Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01004862.1 Hibiscus syriacus cultivar Beakdansim tig00010968_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 2846896
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
File 1 of 13
Found at i:97 original size:50 final size:45
Alignment explanation
Indices: 62--214 Score: 211
Period size: 46 Copynumber: 3.4 Consensus size: 45
52 TCCTAATGCA
62 TAATGC-TCCTTTCATGCATTTAGTTATGGCATCCTTTCATGCCT
1 TAATGCATCCTTTCATGCATTTAGTTATGGCATCCTTTCATGCCT
* *
106 TAATGCATCCTTTCATGCATTTAAGTTATGTCATCCTTTCACGCCT
1 TAATGCATCCTTTCATGCATTT-AGTTATGGCATCCTTTCATGCCT
* * *
152 TAATGCATCATTTCATGTATTTTAGTTATGGCATCATTTCA-GCCT
1 TAATGCATCCTTTCATGCA-TTTAGTTATGGCATCCTTTCATGCCT
* *
197 TAGTGCATCCATTCATGC
1 TAATGCATCCTTTCATGC
215 CTTAGTGCAT
Statistics
Matches: 96, Mismatches: 10, Indels: 5
0.86 0.09 0.05
Matches are distributed among these distances:
44 6 0.06
45 33 0.34
46 54 0.56
47 3 0.03
ACGTcount: A:0.22, C:0.24, G:0.13, T:0.42
Consensus pattern (45 bp):
TAATGCATCCTTTCATGCATTTAGTTATGGCATCCTTTCATGCCT
Found at i:115 original size:20 final size:20
Alignment explanation
Indices: 90--234 Score: 85
Period size: 20 Copynumber: 6.7 Consensus size: 20
80 TTTAGTTATG
90 GCATCCTTTCATGCCTTAAT
1 GCATCCTTTCATGCCTTAAT
*
110 GCATCCTTTCATGCATTTAAGTTAT
1 GCATCCTTTCATGC-CTT-A---AT
*
135 GTCATCCTTTCACGCCTTAAT
1 G-CATCCTTTCATGCCTTAAT
* **
156 GCATCATTTCATGTATTTTAGTTAT
1 GCATCCTTTCATG--CCTTA---AT
* *
181 GGCATCATTTCA-GCCTTAGT
1 -GCATCCTTTCATGCCTTAAT
* *
201 GCATCCATTCATGCCTTAGT
1 GCATCCTTTCATGCCTTAAT
*
221 GCATCCATTCATGC
1 GCATCCTTTCATGC
235 ATTTTAATTA
Statistics
Matches: 100, Mismatches: 12, Indels: 26
0.72 0.09 0.19
Matches are distributed among these distances:
19 9 0.09
20 47 0.47
21 5 0.05
22 4 0.04
23 3 0.03
24 1 0.01
25 8 0.08
26 23 0.23
ACGTcount: A:0.21, C:0.26, G:0.13, T:0.40
Consensus pattern (20 bp):
GCATCCTTTCATGCCTTAAT
Found at i:214 original size:111 final size:109
Alignment explanation
Indices: 85--323 Score: 320
Period size: 111 Copynumber: 2.2 Consensus size: 109
75 ATGCATTTAG
* **
85 TTATGGCATCCTTTCATGCCTTAATGCATCCTTTCATGCA-TTTAAGTTATGTCATCCTTTCACG
1 TTAT-GCATCCTTTCATGCCTTAATGCATCCATTCATGCATTTTAA-TTATGGAATCCTTTCACG
* * * *
149 CCTTAATGCATCATTTCATGTATTTTAGTTATGGCATCATTTCA-GCC
64 CCTT-ATGCATC-CTCCATGCATTTTAGTTATGGCACCATTTCATGCC
* * *
196 TTAGTGCATCCATTCATGCCTTAGTGCATCCATTCATGCATTTTAATTATGGAATCCTTTCATGC
1 TTA-TGCATCCTTTCATGCCTTAATGCATCCATTCATGCATTTTAATTATGGAATCCTTTCACGC
261 CTTATGCATCCTCCATGCATTTTAGTTATGGCACCATTTCATGCC
65 CTTATGCATCCTCCATGCATTTTAGTTATGGCACCATTTCATGCC
*
306 TTATGCATCTTTTCATGC
1 TTATGCATCCTTTCATGC
324 ATTTTAGTTA
Statistics
Matches: 113, Mismatches: 12, Indels: 8
0.85 0.09 0.06
Matches are distributed among these distances:
109 40 0.35
110 13 0.12
111 54 0.48
112 6 0.05
ACGTcount: A:0.21, C:0.24, G:0.13, T:0.41
Consensus pattern (109 bp):
TTATGCATCCTTTCATGCCTTAATGCATCCATTCATGCATTTTAATTATGGAATCCTTTCACGCC
TTATGCATCCTCCATGCATTTTAGTTATGGCACCATTTCATGCC
Found at i:224 original size:65 final size:65
Alignment explanation
Indices: 131--271 Score: 178
Period size: 65 Copynumber: 2.2 Consensus size: 65
121 TGCATTTAAG
* * * *
131 TTATGTCATCCTTTCACGCCTTAATGCAT-CATTTCATGTATTTTAGTTATGGCATCATTTCA-G
1 TTATG-CATCCATTCACGCCTTAATGCATCCA-TTCATGCATTTTAATTATGGAATCATTTCATG
194 CC
64 CC
* * *
196 TTAGTGCATCCATTCATGCCTTAGTGCATCCATTCATGCATTTTAATTATGGAATCCTTTCATGC
1 TTA-TGCATCCATTCACGCCTTAATGCATCCATTCATGCATTTTAATTATGGAATCATTTCATGC
261 C
65 C
262 TTATGCATCC
1 TTATGCATCC
272 TCCATGCATT
Statistics
Matches: 66, Mismatches: 7, Indels: 6
0.84 0.09 0.08
Matches are distributed among these distances:
65 56 0.85
66 10 0.15
ACGTcount: A:0.22, C:0.24, G:0.13, T:0.41
Consensus pattern (65 bp):
TTATGCATCCATTCACGCCTTAATGCATCCATTCATGCATTTTAATTATGGAATCATTTCATGCC
Found at i:284 original size:44 final size:44
Alignment explanation
Indices: 203--337 Score: 182
Period size: 44 Copynumber: 3.0 Consensus size: 44
193 GCCTTAGTGC
* *
203 ATCCATTCATGCCTTAGTGCATCCATTCATGCATTTTAATTATGGA
1 ATCCTTTCATGCCTTA-TGCATCC-TTCATGCATTTTAGTTATGGA
* *
249 ATCCTTTCATGCCTTATGCATCCTCCATGCATTTTAGTTATGGC
1 ATCCTTTCATGCCTTATGCATCCTTCATGCATTTTAGTTATGGA
*
293 A-CCATTTCATGCCTTATGCATCTTTTCATGCATTTTAGTTATGGA
1 ATCC-TTTCATGCCTTATGCATC-CTTCATGCATTTTAGTTATGGA
338 TTCGGTTTAG
Statistics
Matches: 80, Mismatches: 7, Indels: 5
0.87 0.08 0.05
Matches are distributed among these distances:
43 2 0.03
44 37 0.46
45 26 0.32
46 15 0.19
ACGTcount: A:0.22, C:0.23, G:0.13, T:0.41
Consensus pattern (44 bp):
ATCCTTTCATGCCTTATGCATCCTTCATGCATTTTAGTTATGGA
Found at i:3149 original size:55 final size:55
Alignment explanation
Indices: 3040--3487 Score: 546
Period size: 55 Copynumber: 8.2 Consensus size: 55
3030 TTCTTTGAGG
* * * ***
3040 TGCACACATAGTGCCTATACGATCATTC-TAAACATATTATGAATTATATGGTTT
1 TGCACACTTAGTGCCGATACGGTCATTCATAAACATATTATGAATTCCGTGGTTT
* *
3094 TACACACTTAGTGCCGATACGGTCATTCATAAACATAATATGAATTCCGTGGTTT
1 TGCACACTTAGTGCCGATACGGTCATTCATAAACATATTATGAATTCCGTGGTTT
* ** * * * *
3149 TGCACACTTAGTGTCGATATAGCCGTTCATAAACATATTATGAATTACATGGTTT
1 TGCACACTTAGTGCCGATACGGTCATTCATAAACATATTATGAATTCCGTGGTTT
* * *
3204 TACACACTTAGTGTCGATACGGTCATTCAT-AACATATTATGAATTCCATGGTTT
1 TGCACACTTAGTGCCGATACGGTCATTCATAAACATATTATGAATTCCGTGGTTT
* * * ** * * *
3258 TGCACAGTTAGTGCTGATATGGTTGTTCATAAACAAATTATGAATTTCGTGATTT
1 TGCACACTTAGTGCCGATACGGTCATTCATAAACATATTATGAATTCCGTGGTTT
* * *
3313 TGC-CACTTAGTGTCGATACGATCATTCATAAACATATTATAAATTCCGTGGTTT
1 TGCACACTTAGTGCCGATACGGTCATTCATAAACATATTATGAATTCCGTGGTTT
* * * *
3367 TGCACACTTAGTGCAGACACAGTCATTCATAAACATATTATGAATTCCGTTGTTT
1 TGCACACTTAGTGCCGATACGGTCATTCATAAACATATTATGAATTCCGTGGTTT
* *
3422 TGC-CACTTAGTGCCGATACGGTCGTTCAT-AACATATTATGAATTTCGTGGTTT
1 TGCACACTTAGTGCCGATACGGTCATTCATAAACATATTATGAATTCCGTGGTTT
3475 TGCACACTTAGTG
1 TGCACACTTAGTG
3488 TTGATAGTAC
Statistics
Matches: 332, Mismatches: 58, Indels: 8
0.83 0.15 0.02
Matches are distributed among these distances:
53 25 0.08
54 144 0.43
55 163 0.49
ACGTcount: A:0.29, C:0.18, G:0.17, T:0.36
Consensus pattern (55 bp):
TGCACACTTAGTGCCGATACGGTCATTCATAAACATATTATGAATTCCGTGGTTT
Found at i:3299 original size:109 final size:109
Alignment explanation
Indices: 3068--3493 Score: 561
Period size: 109 Copynumber: 3.9 Consensus size: 109
3058 ACGATCATTC
* *
3068 TAAACATATTATGAATTATATGGTTTTACACACTTAGTGCCGATACGGTCATTCATAAACATAAT
1 TAAACATATTATGAATTACATGGTTTTAC-CACTTAGTGCCGATACGGTCATTCATAAACATATT
*
3133 ATGAATTCCGTGGTTTTGCACACTTAGTG-TCGATATAGCCGTTCA
65 ATGAATTCCGTGGTTTTGCACACTTAGTGCT-GATATAGTCGTTCA
*
3178 TAAACATATTATGAATTACATGGTTTTACACACTTAGTGTCGATACGGTCATTCAT-AACATATT
1 TAAACATATTATGAATTACATGGTTTTAC-CACTTAGTGCCGATACGGTCATTCATAAACATATT
* * * *
3242 ATGAATTCCATGGTTTTGCACAGTTAGTGCTGATATGGTTGTTCA
65 ATGAATTCCGTGGTTTTGCACACTTAGTGCTGATATAGTCGTTCA
* * * * * * *
3287 TAAACAAATTATGAATTTCGTGATTTTGCCACTTAGTGTCGATACGATCATTCATAAACATATTA
1 TAAACATATTATGAATTACATGGTTTTACCACTTAGTGCCGATACGGTCATTCATAAACATATTA
* * * * *
3352 TAAATTCCGTGGTTTTGCACACTTAGTGCAGACACAGTCATTCA
66 TGAATTCCGTGGTTTTGCACACTTAGTGCTGATATAGTCGTTCA
* * * * *
3396 TAAACATATTATGAATTCCGTTGTTTTGCCACTTAGTGCCGATACGGTCGTTCAT-AACATATTA
1 TAAACATATTATGAATTACATGGTTTTACCACTTAGTGCCGATACGGTCATTCATAAACATATTA
* *
3460 TGAATTTCGTGGTTTTGCACACTTAGTGTTGATA
66 TGAATTCCGTGGTTTTGCACACTTAGTGCTGATA
3494 GTACACATAA
Statistics
Matches: 279, Mismatches: 35, Indels: 6
0.87 0.11 0.02
Matches are distributed among these distances:
108 63 0.23
109 161 0.58
110 55 0.20
ACGTcount: A:0.30, C:0.17, G:0.17, T:0.37
Consensus pattern (109 bp):
TAAACATATTATGAATTACATGGTTTTACCACTTAGTGCCGATACGGTCATTCATAAACATATTA
TGAATTCCGTGGTTTTGCACACTTAGTGCTGATATAGTCGTTCA
Found at i:4707 original size:30 final size:31
Alignment explanation
Indices: 4673--4746 Score: 107
Period size: 30 Copynumber: 2.4 Consensus size: 31
4663 ATACTTTACC
*
4673 ATTTATTTAATTTAA-TC-CTCCCGATTTTTA
1 ATTTATTTAATTTAATTCTCCCCCGA-TTTTA
4703 ATTTATTTAATTTAATTCTCCCCCGATTTTA
1 ATTTATTTAATTTAATTCTCCCCCGATTTTA
4734 ATTTATTTCAATT
1 ATTTATTT-AATT
4747 AGTCATTGAC
Statistics
Matches: 40, Mismatches: 1, Indels: 4
0.89 0.02 0.09
Matches are distributed among these distances:
30 15 0.38
31 15 0.38
32 10 0.25
ACGTcount: A:0.27, C:0.16, G:0.03, T:0.54
Consensus pattern (31 bp):
ATTTATTTAATTTAATTCTCCCCCGATTTTA
Found at i:8789 original size:45 final size:45
Alignment explanation
Indices: 8740--8840 Score: 150
Period size: 45 Copynumber: 2.2 Consensus size: 45
8730 TATTCATTAT
*
8740 TTTCATTTATGGCATCCTTTCATG-CTATTAATGCACAATTGTGCA
1 TTTCATTTATGGCATCCTTTCATGCCT-TTAATGCACAATTATGCA
** *
8785 TTTCATTTATGGCATCCTTTCATGCCTTTAATGCACCGTTATGGA
1 TTTCATTTATGGCATCCTTTCATGCCTTTAATGCACAATTATGCA
8830 TTTCATTTATG
1 TTTCATTTATG
8841 TAATGAAAAC
Statistics
Matches: 51, Mismatches: 4, Indels: 2
0.89 0.07 0.04
Matches are distributed among these distances:
45 49 0.96
46 2 0.04
ACGTcount: A:0.22, C:0.20, G:0.14, T:0.45
Consensus pattern (45 bp):
TTTCATTTATGGCATCCTTTCATGCCTTTAATGCACAATTATGCA
Found at i:9378 original size:95 final size:96
Alignment explanation
Indices: 9212--9412 Score: 262
Period size: 95 Copynumber: 2.1 Consensus size: 96
9202 CCCTACCATG
* * * *
9212 GTATCGATACTTCTATACTATGGTATTGATACACCCTTGTAGTATCGATACCATTTCTATATTTT
1 GTATCGATACTTCTATACTATGGTACTGATACACCCTTGTAGTATCGATACCATTTCGACATTCT
* *
9277 GTAATT-CATGGCATCGATAACTTTCTCTTA
66 GGAATTCCATAGCATCGATAACTTTCTCTTA
* * *
9307 GTATCGATACTTCTATACTATGGTACTGATACTCCCTT-TCAGTTTCTATACCATTTCGACATTC
1 GTATCGATACTTCTATACTATGGTACTGATACACCCTTGT-AGTATCGATACCATTTCGACATTC
* * * *
9371 TGGAATTCCCTAGTATCGATACCTTTCTCTTG
65 TGGAATTCCATAGCATCGATAACTTTCTCTTA
9403 GTATCGATAC
1 GTATCGATAC
9413 CCACAACAGT
Statistics
Matches: 91, Mismatches: 13, Indels: 3
0.85 0.12 0.03
Matches are distributed among these distances:
94 1 0.01
95 61 0.67
96 29 0.32
ACGTcount: A:0.24, C:0.22, G:0.13, T:0.41
Consensus pattern (96 bp):
GTATCGATACTTCTATACTATGGTACTGATACACCCTTGTAGTATCGATACCATTTCGACATTCT
GGAATTCCATAGCATCGATAACTTTCTCTTA
Found at i:12696 original size:55 final size:55
Alignment explanation
Indices: 12609--12957 Score: 369
Period size: 55 Copynumber: 6.3 Consensus size: 55
12599 TTCTTTGAGG
* * * * * **
12609 TGCACACGTAGTGCCTATACAGTCGTTGATAAACATATTATGAATTCCGTGGTTT
1 TGCACACTTAGAGCCGATACGGTCGTTCATAAACATATTATGAATTATGTGGTTT
* * * * * * *
12664 TCCACACATACAGTCGATACGGTTGTTCATAAACAAATTATGAATTTTGTGGTTT
1 TGCACACTTAGAGCCGATACGGTCGTTCATAAACATATTATGAATTATGTGGTTT
* *
12719 TGCACACTTAGTGCCGATATGGTCGTTCATAAACATATTATGAATTATGTGGTTT
1 TGCACACTTAGAGCCGATACGGTCGTTCATAAACATATTATGAATTATGTGGTTT
* * * * *
12774 TGCACACTTAGTGCTGATATGGTCGTTCTTAAACATATTATGAATTATGTTGTTT
1 TGCACACTTAGAGCCGATACGGTCGTTCATAAACATATTATGAATTATGTGGTTT
* * * * * *
12829 TGCACACTTAGTGCCGATACGGTCGTGCATAAATATATTATAAATTTTATGGTTT
1 TGCACACTTAGAGCCGATACGGTCGTTCATAAACATATTATGAATTATGTGGTTT
* * * * *
12884 TACACACTTA-ATGCCGATACGATCATTCATAAACATATTATGAATT-TCGCGATTT
1 TGCACACTTAGA-GCCGATACGGTCGTTCATAAACATATTATGAATTAT-GTGGTTT
*
12939 TGCACACTTAGTGCCGATA
1 TGCACACTTAGAGCCGATA
12958 GTACACATAA
Statistics
Matches: 246, Mismatches: 45, Indels: 6
0.83 0.15 0.02
Matches are distributed among these distances:
54 1 0.00
55 245 1.00
ACGTcount: A:0.29, C:0.17, G:0.17, T:0.37
Consensus pattern (55 bp):
TGCACACTTAGAGCCGATACGGTCGTTCATAAACATATTATGAATTATGTGGTTT
Found at i:12807 original size:110 final size:109
Alignment explanation
Indices: 12609--12957 Score: 412
Period size: 110 Copynumber: 3.2 Consensus size: 109
12599 TTCTTTGAGG
* * * * ** *
12609 TGCACACGTAGTGCCTATACAGTCGTTGATAAACATATTATGAATTCCGTGGTTTTCCACACATA
1 TGCACACTTAGTGCCGATACGGTCGTTCATAAACATATTATGAATTATGTGGTTTTACACAC-T-
* * *
12674 CAGT-CGATACGGTTGTTCATAAACAAATTATGAATTTTGTGGTTT
64 TAGTGCGATACGGTCGTTCATAAACATATTATGAATTTTGTGGTTT
* *
12719 TGCACACTTAGTGCCGATATGGTCGTTCATAAACATATTATGAATTATGTGGTTTTGCACACTTA
1 TGCACACTTAGTGCCGATACGGTCGTTCATAAACATATTATGAATTATGTGGTTTTACACACTTA
* * * *
12784 GTGCTGATATGGTCGTTCTTAAACATATTATGAATTATGTTGTTT
66 GTGC-GATACGGTCGTTCATAAACATATTATGAATTTTGTGGTTT
* * * * *
12829 TGCACACTTAGTGCCGATACGGTCGTGCATAAATATATTATAAATTTTATGGTTTTACACACTTA
1 TGCACACTTAGTGCCGATACGGTCGTTCATAAACATATTATGAATTATGTGGTTTTACACACTTA
* * * * * *
12894 ATGCCGATACGATCATTCATAAACATATTATGAATTTCGCGATTT
66 GTG-CGATACGGTCGTTCATAAACATATTATGAATTTTGTGGTTT
