Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004842.1 Hibiscus syriacus cultivar Beakdansim tig00010919_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62971

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22327--22776
190
2.3
191
82
4
521
40
20
13
26
1.89
26062--26090
15
1.9
15
100
0
58
48
13
24
13
1.79
26061--26097
15
2.5
15
86
0
56
48
13
24
13
1.78
35130--35201
36
2.0
36
97
0
135
29
18
11
41
1.84
39386--39425
20
2.0
20
100
0
80
30
20
15
35
1.93
39529--39574
2
23.0
2
100
0
92
50
0
0
50
1.00
51980--52058
32
2.5
32
97
0
149
25
8
21
44
1.81
52903--52933
16
1.9
16
100
0
62
6
12
22
58
1.58
54233--54317
38
2.3
37
78
13
93
45
2
2
49
1.27
54463--54499
20
1.9
19
89
10
58
18
18
10
51
1.75
54558--54584
4
6.8
4
100
0
54
74
0
0
25
0.83
54743--54772
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!