Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004850.1 Hibiscus syriacus cultivar Beakdansim tig00010931_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73506

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
431--633
106
1.9
104
92
7
338
30
14
11
43
1.81
2040--2106
12
5.8
12
75
16
52
25
20
11
41
1.87
15316--15376
16
3.8
16
86
0
86
59
19
11
9
1.60
19473--19527
24
2.3
24
90
0
83
54
20
10
14
1.69
21367--21819
149
3.0
149
99
0
888
34
20
17
27
1.95
22702--22736
18
1.9
18
88
11
54
22
17
5
54
1.64
23320--23364
21
2.1
21
87
0
63
15
24
28
31
1.96
26395--26847
149
3.0
149
99
0
888
34
20
17
27
1.95
27731--27765
18
1.9
18
88
11
54
22
17
5
54
1.64
28348--28392
21
2.1
21
87
0
63
15
24
26
33
1.95
31626--31702
3
26.0
3
79
12
79
59
0
0
40
0.97
31954--32049
40
2.4
40
85
1
131
18
25
9
46
1.79
31989--32646
113
5.8
113
90
3
968
27
20
15
36
1.93
31992--32614
340
1.8
338
91
3
1020
27
20
14
37
1.92
33320--33540
114
1.9
114
90
0
352
30
19
14
34
1.93
33838--33886
16
2.8
17
78
12
55
46
6
10
36
1.63
34220--34262
6
7.3
6
80
15
54
0
16
0
83
0.64
34233--34263
16
2.0
16
93
6
55
0
22
0
77
0.77
46724--46798
3
25.0
3
84
10
91
60
0
0
40
0.97
46724--46806
30
2.8
30
84
13
118
61
0
0
38
0.96
46993--47052
2
30.0
2
100
0
120
50
0
0
50
1.00
64839--64887
21
2.3
21
100
0
98
38
26
8
26
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68515--68568
24
2.2
24
83
0
63
50
16
11
22
1.77
70417--70449
16
2.1
16
88
5
50
75
9
0
15
1.03
70432--70529
45
2.2
46
78
12
105
71
5
7
16
1.26
70587--70645
2
29.5
2
100
0
118
50
0
0
49
1.00
72425--72722
121
2.4
120
83
5
355
24
16
24
35
1.95
72505--72771
121
2.2
121
83
7
330
23
16
24
34
1.95
72684--72839
60
2.7
58
83
6
192
26
17
19
37
1.93

Tables:   1

The End!