12939 TGCACACTTAGTGCCGATA
1 TGCACACTTAGTGCCGATA
12958 GTACACATAA
Statistics
Matches: 204, Mismatches: 32, Indels: 6
0.84 0.13 0.02
Matches are distributed among these distances:
108 3 0.01
109 2 0.01
110 198 0.97
111 1 0.00
ACGTcount: A:0.29, C:0.17, G:0.17, T:0.37
Consensus pattern (109 bp):
TGCACACTTAGTGCCGATACGGTCGTTCATAAACATATTATGAATTATGTGGTTTTACACACTTA
GTGCGATACGGTCGTTCATAAACATATTATGAATTTTGTGGTTT
Found at i:12884 original size:165 final size:165
Alignment explanation
Indices: 12609--12957 Score: 430
Period size: 165 Copynumber: 2.1 Consensus size: 165
12599 TTCTTTGAGG
* * ** ** *
12609 TGCACACGTAGTGCCTATACAGTCGTTGATAAACATATTATGAATTCCGTGGTTTTCCACACATA
1 TGCACACTTAGTGCCGATATGGTCGTTCTTAAACATATTATGAATTACGTGGTTTTCCACACATA
* * * * * * * *
12674 CAGTCGATACGGTTGTTCATAAACAAATTATGAATTTTGTGGTTTTGCACACTTAGTGCCGATAT
66 CAGCCGATACGGTCGTGCATAAACAAATTATAAATTTTATGGTTTTACACACTTAATGCCGATAC
* * * *
12739 GGTCGTTCATAAACATATTATGAATTAT-GTGGTTT
131 GATCATTCATAAACATATTATGAATT-TCGCGATTT
* * * * *
12774 TGCACACTTAGTGCTGATATGGTCGTTCTTAAACATATTATGAATTATGTTGTTTTGCACACTTA
1 TGCACACTTAGTGCCGATATGGTCGTTCTTAAACATATTATGAATTACGTGGTTTTCCACACATA
** * *
12839 GTGCCGATACGGTCGTGCATAAATATATTATAAATTTTATGGTTTTACACACTTAATGCCGATAC
66 CAGCCGATACGGTCGTGCATAAACAAATTATAAATTTTATGGTTTTACACACTTAATGCCGATAC
12904 GATCATTCATAAACATATTATGAATTTCGCGATTT
131 GATCATTCATAAACATATTATGAATTTCGCGATTT
12939 TGCACACTTAGTGCCGATA
1 TGCACACTTAGTGCCGATA
12958 GTACACATAA
Statistics
Matches: 154, Mismatches: 29, Indels: 2
0.83 0.16 0.01
Matches are distributed among these distances:
164 1 0.01
165 153 0.99
ACGTcount: A:0.29, C:0.17, G:0.17, T:0.37
Consensus pattern (165 bp):
TGCACACTTAGTGCCGATATGGTCGTTCTTAAACATATTATGAATTACGTGGTTTTCCACACATA
CAGCCGATACGGTCGTGCATAAACAAATTATAAATTTTATGGTTTTACACACTTAATGCCGATAC
GATCATTCATAAACATATTATGAATTTCGCGATTT
Found at i:15083 original size:21 final size:21
Alignment explanation
Indices: 15035--15089 Score: 67
Period size: 20 Copynumber: 2.7 Consensus size: 21
15025 CCCATATTCA
* **
15035 GAGTATCGATAGTCTACCCTC
1 GAGTATCGATACTCTACCAAC
*
15056 G-GTATCGATACTCTACGAAC
1 GAGTATCGATACTCTACCAAC
15076 GAGTATCGATACTC
1 GAGTATCGATACTC
15090 GCTTTCCCAA
Statistics
Matches: 29, Mismatches: 4, Indels: 2
0.83 0.11 0.06
Matches are distributed among these distances:
20 16 0.55
21 13 0.45
ACGTcount: A:0.27, C:0.25, G:0.20, T:0.27
Consensus pattern (21 bp):
GAGTATCGATACTCTACCAAC
Found at i:16135 original size:20 final size:20
Alignment explanation
Indices: 16106--16143 Score: 58
Period size: 20 Copynumber: 1.9 Consensus size: 20
16096 CAGTACCTAC
*
16106 CCTTGAGTATTGATACTCCA
1 CCTTGAGTATCGATACTCCA
*
16126 CCTTGGGTATCGATACTC
1 CCTTGAGTATCGATACTC
16144 TATAGTAAAT
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
20 16 1.00
ACGTcount: A:0.21, C:0.26, G:0.18, T:0.34
Consensus pattern (20 bp):
CCTTGAGTATCGATACTCCA
Found at i:18056 original size:20 final size:20
Alignment explanation
Indices: 18026--18140 Score: 124
Period size: 20 Copynumber: 5.7 Consensus size: 20
18016 GCCTCTTTAA
18026 GGATACCAACACTCCGGTAT
1 GGATACCAACACTCCGGTAT
** * *
18046 GGATAGTAACACTCTGATAT
1 GGATACCAACACTCCGGTAT
* *
18066 GGATACAAATTCA-TCCAGTAT
1 GGATACCAA--CACTCCGGTAT
18087 GGATACCAACACTCCGGTAT
1 GGATACCAACACTCCGGTAT
* *
18107 CGATACCAACACTCTGGTAT
1 GGATACCAACACTCCGGTAT
*
18127 CGATACCAACACTC
1 GGATACCAACACTC
18141 TAGTATCGAT
Statistics
Matches: 79, Mismatches: 13, Indels: 6
0.81 0.13 0.06
Matches are distributed among these distances:
19 2 0.03
20 62 0.78
21 13 0.16
22 2 0.03
ACGTcount: A:0.33, C:0.27, G:0.17, T:0.23
Consensus pattern (20 bp):
GGATACCAACACTCCGGTAT
Found at i:18141 original size:20 final size:20
Alignment explanation
Indices: 18027--18175 Score: 122
Period size: 20 Copynumber: 7.4 Consensus size: 20
18017 CCTCTTTAAG
*
18027 GATACCAACACTCCGGTATG
1 GATACCAACACTCCGGTATC
** * * *
18047 GATAGTAACACTCTGATATG
1 GATACCAACACTCCGGTATC
* * *
18067 GATACAAATTCA-TCCAGTATG
1 GATACCAA--CACTCCGGTATC
18088 GATACCAACACTCCGGTATC
1 GATACCAACACTCCGGTATC
*
18108 GATACCAACACTCTGGTATC
1 GATACCAACACTCCGGTATC
**
18128 GATACCAACACTCTAGTATC
1 GATACCAACACTCCGGTATC
* * *
18148 GATA-CAAAACCTTCGGTATT
1 GATACCAACA-CTCCGGTATC
18168 GATACCAA
1 GATACCAA
18176 GGGATCGTTA
Statistics
Matches: 105, Mismatches: 19, Indels: 9
0.79 0.14 0.07
Matches are distributed among these distances:
19 6 0.06
20 81 0.77
21 16 0.15
22 2 0.02
ACGTcount: A:0.34, C:0.26, G:0.15, T:0.25
Consensus pattern (20 bp):
GATACCAACACTCCGGTATC
Found at i:24002 original size:20 final size:20
Alignment explanation
Indices: 23979--24069 Score: 85
Period size: 20 Copynumber: 4.5 Consensus size: 20
23969 CCAAGCCTTC
23979 AGTATGGATACCAACACTCT
1 AGTATGGATACCAACACTCT
* * * *
23999 AGTATTGATATCAGTTCATTC-
1 AGTATGGATACCA--ACACTCT
*
24020 GGTATGGATACCAACACTCT
1 AGTATGGATACCAACACTCT
* *
24040 GGTATTGATACCAACACTCT
1 AGTATGGATACCAACACTCT
*
24060 AGTATCGATA
1 AGTATGGATA
24070 TTAAAACCTT
Statistics
Matches: 56, Mismatches: 12, Indels: 6
0.76 0.16 0.08
Matches are distributed among these distances:
19 4 0.07
20 38 0.68
21 10 0.18
22 4 0.07
ACGTcount: A:0.32, C:0.21, G:0.16, T:0.31
Consensus pattern (20 bp):
AGTATGGATACCAACACTCT
Found at i:24085 original size:61 final size:61
Alignment explanation
Indices: 23980--24094 Score: 149
Period size: 61 Copynumber: 1.9 Consensus size: 61
23970 CAAGCCTTCA
* *** *
23980 GTATGGATACCAACACTCTAGTATTGATATCAGTTCATTCGGTATGGATACCAACACTCTG
1 GTATGGATACCAACACTCTAGTATCGATATCAAAACATTCGGTATCGATACCAACACTCTG
* * * *
24041 GTATTGATACCAACACTCTAGTATCGATATTAAAACCTTTGGTATCGATACCAA
1 GTATGGATACCAACACTCTAGTATCGATATCAAAACATTCGGTATCGATACCAA
24095 GGGGCCGATA
Statistics
Matches: 45, Mismatches: 9, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
61 45 1.00
ACGTcount: A:0.32, C:0.21, G:0.16, T:0.31
Consensus pattern (61 bp):
GTATGGATACCAACACTCTAGTATCGATATCAAAACATTCGGTATCGATACCAACACTCTG
Found at i:25953 original size:20 final size:20
Alignment explanation
Indices: 25928--25965 Score: 60
Period size: 20 Copynumber: 1.9 Consensus size: 20
25918 TTTTTAAGTA
25928 AAAGTTTCT-AAACTTTCATC
1 AAAGTTT-TAAAACTTTCATC
25948 AAAGTTTTAAAACTTTCA
1 AAAGTTTTAAAACTTTCA
25966 ATTACAATGA
Statistics
Matches: 17, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
19 1 0.06
20 16 0.94
ACGTcount: A:0.39, C:0.16, G:0.05, T:0.39
Consensus pattern (20 bp):
AAAGTTTTAAAACTTTCATC
Found at i:30904 original size:81 final size:81
Alignment explanation
Indices: 30790--31246 Score: 542
Period size: 81 Copynumber: 5.6 Consensus size: 81
30780 GCATTTACTT
* * * * * * *
30790 TTCATTTAACTTGCATGATTGACCCTTTTCTGCCAAAAGCACAGCTAGGCCATTTATCGTTTACT
1 TTCATCTAACTGGCATAATTGACACATTTCTGCCAAATGCACAGCTAGGCCATTTATCTTTTACT
30855 CAACGGTCTTTAACCG
66 CAACGGTCTTTAACCG
* * *
30871 TTCATCGAACTGGCATAATTGACACATTTCTGCCAAATGTATAGCTAGGCCATTTATCTTTTACT
1 TTCATCTAACTGGCATAATTGACACATTTCTGCCAAATGCACAGCTAGGCCATTTATCTTTTACT
*
30936 CAACGGTCTTTAACCA
66 CAACGGTCTTTAACCG
* * * *
30952 TTCATCTAACTTGCATAATTTGATCA-ACTTTCTTCCAAATACACAGCTA-TCCATTTATCTTCT
1 TTCATCTAACTGGCATAA-TTGA-CACA-TTTCTGCCAAATGCACAGCTAGGCCATTTATCTT-T
* *
31015 T-CTCAACTGTCTTTAACCA
62 TACTCAACGGTCTTTAACCG
* * * * * *
31034 TTCATCTAACTGGTATAATTGATACATTTATACCAAATGCACAACTAGGTCATTTATCTTTTACT
1 TTCATCTAACTGGCATAATTGACACATTTCTGCCAAATGCACAGCTAGGCCATTTATCTTTTACT
31099 CAACGGTCTTTAACCG
66 CAACGGTCTTTAACCG
* * * *
31115 TTCATCTAACTGGTATAATTAACACTTTTCTGCCAAATGCACAGCTAGGCCATTTATCATTTACT
1 TTCATCTAACTGGCATAATTGACACATTTCTGCCAAATGCACAGCTAGGCCATTTATCTTTTACT
*
31180 TAACGGTCTTTAACCG
66 CAACGGTCTTTAACCG
* * * * * * *
31196 TTCATCTAACTGGTATAATTGGCACCTTTTTGTCAATTGCACAGTTAGGCC
1 TTCATCTAACTGGCATAATTGACACATTTCTGCCAAATGCACAGCTAGGCC
31247 TCAAAGGCAC
Statistics
Matches: 323, Mismatches: 46, Indels: 14
0.84 0.12 0.04
Matches are distributed among these distances:
80 20 0.06
81 233 0.72
82 49 0.15
83 21 0.07
ACGTcount: A:0.28, C:0.24, G:0.12, T:0.37
Consensus pattern (81 bp):
TTCATCTAACTGGCATAATTGACACATTTCTGCCAAATGCACAGCTAGGCCATTTATCTTTTACT
CAACGGTCTTTAACCG
Found at i:31031 original size:163 final size:162
Alignment explanation
Indices: 30790--31216 Score: 547
Period size: 163 Copynumber: 2.6 Consensus size: 162
30780 GCATTTACTT
* * * * * *
30790 TTCATTTAACTTGCATGATTGACCCTTTTCTGCCAAA-AGCACAGCTAGGCCATTTATCGTTTAC
1 TTCATCTAACTGGCATAATTAACACTTTTCTGCCAAATA-CACAGCTAGGCCATTTATCATTTAC
* * * * * * *
30854 TCAACGGTCTTTAACCGTTCATCGAACTGGCATAATTGACACATTTCTGCCAAATGTATAGCTAG
65 TCAACGGTCTTTAACCGTTCATCTAACTGGTATAATTGACACATTTATACCAAATGCACAACTAG
30919 GCCATTTATCTTTTACTCAACGGTCTTTAACCA
130 GCCATTTATCTTTTACTCAACGGTCTTTAACCA
* * * *
30952 TTCATCTAACTTGCATAATTTGATCAAC-TTTCTTCCAAATACACAGCTA-TCCATTTATC-TTC
1 TTCATCTAACTGGCATAA-TT-AAC-ACTTTTCTGCCAAATACACAGCTAGGCCATTTATCATT-
* * * *
31014 TTCTCAACTGTCTTTAACCATTCATCTAACTGGTATAATTGATACATTTATACCAAATGCACAAC
62 TACTCAACGGTCTTTAACCGTTCATCTAACTGGTATAATTGACACATTTATACCAAATGCACAAC
* *
31079 TAGGTCATTTATCTTTTACTCAACGGTCTTTAACCG
127 TAGGCCATTTATCTTTTACTCAACGGTCTTTAACCA
* *
31115 TTCATCTAACTGGTATAATTAACACTTTTCTGCCAAATGCACAGCTAGGCCATTTATCATTTACT
1 TTCATCTAACTGGCATAATTAACACTTTTCTGCCAAATACACAGCTAGGCCATTTATCATTTACT
*
31180 TAACGGTCTTTAACCGTTCATCTAACTGGTATAATTG
66 CAACGGTCTTTAACCGTTCATCTAACTGGTATAATTG
31217 GCACCTTTTT
Statistics
Matches: 227, Mismatches: 30, Indels: 16
0.83 0.11 0.06
Matches are distributed among these distances:
160 2 0.01
161 21 0.09
162 66 0.29
163 117 0.52
164 19 0.08
165 2 0.01
ACGTcount: A:0.28, C:0.24, G:0.11, T:0.37
Consensus pattern (162 bp):
TTCATCTAACTGGCATAATTAACACTTTTCTGCCAAATACACAGCTAGGCCATTTATCATTTACT
CAACGGTCTTTAACCGTTCATCTAACTGGTATAATTGACACATTTATACCAAATGCACAACTAGG
CCATTTATCTTTTACTCAACGGTCTTTAACCA
Found at i:31308 original size:68 final size:68
Alignment explanation
Indices: 31196--31789 Score: 794
Period size: 68 Copynumber: 8.7 Consensus size: 68
31186 TCTTTAACCG
* * *
31196 TTCATCTAACTGGTATAATTGGCACCTTTTTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
1 TTCATCTAACTGGCATAATTGACACCTTTCTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
31261 CCT
66 CCT
* * * *
31264 TTTATCTAACTGGCATAATTGACACCTTCCTGCCAATTGCACAGTTAGGCCTTAAAGGCACTTAG
1 TTCATCTAACTGGCATAATTGACACCTTTCTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
31329 CCT
66 CCT
* ** * * *
31332 TTTATCTAACTCACATAATTGACACGTTTATGTCAAATGCACAGTTAGGCCTCAAAGGCACTTAG
1 TTCATCTAACTGGCATAATTGACACCTTTCTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
31397 CCT
66 CCT
* * *
31400 TTAATCTAACTAGCATAATTGACACCTTTCTGTCAACTGCACAGTTAGGCCTCAAAGGCACTTAG
1 TTCATCTAACTGGCATAATTGACACCTTTCTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
**
31465 AAT
66 CCT
* * *
31468 TTCATCTAATTGGCATAATTGACACCTTTCTGTCAAATGCATAGTTAGGCCTCAAAGGCACTTAG
1 TTCATCTAACTGGCATAATTGACACCTTTCTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
31533 CCT
66 CCT
* * * *
31536 TTCATCTAACTGGCATAATTGACACATTTCTGTCAATTGCACAATTAGGCCTTAAAGACACTTAG
1 TTCATCTAACTGGCATAATTGACACCTTTCTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
31601 CCT
66 CCT
* * *** * *
31604 TTCATCTATA-TGGCATAATTAACACATTTCTGTCAATCAAATAGTTAGGCCTCAAAGGAACTTA
1 TTCATCTA-ACTGGCATAATTGACACCTTTCTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTA
31668 GCCT
65 GCCT
* * * * * *
31672 TTCATCTAACGGGCATAATTGACACCTTTCTATCAATTGCACAATTAGCCCTCAAAGGTAGTTAG
1 TTCATCTAACTGGCATAATTGACACCTTTCTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
**
31737 TAT
66 CCT
* *
31740 TTCATCTAACTGGCATAATTGACACATTTATGTCAATTGCACAGTTAGGC
1 TTCATCTAACTGGCATAATTGACACCTTTCTGTCAATTGCACAGTTAGGC
31790 TATTTTTCTT
Statistics
Matches: 458, Mismatches: 66, Indels: 4
0.87 0.12 0.01
Matches are distributed among these distances:
67 1 0.00
68 456 1.00
69 1 0.00
ACGTcount: A:0.30, C:0.23, G:0.15, T:0.32
Consensus pattern (68 bp):
TTCATCTAACTGGCATAATTGACACCTTTCTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
CCT
Found at i:37155 original size:81 final size:80
Alignment explanation
Indices: 36760--37164 Score: 549
Period size: 81 Copynumber: 5.0 Consensus size: 80
36750 AAAAGTAAAA
* *
36760 CTAGGCCATTTATGTTTTACTCAACGGTCTTTAACCGTTCATCTAACTTGCATAATTGACATCTT
1 CTAGGCCATTTATCTTTTACTCAACGGTCTTTAACCGTTCATCTAACTGGCATAATTGACA-CTT
* *
36825 TCTGCCAAATGCACAA
65 TCTACCAAATGCACAG
* *
36841 CTAGGCCATTTATCTTTTACTCAACGGTCTTTAACCGTTCATCTAATTGGCATAATTAACACTTT
