Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004858.1 Hibiscus syriacus cultivar Beakdansim tig00010956_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42528

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2146--2199
20
2.7
20
94
0
90
42
16
9
31
1.80
2726--2782
26
2.1
27
96
3
107
40
3
12
43
1.59
6698--6732
18
1.9
18
94
0
61
54
25
2
17
1.57
6892--7002
20
5.8
20
75
14
101
36
23
17
23
1.95
6900--7035
34
3.8
34
75
12
121
37
23
17
21
1.94
6894--7044
74
2.1
73
83
3
187
37
21
17
22
1.94
7045--7083
20
2.0
20
94
0
69
7
20
23
48
1.75
7053--7098
20
2.3
20
85
7
58
13
15
28
43
1.83
8951--8984
12
2.7
13
90
9
61
0
38
0
61
0.96
8950--8987
12
3.2
12
92
3
60
0
36
0
63
0.95
11319--11366
19
2.5
20
75
3
53
50
8
12
29
1.69
12140--12177
20
1.9
20
88
0
58
44
7
7
39
1.63
12503--12560
18
3.1
18
76
13
62
32
10
8
48
1.68
25726--25760
17
2.1
17
94
0
61
14
17
20
48
1.81
25738--25793
24
2.3
24
87
0
76
19
12
17
50
1.78
40484--40519
2
18.5
2
88
5
56
47
0
2
50
1.15
42392--42461
9
8.8
8
73
20
58
25
27
5
41
1.78
42391--42461
16
4.4
16
89
0
115
25
26
5
42
1.77
42391--42461
32
2.2
32
97
0
133
25
26
5
42
1.77

Tables:   1

The End!