Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004848.1 Hibiscus syriacus cultivar Beakdansim tig00010929_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81473

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7257--7610
42
8.5
42
86
1
460
26
21
16
35
1.95
7594--7629
18
2.0
18
100
0
72
11
22
27
38
1.88
9134--9352
41
5.3
41
71
14
139
28
22
16
31
1.96
9104--9347
82
3.0
82
80
9
248
31
22
15
29
1.96
10505--10611
33
3.4
31
86
10
139
26
46
15
11
1.79
10565--10647
29
2.9
29
88
0
112
20
39
25
14
1.90
10650--10701
26
2.0
26
92
0
86
23
34
19
23
1.96
10716--10759
23
1.9
23
95
0
79
22
20
27
29
1.99
11710--11772
17
3.6
17
72
16
65
36
0
9
53
1.33
11732--11776
21
2.2
21
84
4
56
35
0
8
55
1.31
12033--12101
27
2.5
28
78
7
77
47
5
2
43
1.42
14875--14935
23
2.7
23
89
0
95
26
27
26
19
1.99
15046--15081
18
2.0
18
94
0
63
36
33
19
11
1.87
14942--15305
121
3.0
121
95
0
656
35
24
14
25
1.94
15167--15202
18
2.0
18
94
0
63
33
33
19
13
1.91
14972--15288
62
5.2
63
61
23
158
35
23
14
25
1.93
16518--16675
63
2.5
61
83
9
185
26
20
18
33
1.96
16643--16680
19
2.0
20
94
5
69
26
28
15
28
1.96
18172--18203
10
3.2
10
100
0
64
21
9
9
59
1.57
18205--18853
60
11.2
60
73
16
509
41
1
11
45
1.51
18206--18346
21
7.1
20
64
18
69
42
0
12
44
1.42
18379--18405
10
2.7
10
100
0
54
40
0
18
40
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18405--18454
21
2.3
22
80
10
59
40
0
8
52
1.31
18426--18469
14
3.4
14
78
18
58
36
0
18
45
1.49
18544--18632
21
4.4
20
70
17
58
46
0
8
44
1.35
18615--19161
48
10.3
49
73
20
376
41
2
10
45
1.50
18821--18868
14
3.6
14
81
16
66
35
0
16
47
1.47
18205--19112
395
2.3
392
91
6
1435
41
2
11
44
1.53
19084--19180
14
6.7
14
72
19
65
38
0
12
49
1.41
18607--19262
312
2.0
327
90
6
1054
41
3
11
44
1.56
21393--21423
15
2.1
14
94
5
53
54
6
0
38
1.26
21920--21984
26
2.3
29
82
15
100
6
35
6
52
1.51
22280--22336
29
2.0
29
89
0
87
24
26
31
17
1.97
22594--22662
32
2.2
32
89
5
104
13
14
44
27
1.82
48212--48236
7
3.6
7
100
0
50
12
16
12
60
1.60
56810--56856
23
2.0
23
87
0
67
21
0
21
57
1.41
57384--57469
29
3.1
29
75
18
76
25
2
3
68
1.17
65439--65465
2
13.5
2
100
0
54
48
0
51
0
1.00
67555--67585
4
7.8
4
100
0
62
25
0
0
74
0.82
67642--67684
20
2.3
19
88
8
61
51
9
18
20
1.74
67830--67917
39
2.3
38
76
11
88
51
2
2
44
1.26
70088--70166
32
2.5
32
97
0
149
44
21
8
25
1.81

Tables:   1

The End!