1 CTAGGCCATTTATCTTTTACTCAACGGTCTTTAACCGTTCATCTAACTGGCATAATTGACAC-TT
* *
36906 TCTTCCAAATGCAGAG
65 TCTACCAAATGCACAG
* * *
36922 CTAGGCCATTTATCTTTTACTCAACAGTCTTTAACCTTTCATTTAACTGGCATAATTGACACATT
1 CTAGGCCATTTATCTTTTACTCAACGGTCTTTAACCGTTCATCTAACTGGCATAATTGACAC-TT
* * *
36987 TATGCCAAATGCACAC
65 TCTACCAAATGCACAG
* * * * *
37003 CTAGGTCATTTATCTTTTACTTAACAGTCTTTAACCATTCATCTAACTGGCATAATTCACACCTT
1 CTAGGCCATTTATCTTTTACTCAACGGTCTTTAACCGTTCATCTAACTGGCATAATTGACA-CTT
*
37068 TCTACCAAATACACAG
65 TCTACCAAATGCACAG
* *
37084 CTAGGCCATTTATCATTTACTCAATGGTCTTTAACCGTTCATCTAACTGGCATAATTGACACATT
1 CTAGGCCATTTATCTTTTACTCAACGGTCTTTAACCGTTCATCTAACTGGCATAATTGACAC-TT
* *
37149 TTTACCAATTGCACAG
65 TCTACCAAATGCACAG
37165 TTAAGCCTCA
Statistics
Matches: 285, Mismatches: 36, Indels: 6
0.87 0.11 0.02
Matches are distributed among these distances:
80 2 0.01
81 282 0.99
82 1 0.00
ACGTcount: A:0.29, C:0.24, G:0.11, T:0.36
Consensus pattern (80 bp):
CTAGGCCATTTATCTTTTACTCAACGGTCTTTAACCGTTCATCTAACTGGCATAATTGACACTTT
CTACCAAATGCACAG
Found at i:37212 original size:68 final size:68
Alignment explanation
Indices: 37121--37710 Score: 636
Period size: 68 Copynumber: 8.7 Consensus size: 68
37111 TCTTTAACCG
* * * *
37121 TTCATCTAACTGGCATAATTGACACATTTTTACCAATTGCACAGTTAAGCCTCAAATGCACTTAG
1 TTCATCTAACTGGCATAATTGACACATTTCTATCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
37186 CCT
66 CCT
* * * * * * **
37189 TTCATTTAATTGGCATAATTGACACCTTTATGTCAAATGCACAGTTAGGCCTCAAAGGCACTTTT
1 TTCATCTAACTGGCATAATTGACACATTTCTATCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
37254 CCT
66 CCT
* * **
37257 TTCATCTAACTAGG-ATAATTGATATC-TTTCTATCAACTGCACAGTTAGGCCTCAAAATCACTT
1 TTCATCTAACT-GGCATAATTGACA-CATTTCTATCAATTGCACAGTTAGGCCTCAAAGGCACTT
* *
37320 ATCTT
64 AGCCT
* * * * * *
37325 TTCATCTAACTAGCATAATTGACACATGTCTGTCAAATGCACAATTAGGCCACAAAGGCACTTAG
1 TTCATCTAACTGGCATAATTGACACATTTCTATCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
*
37390 ACT
66 CCT
* * * *
37393 TTCATCTAACTAGAATAATTGACACATTTCTGTCAATTGTACAGTTAGGCCTCAAAGGCACTTAG
1 TTCATCTAACTGGCATAATTGACACATTTCTATCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
37458 CCT
66 CCT
* * ** * * * * * *
37461 TTTATTTAGTTGGCATAATTAACACCTTTCTGTAAAATGCACAGTTAGGCCTCGAAGGCACTTAG
1 TTCATCTAACTGGCATAATTGACACATTTCTATCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
37526 CCT
66 CCT
* * *
37529 TTCATCCAACTGGCATAATTGACATC-TTTCTATCAATTGCATAGATAGGCCTCAAAGGCACTTA
1 TTCATCTAACTGGCATAATTGACA-CATTTCTATCAATTGCACAGTTAGGCCTCAAAGGCACTTA
*
37593 TCCT
65 GCCT
* * * *
37597 TTCATCTAACTGGTATAATTGACACCTTTGTGTCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
1 TTCATCTAACTGGCATAATTGACACATTTCTATCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
37662 CC-
66 CCT
* * * * *
37664 TT--TC-AACTGACATAACTGACACCTTTATGTCAATTGCACAGTTAGGC
1 TTCATCTAACTGGCATAATTGACACATTTCTATCAATTGCACAGTTAGGC
37711 TATTTATCTT
Statistics
Matches: 440, Mismatches: 76, Indels: 16
0.83 0.14 0.03
Matches are distributed among these distances:
64 39 0.09
65 2 0.00
67 5 0.01
68 390 0.89
69 4 0.01
ACGTcount: A:0.30, C:0.23, G:0.14, T:0.33
Consensus pattern (68 bp):
TTCATCTAACTGGCATAATTGACACATTTCTATCAATTGCACAGTTAGGCCTCAAAGGCACTTAG
CCT
Found at i:38416 original size:22 final size:22
Alignment explanation
Indices: 38388--38445 Score: 107
Period size: 22 Copynumber: 2.6 Consensus size: 22
38378 ATCCCCACCC
*
38388 TGGTATCGATACTATTATACTA
1 TGGTATCGATACTATTAGACTA
38410 TGGTATCGATACTATTAGACTA
1 TGGTATCGATACTATTAGACTA
38432 TGGTATCGATACTA
1 TGGTATCGATACTA
38446 CCCTCTTGTA
Statistics
Matches: 35, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
22 35 1.00
ACGTcount: A:0.31, C:0.14, G:0.17, T:0.38
Consensus pattern (22 bp):
TGGTATCGATACTATTAGACTA
Found at i:50089 original size:15 final size:15
Alignment explanation
Indices: 50069--50106 Score: 76
Period size: 15 Copynumber: 2.5 Consensus size: 15
50059 ACTCTTCTAG
50069 TTTGATTTGCAAATC
1 TTTGATTTGCAAATC
50084 TTTGATTTGCAAATC
1 TTTGATTTGCAAATC
50099 TTTGATTT
1 TTTGATTT
50107 TACTTTCAAG
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 23 1.00
ACGTcount: A:0.24, C:0.11, G:0.13, T:0.53
Consensus pattern (15 bp):
TTTGATTTGCAAATC
Found at i:54394 original size:14 final size:14
Alignment explanation
Indices: 54375--54401 Score: 54
Period size: 14 Copynumber: 1.9 Consensus size: 14
54365 CTTTAGCGCC
54375 GTATGTCTGGCACA
1 GTATGTCTGGCACA
54389 GTATGTCTGGCAC
1 GTATGTCTGGCAC
54402 CGTTGGATCA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 13 1.00
ACGTcount: A:0.19, C:0.22, G:0.30, T:0.30
Consensus pattern (14 bp):
GTATGTCTGGCACA
Found at i:57120 original size:18 final size:18
Alignment explanation
Indices: 57094--57164 Score: 97
Period size: 18 Copynumber: 3.8 Consensus size: 18
57084 ATTTTGATTC
*
57094 TTTTGCTTTGCTTTTAAT
1 TTTTCCTTTGCTTTTAAT
*
57112 TTTTCCTTTGCTTTTGATT
1 TTTTCCTTTGCTTTT-AAT
*
57131 CTTTTCCTTTGTTTTTAAT
1 -TTTTCCTTTGCTTTTAAT
57150 TTTTCCTTTGCTTTT
1 TTTTCCTTTGCTTTT
57165 GATTCTTTTC
Statistics
Matches: 46, Mismatches: 5, Indels: 4
0.84 0.09 0.07
Matches are distributed among these distances:
18 28 0.61
19 4 0.09
20 14 0.30
ACGTcount: A:0.07, C:0.15, G:0.08, T:0.69
Consensus pattern (18 bp):
TTTTCCTTTGCTTTTAAT
Found at i:57141 original size:38 final size:38
Alignment explanation
Indices: 57080--57176 Score: 167
Period size: 38 Copynumber: 2.6 Consensus size: 38
57070 TTACTTTGCT
* *
57080 TTTGATTTTGATTCTTTTGCTTTGCTTTTAATTTTTCC
1 TTTGCTTTTGATTCTTTTCCTTTGCTTTTAATTTTTCC
*
57118 TTTGCTTTTGATTCTTTTCCTTTGTTTTTAATTTTTCC
1 TTTGCTTTTGATTCTTTTCCTTTGCTTTTAATTTTTCC
57156 TTTGCTTTTGATTCTTTTCCT
1 TTTGCTTTTGATTCTTTTCCT
57177 GATAGTCTAG
Statistics
Matches: 56, Mismatches: 3, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
38 56 1.00
ACGTcount: A:0.08, C:0.15, G:0.09, T:0.67
Consensus pattern (38 bp):
TTTGCTTTTGATTCTTTTCCTTTGCTTTTAATTTTTCC
Found at i:57175 original size:20 final size:20
Alignment explanation
Indices: 57080--57176 Score: 121
Period size: 20 Copynumber: 5.0 Consensus size: 20
57070 TTACTTTGCT
* *
57080 TTTGATTTTGATTCTTTTGC
1 TTTGCTTTTGATTCTTTTCC
*
57100 TTTGCTTTT-AAT-TTTTCC
1 TTTGCTTTTGATTCTTTTCC
57118 TTTGCTTTTGATTCTTTTCC
1 TTTGCTTTTGATTCTTTTCC
* *
57138 TTTG-TTTTTAAT-TTTTCC
1 TTTGCTTTTGATTCTTTTCC
57156 TTTGCTTTTGATTCTTTTCC
1 TTTGCTTTTGATTCTTTTCC
57176 T
1 T
57177 GATAGTCTAG
Statistics
Matches: 65, Mismatches: 8, Indels: 8
0.80 0.10 0.10
Matches are distributed among these distances:
18 24 0.37
19 16 0.25
20 25 0.38
ACGTcount: A:0.08, C:0.15, G:0.09, T:0.67
Consensus pattern (20 bp):
TTTGCTTTTGATTCTTTTCC
Found at i:59848 original size:15 final size:15
Alignment explanation
Indices: 59830--59862 Score: 57
Period size: 15 Copynumber: 2.2 Consensus size: 15
59820 ATCAAAAAAT
59830 ATAATTTTTATATAA
1 ATAATTTTTATATAA
*
59845 ATAATTTTTATTTAA
1 ATAATTTTTATATAA
59860 ATA
1 ATA
59863 TTTAGAATTT
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 17 1.00
ACGTcount: A:0.45, C:0.00, G:0.00, T:0.55
Consensus pattern (15 bp):
ATAATTTTTATATAA
Found at i:60298 original size:28 final size:28
Alignment explanation
Indices: 60266--60349 Score: 96
Period size: 28 Copynumber: 3.0 Consensus size: 28
60256 GTAATACTCT
* *
60266 ATAATCGAAGCACCATTTTGTAACTTTA
1 ATAATCGAGGAACCATTTTGTAACTTTA
*
60294 ATAATCGAGGAACCAATTTGTAACTTTTA
1 ATAATCGAGGAACCATTTTGTAAC-TTTA
* * * *
60323 AAAATTGAGGGACCATTTTATAACTTT
1 ATAATCGAGGAACCATTTTGTAACTTT
60350 TAGTAGTGAA
Statistics
Matches: 47, Mismatches: 8, Indels: 2
0.82 0.14 0.04
Matches are distributed among these distances:
28 24 0.51
29 23 0.49
ACGTcount: A:0.37, C:0.14, G:0.13, T:0.36
Consensus pattern (28 bp):
ATAATCGAGGAACCATTTTGTAACTTTA
Found at i:60323 original size:29 final size:29
Alignment explanation
Indices: 60266--60351 Score: 102
Period size: 29 Copynumber: 3.0 Consensus size: 29
60256 GTAATACTCT
* *
60266 ATAATCGAAGCACCATTTTGTAAC-TTTA
1 ATAATCGAGGAACCATTTTGTAACTTTTA
*
60294 ATAATCGAGGAACCAATTTGTAACTTTTA
1 ATAATCGAGGAACCATTTTGTAACTTTTA
* * * *
60323 AAAATTGAGGGACCATTTTATAACTTTTA
1 ATAATCGAGGAACCATTTTGTAACTTTTA
60352 GTAGTGAAAG
Statistics
Matches: 49, Mismatches: 8, Indels: 1
0.84 0.14 0.02
Matches are distributed among these distances:
28 21 0.43
29 28 0.57
ACGTcount: A:0.37, C:0.14, G:0.13, T:0.36
Consensus pattern (29 bp):
ATAATCGAGGAACCATTTTGTAACTTTTA
Found at i:61972 original size:20 final size:20
Alignment explanation
Indices: 61887--61977 Score: 71
Period size: 20 Copynumber: 4.5 Consensus size: 20
61877 AAATGACCAA
* *
61887 CAAATTCGCAACGCGAACTC
1 CAAATTCGCAACACGAATTC
* *
61907 CAAATTCGCAACA-TAGTTTC
1 CAAATTCGCAACACGA-ATTC
*
61927 CAATTTCGCAACACGAATT-
1 CAAATTCGCAACACGAATTC
* *
61946 TATAATTCGCAACACAGAAGT-
1 CA-AATTCGCAACAC-GAATTC
61967 CAAATTCGCAA
1 CAAATTCGCAA
61978 AGCGCATTTA
Statistics
Matches: 56, Mismatches: 11, Indels: 8
0.75 0.15 0.11
Matches are distributed among these distances:
19 2 0.04
20 48 0.86
21 6 0.11
ACGTcount: A:0.38, C:0.26, G:0.12, T:0.23
Consensus pattern (20 bp):
CAAATTCGCAACACGAATTC
Found at i:62163 original size:22 final size:22
Alignment explanation
Indices: 62136--62190 Score: 101
Period size: 22 Copynumber: 2.5 Consensus size: 22
62126 GGCGACATCT
62136 GTCCCCATCTCTAACAAAATCC
1 GTCCCCATCTCTAACAAAATCC
*
62158 GTCCCCATCTCTGACAAAATCC
1 GTCCCCATCTCTAACAAAATCC
62180 GTCCCCATCTC
1 GTCCCCATCTC
62191 CGGCGAAATC
Statistics
Matches: 32, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
22 32 1.00
ACGTcount: A:0.25, C:0.44, G:0.07, T:0.24
Consensus pattern (22 bp):
GTCCCCATCTCTAACAAAATCC
Found at i:62199 original size:22 final size:22
Alignment explanation
Indices: 62136--62204 Score: 93
Period size: 22 Copynumber: 3.1 Consensus size: 22
62126 GGCGACATCT
**
62136 GTCCCCATCTCTAACAAAATCC
1 GTCCCCATCTCCGACAAAATCC
*
62158 GTCCCCATCTCTGACAAAATCC
1 GTCCCCATCTCCGACAAAATCC
* *
62180 GTCCCCATCTCCGGCGAAATCC
1 GTCCCCATCTCCGACAAAATCC
62202 GTC
1 GTC
62205 TATCTCCATC
Statistics
Matches: 43, Mismatches: 4, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
22 43 1.00
ACGTcount: A:0.25, C:0.42, G:0.12, T:0.22
Consensus pattern (22 bp):
GTCCCCATCTCCGACAAAATCC
Found at i:62566 original size:20 final size:20
Alignment explanation
Indices: 62543--62581 Score: 69
Period size: 20 Copynumber: 1.9 Consensus size: 20
62533 TTTGAAACTT
*
62543 AAATTCGCAACATGAAAATG
1 AAATTCGCAACACGAAAATG
62563 AAATTCGCAACACGAAAAT
1 AAATTCGCAACACGAAAAT
62582 CGCAACGCGA
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
20 18 1.00
ACGTcount: A:0.51, C:0.18, G:0.13, T:0.18
Consensus pattern (20 bp):
AAATTCGCAACACGAAAATG
Found at i:62584 original size:14 final size:14
Alignment explanation
Indices: 62562--62595 Score: 50
Period size: 14 Copynumber: 2.4 Consensus size: 14
62552 ACATGAAAAT
*
62562 GAAATTCGCAACAC
1 GAAAATCGCAACAC
*
62576 GAAAATCGCAACGC
1 GAAAATCGCAACAC
62590 GAAAAT
1 GAAAAT
62596 GAAAATTGCA
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
14 18 1.00
ACGTcount: A:0.47, C:0.24, G:0.18, T:0.12
Consensus pattern (14 bp):
GAAAATCGCAACAC
Found at i:62594 original size:34 final size:34
Alignment explanation
Indices: 62547--62611 Score: 96
Period size: 34 Copynumber: 1.9 Consensus size: 34
62537 AAACTTAAAT
*
62547 TCGCAACATGAAAATG-AAATTCGCAACACGAAAA
1 TCGCAACACGAAAATGAAAATT-GCAACACGAAAA
*
62581 TCGCAACGCGAAAATGAAAATTGCAACACGA
1 TCGCAACACGAAAATGAAAATTGCAACACGA
62612 TTTTAGTTTC
Statistics
Matches: 28, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
34 23 0.82
35 5 0.18
ACGTcount: A:0.48, C:0.22, G:0.17, T:0.14
Consensus pattern (34 bp):
TCGCAACACGAAAATGAAAATTGCAACACGAAAA
Found at i:64615 original size:21 final size:21
Alignment explanation
Indices: 64587--64705 Score: 105
Period size: 21 Copynumber: 5.7 Consensus size: 21
64577 AATTCACCTG
64587 TCATCGTTCAAGAGACCCCTC
1 TCATCGTTCAAGAGACCCCTC
* * *
64608 TTATCGTTCAAGAGGCCCTTC
1 TCATCGTTCAAGAGACCCCTC
64629 TCATCGTTCAAGA-AGCCCCTC
1 TCATCGTTCAAGAGA-CCCCTC
* * * * *
64650 CCACCGTTCAAGAGGCCCTTG
1 TCATCGTTCAAGAGACCCCTC
* **
64671 TCATCATTCAAGAGGTCCCTC
1 TCATCGTTCAAGAGACCCCTC
* *
64692 CCACCGTTCAAGAG
1 TCATCGTTCAAGAG
64706 CCTGATTCAC
Statistics
Matches: 76, Mismatches: 20, Indels: 4
0.76 0.20 0.04
Matches are distributed among these distances:
21 76 1.00
ACGTcount: A:0.23, C:0.35, G:0.18, T:0.24
Consensus pattern (21 bp):
