77
29
26
24
19
1.99
43169--43199
16
1.9
16
93
0
53
45
16
3
35
1.63
44341--44400
22
2.9
21
92
5
95
18
28
23
30
1.98
48407--48437
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!