TCATCGTTCAAGAGACCCCTC
Found at i:64634 original size:42 final size:43
Alignment explanation
Indices: 64587--64705 Score: 163
Period size: 42 Copynumber: 2.8 Consensus size: 43
64577 AATTCACCTG
** *
64587 TCATCGTTCAAGAGA-CCCCTCTTATCGTTCAAGAGGCCCTTC
1 TCATCGTTCAAGAGAGCCCCTCCCACCGTTCAAGAGGCCCTTC
*
64629 TCATCGTTCAAGA-AGCCCCTCCCACCGTTCAAGAGGCCCTTG
1 TCATCGTTCAAGAGAGCCCCTCCCACCGTTCAAGAGGCCCTTC
* *
64671 TCATCATTCAAGAG-GTCCCTCCCACCGTTCAAGAG
1 TCATCGTTCAAGAGAGCCCCTCCCACCGTTCAAGAG
64706 CCTGATTCAC
Statistics
Matches: 69, Mismatches: 6, Indels: 4
0.87 0.08 0.05
Matches are distributed among these distances:
41 1 0.01
42 68 0.99
ACGTcount: A:0.23, C:0.35, G:0.18, T:0.24
Consensus pattern (43 bp):
TCATCGTTCAAGAGAGCCCCTCCCACCGTTCAAGAGGCCCTTC
Found at i:69608 original size:14 final size:15
Alignment explanation
Indices: 69572--69609 Score: 51
Period size: 16 Copynumber: 2.5 Consensus size: 15
69562 GAAATCATTG
69572 AAAAATTATATAGAA
1 AAAAATTATATAGAA
*
69587 ATAAAATTATGTA-AA
1 A-AAAATTATATAGAA
69602 AAAAATTA
1 AAAAATTA
69610 GAGATGGGGA
Statistics
Matches: 21, Mismatches: 1, Indels: 3
0.84 0.04 0.12
Matches are distributed among these distances:
14 7 0.33
15 4 0.19
16 10 0.48
ACGTcount: A:0.66, C:0.00, G:0.05, T:0.29
Consensus pattern (15 bp):
AAAAATTATATAGAA
Found at i:69883 original size:41 final size:41
Alignment explanation
Indices: 69838--69935 Score: 117
Period size: 41 Copynumber: 2.4 Consensus size: 41
69828 TACAAATTAA
* *
69838 GAAATTGAGTTGCGAATTT-CAAATTCAGTGTTACGAATTTG
1 GAAATTGAGTTGCGAATTTGCAAAATC-GCGTTACGAATTTG
* * *
69879 GAAATCGCGTTGCGAATTTGGAAAATCGCGTTACGAATTTG
1 GAAATTGAGTTGCGAATTTGCAAAATCGCGTTACGAATTTG
* *
69920 GAAACTGTGTTGCGAA
1 GAAATTGAGTTGCGAA
69936 ATTGGAGTTC
Statistics
Matches: 48, Mismatches: 8, Indels: 2
0.83 0.14 0.03
Matches are distributed among these distances:
41 43 0.90
42 5 0.10
ACGTcount: A:0.31, C:0.12, G:0.26, T:0.32
Consensus pattern (41 bp):
GAAATTGAGTTGCGAATTTGCAAAATCGCGTTACGAATTTG
Found at i:69896 original size:20 final size:20
Alignment explanation
Indices: 69871--69959 Score: 108
Period size: 20 Copynumber: 4.4 Consensus size: 20
69861 TTCAGTGTTA
69871 CGAATTTGGAAATCGCGTTG
1 CGAATTTGGAAATCGCGTTG
*
69891 CGAATTTGGAAAATCGCGTTA
1 CGAATTTGG-AAATCGCGTTG
*
69912 CGAATTTGGAAA-CTGTGTTG
1 CGAATTTGGAAATC-GCGTTG
* **
69932 CGAAATTGGAGTTCGCGTTG
1 CGAATTTGGAAATCGCGTTG
69952 CGAATTTG
1 CGAATTTG
69960 TTGGTCATTT
Statistics
Matches: 58, Mismatches: 8, Indels: 6
0.81 0.11 0.08
Matches are distributed among these distances:
19 1 0.02
20 37 0.64
21 20 0.34
ACGTcount: A:0.26, C:0.13, G:0.29, T:0.31
Consensus pattern (20 bp):
CGAATTTGGAAATCGCGTTG
Found at i:69941 original size:41 final size:40
Alignment explanation
Indices: 69867--69959 Score: 116
Period size: 41 Copynumber: 2.3 Consensus size: 40
69857 CAAATTCAGT
*
69867 GTTACGAATTTGGAAATCGCGTTGCGAATTTGGAAAATCGC
1 GTTACGAATTTGGAAATCGCGTTGCGAAATTGG-AAATCGC
* **
69908 GTTACGAATTTGGAAA-CTGTGTTGCGAAATTGGAGTTCGC
1 GTTACGAATTTGGAAATC-GCGTTGCGAAATTGGAAATCGC
*
69948 GTTGCGAATTTG
1 GTTACGAATTTG
69960 TTGGTCATTT
Statistics
Matches: 46, Mismatches: 5, Indels: 3
0.85 0.09 0.06
Matches are distributed among these distances:
40 17 0.37
41 29 0.63
ACGTcount: A:0.26, C:0.13, G:0.29, T:0.32
Consensus pattern (40 bp):
GTTACGAATTTGGAAATCGCGTTGCGAAATTGGAAATCGC
Found at i:71580 original size:23 final size:23
Alignment explanation
Indices: 71550--71602 Score: 70
Period size: 23 Copynumber: 2.3 Consensus size: 23
71540 TATTACAAAT
** *
71550 ACAGAGATAAATGTGCCATAAAG
1 ACAGAGATAAACATGACATAAAG
71573 ACAGAGATAAACATGACATAAAG
1 ACAGAGATAAACATGACATAAAG
*
71596 GCAGAGA
1 ACAGAGA
71603 ACATGTCATA
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
23 26 1.00
ACGTcount: A:0.51, C:0.13, G:0.23, T:0.13
Consensus pattern (23 bp):
ACAGAGATAAACATGACATAAAG
Found at i:77304 original size:21 final size:21
Alignment explanation
Indices: 77255--77318 Score: 92
Period size: 21 Copynumber: 3.0 Consensus size: 21
77245 CATATGAAAT
*
77255 TTGTCCCGAAGGACCTGTGAA
1 TTGTCCCGAAGGACCTATGAA
*
77276 TATGTCCCGAAGGACCTATGAG
1 T-TGTCCCGAAGGACCTATGAA
*
77298 TTGTCCCAAAGGACCTATGAA
1 TTGTCCCGAAGGACCTATGAA
77319 ACCCTCGATT
Statistics
Matches: 38, Mismatches: 4, Indels: 2
0.86 0.09 0.05
Matches are distributed among these distances:
21 19 0.50
22 19 0.50
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.23
Consensus pattern (21 bp):
TTGTCCCGAAGGACCTATGAA
Found at i:77611 original size:14 final size:15
Alignment explanation
Indices: 77584--77612 Score: 51
Period size: 14 Copynumber: 2.0 Consensus size: 15
77574 TATATATATA
77584 TCTTATGTTTTATGC
1 TCTTATGTTTTATGC
77599 TCTTATG-TTTATGC
1 TCTTATGTTTTATGC
77613 ATATCATGTA
Statistics
Matches: 14, Mismatches: 0, Indels: 1
0.93 0.00 0.07
Matches are distributed among these distances:
14 7 0.50
15 7 0.50
ACGTcount: A:0.14, C:0.14, G:0.14, T:0.59
Consensus pattern (15 bp):
TCTTATGTTTTATGC
Found at i:83149 original size:20 final size:19
Alignment explanation
Indices: 83097--83157 Score: 68
Period size: 21 Copynumber: 3.0 Consensus size: 19
83087 CATATGAAAT
*
83097 TTGTCCCGAAGGACTGTGA
1 TTGTCCCGAAGGACTATGA
83116 TATGTTCCCGAAGGACTATGA
1 T-TG-TCCCGAAGGACTATGA
*
83137 GTTGTCCCAAAGGACCTATGA
1 -TTGTCCCGAAGGA-CTATGA
83158 AACCCTCGAC
Statistics
Matches: 36, Mismatches: 2, Indels: 6
0.82 0.05 0.14
Matches are distributed among these distances:
19 1 0.03
20 11 0.31
21 23 0.64
22 1 0.03
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (19 bp):
TTGTCCCGAAGGACTATGA
Found at i:83449 original size:14 final size:15
Alignment explanation
Indices: 83422--83450 Score: 51
Period size: 14 Copynumber: 2.0 Consensus size: 15
83412 TATCATATCA
83422 TCTTATGTTTTATGC
1 TCTTATGTTTTATGC
83437 TCTTATG-TTTATGC
1 TCTTATGTTTTATGC
83451 ATATCATGTA
Statistics
Matches: 14, Mismatches: 0, Indels: 1
0.93 0.00 0.07
Matches are distributed among these distances:
14 7 0.50
15 7 0.50
ACGTcount: A:0.14, C:0.14, G:0.14, T:0.59
Consensus pattern (15 bp):
TCTTATGTTTTATGC
Found at i:84452 original size:12 final size:12
Alignment explanation
Indices: 84435--84464 Score: 60
Period size: 12 Copynumber: 2.5 Consensus size: 12
84425 AATCCTCCAA
84435 ATCACTAGACTT
1 ATCACTAGACTT
84447 ATCACTAGACTT
1 ATCACTAGACTT
84459 ATCACT
1 ATCACT
84465 TGATTCTAAT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.33, C:0.27, G:0.07, T:0.33
Consensus pattern (12 bp):
ATCACTAGACTT
Found at i:88949 original size:21 final size:21
Alignment explanation
Indices: 88900--88963 Score: 83
Period size: 22 Copynumber: 3.0 Consensus size: 21
88890 CATATGAAAT
*
88900 TTGTCCCGAAGGACCTGTGAA
1 TTGTCCCGAAGGACCTATGAA
*
88921 TATGTCCCGAAGGACCTATGAG
1 T-TGTCCCGAAGGACCTATGAA
* *
88943 TTGTCCCAAATGACCTATGAA
1 TTGTCCCGAAGGACCTATGAA
88964 ACCCTCGACT
Statistics
Matches: 37, Mismatches: 5, Indels: 2
0.84 0.11 0.05
Matches are distributed among these distances:
21 18 0.49
22 19 0.51
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.25
Consensus pattern (21 bp):
TTGTCCCGAAGGACCTATGAA
Found at i:89263 original size:14 final size:15
Alignment explanation
Indices: 89236--89264 Score: 51
Period size: 14 Copynumber: 2.0 Consensus size: 15
89226 ATATCATATA
89236 TCTTATGTTTTATGC
1 TCTTATGTTTTATGC
89251 TCTTATG-TTTATGC
1 TCTTATGTTTTATGC
89265 ATATCATGTA
Statistics
Matches: 14, Mismatches: 0, Indels: 1
0.93 0.00 0.07
Matches are distributed among these distances:
14 7 0.50
15 7 0.50
ACGTcount: A:0.14, C:0.14, G:0.14, T:0.59
Consensus pattern (15 bp):
TCTTATGTTTTATGC
Found at i:90309 original size:12 final size:12
Alignment explanation
Indices: 90294--90323 Score: 60
Period size: 12 Copynumber: 2.5 Consensus size: 12
90284 TCCTCCATAA
90294 ATCACTAGACTT
1 ATCACTAGACTT
90306 ATCACTAGACTT
1 ATCACTAGACTT
90318 ATCACT
1 ATCACT
90324 TGATTCTAAT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.33, C:0.27, G:0.07, T:0.33
Consensus pattern (12 bp):
ATCACTAGACTT
Found at i:94967 original size:21 final size:21
Alignment explanation
Indices: 94918--94981 Score: 83
Period size: 22 Copynumber: 3.0 Consensus size: 21
94908 CATATGAAAT
*
94918 TTGTCCCGAAGGACCTGTGAA
1 TTGTCCCGAAGGACCTATGAA
*
94939 TATGTCCCGAAGGACCTATGAG
1 T-TGTCCCGAAGGACCTATGAA
* *
94961 TTGTCCCAAATGACCTATGAA
1 TTGTCCCGAAGGACCTATGAA
94982 ACCCTCGACT
Statistics
Matches: 37, Mismatches: 5, Indels: 2
0.84 0.11 0.05
Matches are distributed among these distances:
21 18 0.49
22 19 0.51
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.25
Consensus pattern (21 bp):
TTGTCCCGAAGGACCTATGAA
Found at i:95279 original size:14 final size:15
Alignment explanation
Indices: 95252--95280 Score: 51
Period size: 14 Copynumber: 2.0 Consensus size: 15
95242 ATATCATATA
95252 TCTTATGTTTTATGC
1 TCTTATGTTTTATGC
95267 TCTTATG-TTTATGC
1 TCTTATGTTTTATGC
95281 ATATCATGTA
Statistics
Matches: 14, Mismatches: 0, Indels: 1
0.93 0.00 0.07
Matches are distributed among these distances:
14 7 0.50
15 7 0.50
ACGTcount: A:0.14, C:0.14, G:0.14, T:0.59
Consensus pattern (15 bp):
TCTTATGTTTTATGC
Found at i:96325 original size:12 final size:12
Alignment explanation
Indices: 96310--96339 Score: 60
Period size: 12 Copynumber: 2.5 Consensus size: 12
96300 TCCTCCATAA
96310 ATCACTAGACTT
1 ATCACTAGACTT
96322 ATCACTAGACTT
1 ATCACTAGACTT
96334 ATCACT
1 ATCACT
96340 TGATTCTAAT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.33, C:0.27, G:0.07, T:0.33
Consensus pattern (12 bp):
ATCACTAGACTT
Found at i:101183 original size:14 final size:15
Alignment explanation
Indices: 101166--101236 Score: 67
Period size: 15 Copynumber: 4.7 Consensus size: 15
101156 GAAAATAAAT
101166 ATTA-TATTATAATA
1 ATTATTATTATAATA
*
101180 ATTATTGTATTATAATT
1 ATTA-T-TATTATAATA
101197 ATTATTATTATAA-A
1 ATTATTATTATAATA
* *
101211 ATTATAATTATTATTA
1 ATTATTATTA-TAATA
101227 A-TATTATTAT
1 ATTATTATTAT
101237 TTTACAACGT
Statistics
Matches: 47, Mismatches: 5, Indels: 10
0.76 0.08 0.16
Matches are distributed among these distances:
14 14 0.30
15 17 0.36
16 3 0.06
17 13 0.28
ACGTcount: A:0.44, C:0.00, G:0.01, T:0.55
Consensus pattern (15 bp):
ATTATTATTATAATA
Found at i:101185 original size:17 final size:17
Alignment explanation
Indices: 101159--101236 Score: 74
Period size: 17 Copynumber: 4.7 Consensus size: 17
101149 TTGTCCGGAA
*
101159 AATAAATATTATATTAT
1 AATAATTATTATATTAT
*
101176 AATAATTATTGTATTAT
1 AATAATTATTATATTAT
*
101193 AATTATTA-T-TATTAT
1 AATAATTATTATATTAT
*
101208 AA-AATTATAATTATTATT
1 AATAATTATTA-TATTA-T
101226 AAT-ATTATTAT
1 AATAATTATTAT
101237 TTTACAACGT
Statistics
Matches: 50, Mismatches: 6, Indels: 10
0.76 0.09 0.15
Matches are distributed among these distances:
14 4 0.08
15 8 0.16
16 1 0.02
17 28 0.56
18 9 0.18
ACGTcount: A:0.46, C:0.00, G:0.01, T:0.53
Consensus pattern (17 bp):
AATAATTATTATATTAT
Found at i:101200 original size:3 final size:3
Alignment explanation
Indices: 101165--101237 Score: 53
Period size: 3 Copynumber: 25.3 Consensus size: 3
101155 GGAAAATAAA
* * * * *
101165 TAT TA- TAT TAT AAT AAT TAT T-G TAT TAT AAT TAT TAT TAT TA- TAA
1 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT
* * *
101210 AAT TAT AAT TAT TAT TAA TAT TAT TAT T
1 TAT TAT TAT TAT TAT TAT TAT TAT TAT T
101238 TTACAACGTT
Statistics
Matches: 54, Mismatches: 13, Indels: 6
0.74 0.18 0.08
Matches are distributed among these distances:
2 5 0.09
3 49 0.91
ACGTcount: A:0.42, C:0.00, G:0.01, T:0.56
Consensus pattern (3 bp):
TAT
Found at i:101206 original size:23 final size:23
Alignment explanation
Indices: 101164--101233 Score: 79
Period size: 23 Copynumber: 3.1 Consensus size: 23
101154 CGGAAAATAA
* *
101164 ATATTAT-ATTATAATAATTATT
1 ATATTATAATTATTATTATTATT
* *
101186 GTATTATAATTATTATTATTATA
1 ATATTATAATTATTATTATTATT
* *
101209 AAATTATAATTATTATTAATATT
1 ATATTATAATTATTATTATTATT
101232 AT
1 AT
101234 TATTTTACAA
Statistics
Matches: 38, Mismatches: 9, Indels: 1
0.79 0.19 0.02
Matches are distributed among these distances:
22 6 0.16
23 32 0.84
ACGTcount: A:0.44, C:0.00, G:0.01, T:0.54
Consensus pattern (23 bp):
ATATTATAATTATTATTATTATT
Found at i:104688 original size:21 final size:21
Alignment explanation
Indices: 104663--104718 Score: 85
Period size: 21 Copynumber: 2.6 Consensus size: 21
104653 ACCAAGGACG
104663 AGAAGACCATTCGTAAAGACA
1 AGAAGACCATTCGTAAAGACA
*
104684 AGAAGACCATTCATAAAGACA
1 AGAAGACCATTCGTAAAGACA
*
104705 TGAAGACCACTTCG
1 AGAAGACCA-TTCG
104719 CATTGGAGGT
Statistics
Matches: 31, Mismatches: 3, Indels: 1
0.89 0.09 0.03
Matches are distributed among these distances:
21 28 0.90
22 3 0.10
ACGTcount: A:0.45, C:0.21, G:0.18, T:0.16
Consensus pattern (21 bp):
AGAAGACCATTCGTAAAGACA
Found at i:110473 original size:36 final size:36
Alignment explanation
Indices: 110386--110486 Score: 141
Period size: 37 Copynumber: 2.8 Consensus size: 36
110376 TGGAGCAAAG
110386 TCAATCTTAAGCCTTCACCGAAAAGGAGTGAAGAAAA
1 TCAATCTTAAGCCTTCACC-AAAAGGAGTGAAGAAAA
*
110423 TCAATCTTAAGCCTTCACCAAAGAGGAGTGAAGCAAA
1 TCAATCTTAAGCCTTCACCAAA-AGGAGTGAAGAAAA
* *
110460 -CCATCTTAAGCCTTCACTAAAAAGGAG
1 TCAATCTTAAGCCTTCAC-CAAAAGGAG
110487 GGAATCTGTT
Statistics
Matches: 59, Mismatches: 3, Indels: 5
0.88 0.04 0.07
Matches are distributed among these distances:
36 24 0.41
37 35 0.59
ACGTcount: A:0.41, C:0.22, G:0.18, T:0.20
Consensus pattern (36 bp):
TCAATCTTAAGCCTTCACCAAAAGGAGTGAAGAAAA
Found at i:111614 original size:13 final size:14
Alignment explanation
Indices: 111590--111619 Score: 53
Period size: 13 Copynumber: 2.2 Consensus size: 14
111580 TTTAGTAATT
111590 TTAAGATTTTGAAA
1 TTAAGATTTTGAAA
111604 TTAAG-TTTTGAAA
1 TTAAGATTTTGAAA
111617 TTA
1 TTA
111620 CTCCCCCTTA
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
13 11 0.69
14 5 0.31
ACGTcount: A:0.40, C:0.00, G:0.13, T:0.47
Consensus pattern (14 bp):
TTAAGATTTTGAAA
Found at i:111934 original size:15 final size:15
Alignment explanation
Indices: 111908--111953 Score: 56
Period size: 17 Copynumber: 2.9 Consensus size: 15
111898 TTCAAACATC
111908 CAAACAAATCCAAAGT
1 CAAAC-AATCCAAAGT
*
111924 CTAACAATCCACAAAGT
1 CAAACAAT-C-CAAAGT
111941 CAAACAATCCAAA
1 CAAACAATCCAAA
111954 ATATTCAAAA
Statistics
Matches: 26, Mismatches: 2, Indels: 5
0.79 0.06 0.15
Matches are distributed among these distances:
15 7 0.27
16 6 0.23
17 13 0.50
ACGTcount: A:0.54, C:0.28, G:0.04, T:0.13
Consensus pattern (15 bp):
CAAACAATCCAAAGT
Found at i:111940 original size:17 final size:17
Alignment explanation
Indices: 111918--111951 Score: 59
Period size: 17 Copynumber: 2.0 Consensus size: 17
111908 CAAACAAATC
*
111918 CAAAGTCTAACAATCCA
1 CAAAGTCAAACAATCCA
111935 CAAAGTCAAACAATCCA
1 CAAAGTCAAACAATCCA
111952 AAATATTCAA
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
17 16 1.00
ACGTcount: A:0.50, C:0.29, G:0.06, T:0.15
Consensus pattern (17 bp):
CAAAGTCAAACAATCCA
Found at i:113225 original size:12 final size:12
Alignment explanation
Indices: 113210--113247 Score: 67
Period size: 12 Copynumber: 3.2 Consensus size: 12
113200 TTCAGGAATA
113210 GGAGGAGGATTT
1 GGAGGAGGATTT
113222 GGAGGAGGATTT
1 GGAGGAGGATTT
*
113234 GGAGGTGGATTT
1 GGAGGAGGATTT
113246 GG
1 GG
113248 TTGACGGTGT
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
12 25 1.00
ACGTcount: A:0.21, C:0.00, G:0.53, T:0.26
Consensus pattern (12 bp):
GGAGGAGGATTT
Found at i:113982 original size:23 final size:23
Alignment explanation
Indices: 113952--114013 Score: 124
Period size: 23 Copynumber: 2.7 Consensus size: 23
113942 TTCCCCTGTG
113952 GGGGGAATCGGTTCCCCTTCAAA
1 GGGGGAATCGGTTCCCCTTCAAA
113975 GGGGGAATCGGTTCCCCTTCAAA
1 GGGGGAATCGGTTCCCCTTCAAA
113998 GGGGGAATCGGTTCCC
1 GGGGGAATCGGTTCCC
114014 TCATGGGGGT
Statistics
Matches: 39, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
23 39 1.00
ACGTcount: A:0.19, C:0.26, G:0.34, T:0.21
Consensus pattern (23 bp):
GGGGGAATCGGTTCCCCTTCAAA
Found at i:117382 original size:22 final size:21
Alignment explanation
Indices: 117340--117379 Score: 55
Period size: 21 Copynumber: 1.9 Consensus size: 21
117330 GAGTTTATTT
*
117340 TCATTTTTCAATTTTGAAACA
1 TCATTTTTCAATTTTAAAACA
117361 TCATTTTT-ATATTTTAAAA
1 TCATTTTTCA-ATTTTAAAA
117380 ACAATTTCTC
Statistics
Matches: 17, Mismatches: 1, Indels: 2
0.85 0.05 0.10
Matches are distributed among these distances:
20 1 0.06
21 16 0.94
ACGTcount: A:0.35, C:0.10, G:0.03, T:0.53
Consensus pattern (21 bp):
TCATTTTTCAATTTTAAAACA
Found at i:120375 original size:42 final size:41
Alignment explanation
Indices: 120298--120404 Score: 115
Period size: 42 Copynumber: 2.6 Consensus size: 41
120288 TTCACAATTT
* * * *
120298 ATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATG
1 ATAAATCCTTCGGGCCATCAATAAGCCTTTAGAGCAAGATG
* * **
120339 CTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG
1 -ATAAATCCTTCGGGCCATCAATAAGCCTTTAGAGCAAGATG
* *
120381 ATAAGTCCTTCGGGCCATCCATAA
1 ATAAATCCTTCGGGCCATCAATAA
120405 AACCTTCGGG
Statistics
Matches: 52, Mismatches: 13, Indels: 1
0.79 0.20 0.02
Matches are distributed among these distances:
41 19 0.37
42 33 0.63
ACGTcount: A:0.27, C:0.23, G:0.21, T:0.29
Consensus pattern (41 bp):
ATAAATCCTTCGGGCCATCAATAAGCCTTTAGAGCAAGATG
Found at i:120755 original size:213 final size:213
Alignment explanation
Indices: 119671--132071 Score: 17992
Period size: 214 Copynumber: 58.3 Consensus size: 213
119661 AACAAACCCC
* * * * *
119671 TCAGTAAGTCTTGCGAGCATGATGCTTAAAACCTTCAGGTCATCTGTAACCCTTAAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
119736 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * *
119801 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACAAAGTATGCAATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
*
119866 TTATAAGTCCTTCAGGCCA
195 TTATAAGTCCTTCGGGCCA
* *
119885 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
119950 GGTAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGGAAATAA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTT-GAAA-AT
* * *
120015 AAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGAAGAATGCGATTTTCAAAATTTCACA
128 GAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
120080 ATTTATAAGTCCTTCGGGCCA
193 ATTTATAAGTCCTTCGGGCCA
* * *
120101 TCAGTAAGACTTTCGAGCATGATGCTTAAAACCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
120166 GATAAGTCCTTTGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
*
120231 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATAGAATTCGATTTTCAAAATTTCACAA
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGA-AGAATGCGATTTTCAAAATTTCACAA
120295 TTTATAAGTCCTTCGGGCCA
194 TTTATAAGTCCTTCGGGCCA
*
120315 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
120380 GATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* *
120445 AAAAAATGTTGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
*
120510 ATTTATAAGTCCTTTGGGCCA
193 ATTTATAAGTCCTTCGGGCCA
* * *
120531 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
120596 GATAAGTCCTTCGGGACATCCTAAAACTTTCGGGTTGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * *
120661 AAATGATGTTTTAAGATGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTTAGAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
*
120726 TATATGTCCTTCGGGCCA
196 TATAAGTCCTTCGGGCCA
* * * * * *
120744 TCAGGAAGTCTTTCGAGCATTATGGTTAATTTCTTAGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
120809 GATAAGTCCTTCAGGCCATCTGTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * * *
120874 AAATTGATGTTTTAAGAATATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
120939 TTATAAGTCCTTCGGGCCA
195 TTATAAGTCCTTCGGGCCA
* * *
120958 TCAGTAACTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
121023 GATAAGTCCTTCGGGCCATCCATAAAACCTTCAGGTAGGATATTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
*
121088 AAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGAAGAATGCGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
121153 ATTTATAAGTCCTTCGGGCCA
193 ATTTATAAGTCCTTCGGGCCA
* * * *
121174 TCAGTAAGTC--T---GCATGGTACTTAAATCCATCGGGTCATCTGTAAGCATTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * * *
121234 GATAAGTCCTTCGGGCCAAACATAAGACCTTTGGGTAGGATGTCTTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCC-ATCCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
* *
121298 AAAAAAATGATGTTTTTAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCAC
129 --AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCAC
*
121363 AATTTATAAGTCATTCGGGCCA
192 AATTTATAAGTCCTTCGGGCCA
* * *
121385 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTGGGGTCATCTGTAAGCCTTTAGAGTAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
121450 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* * * * *
121515 AAAAAAGATGTTTTAAGAAGATGAATTTTTTTAAAACTAAGAATGCAATTTTCAAAATTTCACAA
129 AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
121580 TTTATAAGTCCTTCGGGCCA
194 TTTATAAGTCCTTCGGGCCA
* * * * ** * *
121600 TCAATAAGTCTTTCGAGCATGATGATTAAATCCTTCAGGCCATCAATAAGTCTTTAGATCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
121665 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *** *
121730 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAAATGATTTTAAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
121795 TATAAGTCCTTCGGGCCA
196 TATAAGTCCTTCGGGCCA
* * * *
121813 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCCGGTCATCTGTAAGTCATTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
121878 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
121943 AAATGATATTTTAA-AAGATGAAATTTTTGAAAACTAAGAATGCGATTTTGAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
122007 TATAAGTCCTTCGGGCCA
196 TATAAGTCCTTCGGGCCA
* * *
122025 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
122090 GATAAGTCTTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
122155 AAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
122220 TATAAGTCTTTCAGACCA
196 TATAAGTCCTTCGGGCCA
* * * *
122238 TCAGTAAGTCTTTCGAGTATGATGTTTAATTCCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
122303 GATAAGTCCTTCGTGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
122368 AAAATGATGTGTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
*
122433 TTATAAATCCTTCGGGCCA
195 TTATAAGTCCTTCGGGCCA
* * *
122452 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTTATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
122517 GATAAGTCCTTCGGGTCATCTATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* * *
122582 AAAAAATGATGTTTTAAGAAGATG---TTTTAGAGCAATATGAA-AATCGTATTCTTCATTTTCA
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGA--AA-ACGAAGAAT-G----C--GATTTTCA
*
122643 AAAATTCACAATTTATAAGTCCTTCGGGCCA
183 AAATTTCACAATTTATAAGTCCTTCGGGCCA
*
122674 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
122739 GATAAGTCCTTCGGGCTATACCTAAGACCTTTGGGTAGGATGTCTTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
* * * * *
122803 AAAAAAAGATGTTTTAAGAAGATGGAATTTTTGAAAGCAAAGAATGTGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
**
122868 ATTTATAAGTCCTTATGGCCA
193 ATTTATAAGTCCTTCGGGCCA
* *
122889 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
122954 GATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTGAAAATG-
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* *
123018 AAAATG-TGTGTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTGACAA
130 AAAATGATGT-TTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
*
123082 TTTATAAGTCCTTCGGCCCA
194 TTTATAAGTCCTTCGGGCCA
* * * *
123102 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
123167 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
*** *
123232 AAATGATGTTTTAAGAAGATGGGTTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
123297 TAT-AGTCC-TCGGGCCA
196 TATAAGTCCTTCGGGCCA
* * *
123313 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
123378 GATAAGTCTTTC-GGCCATCCTAAAA-CTTCGGGTAGGATGTTTTCACAT-AATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
123440 AAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
123505 TATAAGTCTTTCAGACCA
196 TATAAGTCCTTCGGGCCA
* * * *
123523 TCAGTAAGTCTTTCGAGTATGATGTTTAATTCCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
123588 GATAAGTCCTTCGTGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
123653 AAAATGATGTGTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
*
123718 TTATAAATCCTTCGGGCCA
195 TTATAAGTCCTTCGGGCCA
* * *
123737 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTTATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
123802 GATAAGTCCTTCGGG---TCATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-A
* * * *
123864 AAAATGATG-TTTAAGAAGATG---TTTTAGCAATATGAA-AATCGTATTCTATTTTCAAAA-TT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTG-AAAACGAAGAAT-G----CGATTTTCAAAATTT
123923 CACAATTTATAAGTCCTTCGGGCCA
189 CACAATTTATAAGTCCTTCGGGCCA
*
123948 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
124013 GATAAGTCCTTCGGGCTATACCTAAGACCTTTGGGTAGGATGTCTTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
** * * *
124077 AAAAAAAATGTTTTAAGAAGATGGAA-TTTTGAAAGC-AAGAATGTGA-TTTCAAAATTTCACAA
129 AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
**
124139 TTTATAAGTCCTTATGGCCA
194 TTTATAAGTCCTTCGGGCCA
* *
124159 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCATCTGTAAG-CTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
124223 GATAAGTCCTTCGAGCCATCC-ATAAACCTTCGGGTAGGATGTTTTTACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCCTA-AAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* *
124287 AAAATG-TGTTTTAAGAAGATG-AATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTGACAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
*
124350 TTATAAGTCCTTCGGCCCA
195 TTATAAGTCCTTCGGGCCA
* * * *
124369 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
124434 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
*** *
124499 AAATGATGTTTTAAGAAGATGGGTTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
124564 TATAAGTCCTTCGGGCCA
196 TATAAGTCCTTCGGGCCA
* * * *
124582 TCAATAAGTCTTTCGAGCATGATGCTTAAATCTTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
124647 GATAAGTCCTTCGGGCCATCCTAAAA-CTTCGGGTAGGATGTTTTCAC-T--ATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
124708 GAATGATATTTTAAGAAGATGAAA-TTTTGAAAACGAAGAATGCGATTTTCAAAATTTTACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
124772 TATAAGTCTTTCAGTCCA
196 TATAAGTCCTTCGGGCCA
* * *
124790 TCAGTAAGTCTTTCGAGTATGATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
124855 GATAAGTCCTTCGGGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * *
124920 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
124985 TTATAAGTCCTTCGGGCCA
195 TTATAAGTCCTTCGGGCCA
* *
125004 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
125069 GATAAGTCATTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
*
125134 AAAAATGATGTTTTAAGAAGATGAAA-TTTTGAAAATGAAGAATGCGATTTTCAAAATTTCACAA
129 AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
125198 TTTATAAGTCCTTCGGGCCA
194 TTTATAAGTCCTTCGGGCCA
* * *
125218 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATATGTACGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
125283 GATAAGTCCTTCGGG--AT-ATAAGACCTT-GGGTAGGATGTCTTCA-ATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-A
* * ** * * * *
125343 AAAATGATGCTTTAAGAAGATGGAA-CCTT--CAGCAAAGAATGTGATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
125405 TTATAAGTCCTTCGGGCCA
195 TTATAAGTCCTTCGGGCCA
* *
125424 TCAGTAAGTCTTTCGAGCATTATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * * *
125489 GATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGCTGTTTTTACATGAATTTGAAATTGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * *
125554 AAAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTGACAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
*
125619 TTATAAGTCCTTCGGCCCA
195 TTATAAGTCCTTCGGGCCA
* * ** *
125638 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTTTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
125703 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
125768 AAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
*
125833 TATAAGTCCTTTGGGCCA
196 TATAAGTCCTTCGGGCCA
* * *
125851 TCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * * *
125916 GATAAGTCCTTTGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGTATTTGGAAATAA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAAT-G
* * * *
125981 AAAAATGATGTTTTAAGAAGATGGAGTTTTTAAAAATGAAGAATGCGATTTTCAAAATTTCACAA
129 AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
126046 TTTATAAGTCCTTCGGGCCA
194 TTTATAAGTCCTTCGGGCCA
* * * *
126066 TCAGTAAGACTTTCGAGCATGATGCTTAAAACCTTTGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
126131 GATAAGTCGTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
*
126196 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATAGAATTCGATTTTCAAAATTTCACAA
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGA-AGAATGCGATTTTCAAAATTTCACAA
126260 TTTATAAGTCCTTCGGGCCA
194 TTTATAAGTCCTTCGGGCCA
*
126280 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
126345 GATAAGTCCTTCGGGCCATCTGTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
126410 AAATTGATGTTTTAAGAATATTG-AATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAA
130 AAAATGATGTTTTAAGAAGA-TGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
*
126474 TTTATAAGTCCTTCAGGCCA
194 TTTATAAGTCCTTCGGGCCA
* * * * *
126494 TCAGTAACTCTTTCAAGAATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGGAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
126559 GATAAGTCCTTCGGGCCATCCATAAAACCTTCAGGTAGGATATTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* **
126624 AAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGAAGAATATGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
*
126689 TTTTATAAGTCCTTCGGGCCA
193 ATTTATAAGTCCTTCGGGCCA
* * * *
126710 TCAGTAAGTC--T---GCATGGTACTTAAATCCATCGGGTCATCTGTAAGCATTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * * *
126770 GATAAGTCCTTCGGGCCAAACATAAGACCTTTGGGTAGGATGTCTTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCC-ATCCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
* *
126834 AAAAAAATGTTGGTTTT-AGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCA
129 --AAAAATGAT-GTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCA
* * *
126898 CAATTTATAAGTCATTTGGGCTA
191 CAATTTATAAGTCCTTCGGGCCA
* * * *
126921 TCAGTAAGTCTTCCGAGCATGATGCTTAAAACCTTGGGGTCATCTGTAAGCCTTTAGAGTAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
126986 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * *
127051 AAAATGATGTTTTAAGAAGATGAAATTTTTTAAAACTAAGAATGCAATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
127116 TTATAAGTCCTTCGGGCCA
195 TTATAAGTCCTTCGGGCCA
* * * * *
127135 TCAATAAGTCTTTCGAGCATGATGATTAAATCCTTCAGGTCATCTATAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
127200 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
127265 AAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
*
127330 TATAAGTCCTTCGGGTCA
196 TATAAGTCCTTCGGGCCA
* * * * *
127348 TCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
127413 GATAAGTCTTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
127478 AAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* *
127543 TATAAGT-CTTCAGACCA
196 TATAAGTCCTTCGGGCCA
* * *
127560 TCAGTAAGTCTTTCGAGTATGATG-TTAATTCCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
127624 GATAAGTCCTTCGTGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * *
127689 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
127754 TTATAAGTCCTTCGGGCCA
195 TTATAAGTCCTTCGGGCCA
* * *
127773 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTTATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
127838 GATAAGTCCTTCGGGTCATCTATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* *
127903 AAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGAAGAATACGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
127968 ATTTATAAGTCCTTCGGGCCA
193 ATTTATAAGTCCTTCGGGCCA
*
127989 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * * *
128054 GATAAGTCCTTCGGGCTATACATAAGACCTTTGGGTAGGATGTATTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
* * *
128118 AAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAGA-AAAGAATGTGATTTTCAAAATTTCAC
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAA-ACGAAGAATGCGATTTTCAAAATTTCAC
*
128182 AATTTATAAGTCCTTCGGTCCA
192 AATTTATAAGTCCTTCGGGCCA
* *
128204 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
128269 GATAAGTCCTTCGAGCCATCC-ATAACCTTC-GGTAGGATGTTTTTACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
128332 AAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTGACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
*
128397 TATAAGTCCTTCGGCCCA
196 TATAAGTCCTTCGGGCCA
* * *
128415 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTA-AGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
128479 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
*** *
128544 AAATGATGTTTTAAGAAGATGGGTTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
128609 TATAAGTCCTTCGGGCCA
196 TATAAGTCCTTCGGGCCA
* * * *
128627 TCAATAAGTCTTTCGAGCATGATGCTTAAATCTTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
128692 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * *
128757 GAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTTACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
128822 TATAAGTCTTTCAGTCCA
196 TATAAGTCCTTCGGGCCA
* * *
128840 TCAGTAAGTCTTTCGAGTATGATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
128905 GATAAGTCCTTCGGGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * *
128970 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAAAGAA-AATGC-ATTTTC-AAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
129032 TTATAAGTCCTTCGGGCCA
195 TTATAAGTCCTTCGGGCCA
* *
129051 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
129116 GATAAGTCATTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* *
129181 AAAAAATGATGTTTTAAGAAGATGAAATTTTCGAAAATGAAGAATGCGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
129246 ATTTATAAGTCCTTCGGGCCA
193 ATTTATAAGTCCTTCGGGCCA
* *
129267 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATCTGTACGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * * *
129332 GATAAGTCCTTCGGGCTATACATAAGACCTTTGGGTAGGATGTCTTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
* * ** * * * *
129396 AAAAAATGATGCTTTAAGAAGATGGAA-CCTT--CAGCAAAGAATGTGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
*
129458 ATTTATAAGTCCTTTGGGCCA
193 ATTTATAAGTCCTTCGGGCCA
* *
129479 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATCTGTAATCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * ** * *
129544 GATAAGTCCTTCGAGCCATCC-ATAA-CTTCGGGTAGTCTGTTTTTACATGAATTTGAAATTGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
129607 AAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTGACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
*
129672 TATAAGTCCTTCGGCCCA
196 TATAAGTCCTTCGGGCCA
* * *
129690 TCAATAAGTCTTTCGAGCATTATGCTTAAA-CCATTCGGGTCATCTGTAAGTCTTTA-AGCAAGA
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCC-TTCGGGTCATCTGTAAGCCTTTAGAGCAAGA
*
129753 TGATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATG-ATTTGAAAATG-
65 TGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * *
129816 AAAATGATGTTTTAAGAAGATGGATTTTTTGAAAA-TAAGAATGCGATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
*
129880 TTATAAGTCCTTTGGGCCA
195 TTATAAGTCCTTCGGGCCA
* * * *
129899 TCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * ** *
129964 GATAAGTCCTTTGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGGTAATAA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAAT-G
* * * * *
130029 AAAAATGATGTTTTAAGAAGATG-GAGTTTTAAAAATGAAGAAAGCGATTTTCAAAATTTCACAA
129 AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
130093 TTTATAAGTCCTTCGGGCCA
194 TTTATAAGTCCTTCGGGCCA
* * *
130113 TCA-TAAGACTTTCGAGCATGATGCTTAAAACCTTTGGGT-ATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
130176 GATAAGTCGTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
*
130240 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATAGAATTCGATTTTCAAAATTTCACAA
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGA-AGAATGCGATTTTCAAAATTTCACAA
130304 TTTATAAGTCCTTCGGGCCA
194 TTTATAAGTCCTTCGGGCCA
*
130324 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
130389 GATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* *
130454 AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACGA
129 AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
130519 TTTATAAGTCCTTCGGGCCA
194 TTTATAAGTCCTTCGGGCCA
* * *
130539 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCAT-T-TAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
130602 GATAAGTCCTTCAGGCCATCCTAAAA-CTTC-GGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
130665 AAATGATGTTTTAAG-A-A--AAA-TTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
130725 TATAAGTCCTTCGGGCCA
196 TATAAGTCCTTCGGGCCA
* * *
130743 TCAGGAAGTCTTTCGAGCATGA----TAATTCATTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
130804 GATAAGTCCTTCGGG-CA--ATAAAA-CTTCGGGTAGGATG-TTTCACATGAATTTGAAAATG-A
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * *
130863 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
130928 TATAAGTCCTTC-GGCCA
196 TATAAGTCCTTCGGGCCA
* * *
130945 TCAGTAAGTCTTTCAAGGATGATGCTTAAATCATTCGGGTCATCTGTAAGCCTTTAGAGC---A-
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
131006 -ATAAGTCCTTCGGGCCATCCATAAAACATTCAGGTAGGATATTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
*
131070 AAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGAAGAATGCGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
131135 ATTTATAAGTCCTTCGGGCCA
193 ATTTATAAGTCCTTCGGGCCA
*
131156 TCAGTAAGTCTTTCGAGCATGATACTTAAATCCTTCGGGTCATCTGTAAGCCGTTTAGAGCAAGA
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCC-TTTAGAGCAAGA
* * * *
131221 TGATAAGTCCTTCGGGCCATACATAAGACCTTTGGGTAGGATGTCTTCAC-TGAATTTGAAAATG
65 TGATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG
* * *
131285 AAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGAAGAATGCGATTTTCAAAAGTTCA
129 ---AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCA
* *
131350 CAATTTATAAGTCATTCGGTCCA
191 CAATTTATAAGTCCTTCGGGCCA
* *
131373 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGTAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
131438 GATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGATGTTTT-ACATGAATTTGATAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * *
131502 AAAATGATGTTTTAAGAAGATG--TTTTTTTAAAACTAAGAATGC--TTTTC-AAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
131562 TTATAAGTCCTTCGGG-CA
195 TTATAAGTCCTTCGGGCCA
* * * * * *
131580 --A-TAAGTCTTTCGAGCATGATGCTTAAATCCTTCAGGTAATATATAAGTCTTTAGAGAAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
131642 GATAAGTCCTTCGGGCCATCCTAAAACTTTCTGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
131707 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAAGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
131772 TATAAGTCCTTCGGGCCA
196 TATAAGTCCTTCGGGCCA
* * * * *
131790 TCAATAAGTCTTTCGAGCATGACGCTTAAATCCTTCCGGTCATCTGTAAGTCTTTAGAGCAGGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
131855 GATAAGTCCTTCGGGCTATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
131920 AAATGACGTTTTAA-AAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
*
131984 TATAAGTCCTTCGGGACA
196 TATAAGTCCTTCGGGCCA
* * *
132002 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
132067 GATAA
66 GATAA
132072 CTTGTTTTCA
Statistics
Matches: 11015, Mismatches: 972, Indels: 402
0.89 0.08 0.03
Matches are distributed among these distances:
198 16 0.00
199 30 0.00
200 23 0.00
201 17 0.00
202 60 0.01
203 71 0.01
204 191 0.02
205 8 0.00
206 183 0.02
207 34 0.00
208 337 0.03
209 299 0.03
210 548 0.05
211 1353 0.12
212 1073 0.10
213 2050 0.19
214 2232 0.20
215 953 0.09
216 1166 0.11
217 181 0.02
218 1 0.00
220 1 0.00
221 27 0.00
222 154 0.01
223 1 0.00
224 6 0.00
ACGTcount: A:0.33, C:0.15, G:0.19, T:0.33
Consensus pattern (213 bp):
TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
TATAAGTCCTTCGGGCCA
Found at i:121037 original size:41 final size:42
Alignment explanation
Indices: 120941--121042 Score: 113
Period size: 42 Copynumber: 2.5 Consensus size: 42
120931 TTCATAATTT
120941 ATAAGTCCTTCGGGCCATCAGTAACTCTTTCAAGCATGATGC
1 ATAAGTCCTTCGGGCCATCAGTAACTCTTTCAAGCATGATGC
* * * *
120983 TTAAATCCTTCGGGTCATCTGTAAGC-CTTT-AGAGCAAT-ATG-
1 ATAAGTCCTTCGGGCCATCAGTAA-CTCTTTCA-AGC-ATGATGC
121024 ATAAGTCCTTCGGGCCATC
1 ATAAGTCCTTCGGGCCATC
121043 CATAAAACCT
Statistics
Matches: 50, Mismatches: 7, Indels: 7
0.78 0.11 0.11
Matches are distributed among these distances:
41 17 0.34
42 30 0.60
43 3 0.06
ACGTcount: A:0.25, C:0.25, G:0.20, T:0.30
Consensus pattern (42 bp):
ATAAGTCCTTCGGGCCATCAGTAACTCTTTCAAGCATGATGC
Found at i:121608 original size:20 final size:20
Alignment explanation
Indices: 121583--121651 Score: 59
Period size: 20 Copynumber: 3.4 Consensus size: 20
121573 TTCACAATTT
121583 ATAAGTCCTTCGGGCCATCA
1 ATAAGTCCTTCGGGCCATCA
* * *
121603 ATAAGTCTTTCGAG-CATGA
1 ATAAGTCCTTCGGGCCATCA
* *
121622 TGATTAAATCCTTCAGGCCATCA
1 --A-TAAGTCCTTCGGGCCATCA
121645 ATAAGTC
1 ATAAGTC
121652 TTTAGATCAA
Statistics
Matches: 36, Mismatches: 9, Indels: 8
0.68 0.17 0.15
Matches are distributed among these distances:
19 4 0.11
20 17 0.47
21 2 0.06
22 9 0.25
23 4 0.11
ACGTcount: A:0.30, C:0.23, G:0.17, T:0.29
Consensus pattern (20 bp):
ATAAGTCCTTCGGGCCATCA
Found at i:121647 original size:42 final size:41
Alignment explanation
Indices: 121583--121684 Score: 141
Period size: 42 Copynumber: 2.5 Consensus size: 41
121573 TTCACAATTT
* * *
121583 ATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATG
1 ATAAATCCTTCGGGCCATCAATAAGTCTTTAGAGCAAGATG
* *
121624 ATTAAATCCTTCAGGCCATCAATAAGTCTTTAGATCAAGATG
1 A-TAAATCCTTCGGGCCATCAATAAGTCTTTAGAGCAAGATG
*
121666 ATAAGTCCTTCGGGCCATC
1 ATAAATCCTTCGGGCCATC
121685 CTAAAACTTT
Statistics
Matches: 53, Mismatches: 7, Indels: 2
0.85 0.11 0.03
Matches are distributed among these distances:
41 17 0.32
42 36 0.68
ACGTcount: A:0.29, C:0.23, G:0.19, T:0.29
Consensus pattern (41 bp):
ATAAATCCTTCGGGCCATCAATAAGTCTTTAGAGCAAGATG
Found at i:122117 original size:425 final size:426
Alignment explanation
Indices: 119671--132071 Score: 17933
Period size: 425 Copynumber: 29.2 Consensus size: 426
119661 AACAAACCCC
* * * * *
119671 TCAGTAAGTCTTGCGAGCATGATGCTTAAAACCTTCAGGTCATCTGTAACCCTTAAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
119736 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * *
119801 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACAAAGTATGCAATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAAT
* * *
119866 TTATAAGTCCTTCAGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTTGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* *
119931 TAAGCCTTTAGAGCAAGATGGTAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTT
**
119996 CACATGAATTTGGAAATAAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAA-TGAAGAAT
324 CACATGAATTT-GAAA-ATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACT-AAGAAT
120060 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
386 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
120101 TCAGTAAGACTTTCGAGCATGATGCTTAAAACCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
120166 GATAAGTCCTTTGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
*
120231 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATAGAATTCGATTTTCAAAATTTCACAA
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTA-AGAATGCGATTTTCAAAATTTCACAA
*
120295 TTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
120360 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTT
* *
120425 TCACATGAATTTGAAAATGAAAAAAATGTTGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAAT
323 TCACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAAT
*
120490 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTTGGGCCA
386 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
120531 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
120596 GATAAGTCCTTCGGGACATCCTAAAACTTTCGGGTTGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * * *
120661 AAATGATGTTTTAAGATGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTTAGAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* * * * * * *
120726 TATATGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATTATGGTTAATTTCTTAGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
120791 AAGCCTTTAGAGCAAGATGATAAGTCCTTCAGGCCATCTGTAAAACCTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTC
* * * * *
120856 ACATGAATTTGAAAATGAAAATTGATGTTTTAAGAATATGGAATTTTTGAAAACGAAAAATGCAA
325 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGA
*
120921 TTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
390 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
120958 TCAGTAACTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
121023 GATAAGTCCTTCGGGCCATCCATAAAACCTTCAGGTAGGATATTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
121088 AAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAA-TGAAGAATGCGATTTTCAAAATTTCAC
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATGCGATTTTCAAAATTTCAC
* * *
121152 AATTTATAAGTCCTTCGGGCCATCAGTAAGTC--T---GCATGGTACTTAAATCCATCGGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* * * * *
121212 CTGTAAGCATTTAGAGCAAGATGATAAGTCCTTCGGGCCAAACATAAGACCTTTGGGTAGGATGT
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCC-ATCCTAAAACCTTCGGGTAGGATGT
* * *
121277 CTTCA-ACTGAATTTGAAAATGAAAAAAATGATGTTTTTAGAAGATGGAATTTTTGAAAACGAAG
321 TTTCACA-TGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAG
*
121341 AATGCGATTTTCAAAATTTCACAATTTATAAGTCATTCGGGCCA
383 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
121385 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTGGGGTCATCTGTAAGCCTTTAGAGTAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
121450 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* * * *
121515 AAAAAAGATGTTTTAAGAAGATGAATTTTTTTAAAACTAAGAATGCAATTTTCAAAATTTCACAA
129 AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAA
* * * * *
121580 TTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGATTAAATCCTTCAGGCCATCA
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
* * * *
121645 ATAAGTCTTTAGATCAAGATGATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTT
* ***
121710 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAAATG
324 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCG
*
121775 ATTTTAAAAATTTCACAATTTATAAGTCCTTCGGGCCA
389 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
121813 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCCGGTCATCTGTAAGTCATTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
121878 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
121943 AAATGATATTTTAA-AAGATGAAATTTTTGAAAACTAAGAATGCGATTTTGAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* *
122007 TATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATTTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * *
122072 AAGTCTTTAGAGCAAGATGATAAGTCTTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCA
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCA
* * * * *
122137 CATAAATTTGAAAATGAAAAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGAT
326 CATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGAT
* * *
122202 TTTCAAAATTTCACAATTTATAAGTCTTTCAGACCA
391 TTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
122238 TCAGTAAGTCTTTCGAGTATGATGTTTAATTCCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
122303 GATAAGTCCTTCGTGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * * *
122368 AAAATGATGTGTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAAT
* * *
122433 TTATAAATCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTTATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * * *
122498 TAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCTATAAAACCTTCAGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTT
*
122563 CACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGAT-G--TTTTAGAGCAATA-TGAA-
324 CACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGA--AA-ACT-AAG
* *
122623 AATCGTATTCTTCATTTTCAAAAATTCACAATTTATAAGTCCTTCGGGCCA
383 AAT-G----C--GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
122674 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
122739 GATAAGTCCTTCGGGCTATACCTAAGACCTTTGGGTAGGATGTCTTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
* * * * *
122803 AAAAAAAGATGTTTTAAGAAGATGGAATTTTTGAAAGCAAAGAATGTGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACA
** * *
122868 ATTTATAAGTCCTTATGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCATC
193 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATC
* *
122933 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGATGTT
258 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTT
* *
122998 TTTACATGAATTTGAAAATG-AAAATG-TGTGTTTAAGAAGATGAAATTTTTGAAAACTAAGAAT
322 TTCACATGAATTTGAAAATGAAAAATGATGT-TTTAAGAAGATGGAATTTTTGAAAACTAAGAAT
* *
123061 GCGATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCA
386 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
123102 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
123167 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
***
123232 AAATGATGTTTTAAGAAGATGGGTTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* *
123297 TAT-AGTCC-TCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATTTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
123360 AAGTCTTTAGAGCAAGATGATAAGTCTTTC-GGCCATCCTAAAA-CTTCGGGTAGGATGTTTTCA
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCA
* * * *
123423 CAT-AATTTGAAAATGAAAAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGAT
326 CATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGAT
* * *
123487 TTTCAAAATTTCACAATTTATAAGTCTTTCAGACCA
391 TTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
123523 TCAGTAAGTCTTTCGAGTATGATGTTTAATTCCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
123588 GATAAGTCCTTCGTGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * * *
123653 AAAATGATGTGTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAAT
* * *
123718 TTATAAATCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTTATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * *
123783 TAAGCCTTTAGAGCAATATGATAAGTCCTTCGGG---TCATAAAACCTTCAGGTAGGATGTTTTC
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTC
* *
123845 ACATGAATTTGAAAATGAAAAAATGATG-TTTAAGAAGAT-G--TTTTAGCAATA-TGAA-AATC
325 ACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTG-AAAACT-AAGAAT-
*
123904 GTATTCTATTTTCAAAA-TTCACAATTTATAAGTCCTTCGGGCCA
386 G----CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
123948 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
124013 GATAAGTCCTTCGGGCTATACCTAAGACCTTTGGGTAGGATGTCTTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
** * * *
124077 AAAAAAAATGTTTTAAGAAGATGGAA-TTTTGAAAGC-AAGAATGTGA-TTTCAAAATTTCACAA
129 AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAA
** * *
124139 TTTATAAGTCCTTATGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCATCT
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
*
124204 GTAAG-CTTTAGAGCAAGATGATAAGTCCTTCGAGCCATCC-ATAAACCTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTA-AAACCTTCGGGTAGGATGTTT
*
124267 TTACATGAATTTGAAAATGAAAAATG-TGTTTTAAGAAGAT-GAATTTTTGAAAACTAAGAATGC
323 TCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGC
* *
124330 GATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCA
388 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
124369 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
124434 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
***
124499 AAATGATGTTTTAAGAAGATGGGTTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* * *
124564 TATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCTTTCGGGTCATTTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
*
124629 AAGTCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAA-CTTCGGGTAGGATGTTTTCA
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCA
* * * *
124693 C-T--ATTTGAAAATGAAGAATGATATTTTAAGAAGAT-GAAATTTTGAAAACGAAGAATGCGAT
326 CATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGAT
* * * *
124754 TTTCAAAATTTTACAATTTATAAGTCTTTCAGTCCA
391 TTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
124790 TCAGTAAGTCTTTCGAGTATGATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
124855 GATAAGTCCTTCGGGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
124920 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAAT
*
124985 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * * *
125050 TAAGCCTTTAGAGCAATATGATAAGTCATTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTT
*
125115 CACATGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGAT-GAAATTTTGAAAA-TGAAGAATG
324 CACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACT-AAGAATG
125178 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
387 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
125218 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATATGTACGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
125283 GATAAGTCCTTCGGG--AT-ATAAGACCTT-GGGTAGGATGTCTTCA-ATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-A
* * ** * * * *
125343 AAAATGATGCTTTAAGAAGATGGAA-CCTT--CAGCAAAGAATGTGATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAAT
* *
125405 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATTATGCTTAAAACCTTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * *
125470 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGCTGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTT
* * * *
125535 TACATGAATTTGAAATTGAAAAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
324 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCG
* *
125600 ATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCA
389 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * ** *
125638 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTTTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
125703 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
125768 AAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* * * *
125833 TATAAGTCCTTTGGGCCATCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
125898 AAGCCTTTAGAGCAAGATGATAAGTCCTTTGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTC
* * * * *
125963 ACATGTATTTGGAAATAAAAAAATGATGTTTTAAGAAGATGGAGTTTTT-AAAAATGAAGAATGC
325 ACATGAATTTGAAAAT-GAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACT-AAGAATGC
126027 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
388 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
126066 TCAGTAAGACTTTCGAGCATGATGCTTAAAACCTTTGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
126131 GATAAGTCGTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
*
126196 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATAGAATTCGATTTTCAAAATTTCACAA
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTA-AGAATGCGATTTTCAAAATTTCACAA
*
126260 TTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
*
126325 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCTGTAAAACCTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTT
* * * * *
126390 TCACATGAATTTGAAAATGAAAATTGATGTTTTAAGAATATTGAATTTTTGAAAACGAAAAATGC
323 TCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGC
* * *
126455 AATTTTCAAAATTTCATAATTTATAAGTCCTTCAGGCCA
388 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * * *
126494 TCAGTAACTCTTTCAAGAATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGGAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
126559 GATAAGTCCTTCGGGCCATCCATAAAACCTTCAGGTAGGATATTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
**
126624 AAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAA-TGAAGAATATGATTTTCAAAATTTCAC
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATGCGATTTTCAAAATTTCAC
* * * *
126688 ATTTTATAAGTCCTTCGGGCCATCAGTAAGTC--T---GCATGGTACTTAAATCCATCGGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* * * * *
126748 CTGTAAGCATTTAGAGCAAGATGATAAGTCCTTCGGGCCAAACATAAGACCTTTGGGTAGGATGT
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCC-ATCCTAAAACCTTCGGGTAGGATGT
* * *
126813 CTTCA-ACTGAATTTGAAAATGAAAAAAATGTTGGTTTT-AGAAGATGGAATTTTTGAAAACGAA
321 TTTCACA-TGAATTTGAAAATG--AAAAATGAT-GTTTTAAGAAGATGGAATTTTTGAAAACTAA
* * *
126876 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCATTTGGGCTA
382 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
126921 TCAGTAAGTCTTCCGAGCATGATGCTTAAAACCTTGGGGTCATCTGTAAGCCTTTAGAGTAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
126986 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* *
127051 AAAATGATGTTTTAAGAAGATGAAATTTTTTAAAACTAAGAATGCAATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAAT
* * * *
127116 TTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGATTAAATCCTTCAGGTCATCTA
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* *
127181 TAAGTCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTC
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTC
*
127246 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAGAATGCGA
325 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGA
*
127311 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGTCA
390 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * * *
127348 TCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
127413 GATAAGTCTTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
127478 AAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* * * * *
127543 TATAAGT-CTTCAGACCATCAGTAAGTCTTTCGAGTATGATG-TTAATTCCTTTGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
127606 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGTGCCATCCGTAAAACCTTCGGGTAGAATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTC
* * *
127671 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAA
325 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGA
*
127736 TTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
390 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
127773 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTTATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
127838 GATAAGTCCTTCGGGTCATCTATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
*
127903 AAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAA-TGAAGAATACGATTTTCAAAATTTCAC
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATGCGATTTTCAAAATTTCAC
*
127967 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* * * *
128032 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCTATACATAAGACCTTTGGGTAGGATGT
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGT
* *
128097 ATTCA-ACTGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAGA-AAAG
321 TTTCACA-TGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAA-ACTAAG
* *
128160 AATGTGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGTCCA
383 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
128204 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
128269 GATAAGTCCTTCGAGCCATCC-ATAACCTTC-GGTAGGATGTTTTTACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
128332 AAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTGACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* * *
128397 TATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
128462 AAGTCTTTA-AGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCA
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCA
* **
128526 CATGAGTTTGAAAATGAAAAATGATGTTTTAAGAAGATGGGTTTTTTGAAAACTAAGAATGCGAT
326 CATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGAT
128591 TTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
391 TTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
128627 TCAATAAGTCTTTCGAGCATGATGCTTAAATCTTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
128692 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * * *
128757 GAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTTACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* * * * * *
128822 TATAAGTCTTTCAGTCCATCAGTAAGTCTTTCGAGTATGATGGTTAATTCCTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
*
128887 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCGTAAAACCTTCGGGTAGAATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTC
**
128952 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAAAGAA-AATGC-A
325 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGA
*
129015 TTTTC-AAATTTCATAATTTATAAGTCCTTCGGGCCA
390 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
129051 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
129116 GATAAGTCATTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
*
129181 AAAAAATGATGTTTTAAGAAGATGAAATTTTCGAAAA-TGAAGAATGCGATTTTCAAAATTTCAC
129 -AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATGCGATTTTCAAAATTTCAC
*
129245 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* * * * *
129310 CTGTACGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCTATACATAAGACCTTTGGGTAGGATGT
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGT
* * ** * * *
129375 CTTCA-ACTGAATTTGAAAATGAAAAAATGATGCTTTAAGAAGATGGAA-CCTT--CAGCAAAGA
321 TTTCACA-TGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGA
* *
129436 ATGTGATTTTCAAAATTTCACAATTTATAAGTCCTTTGGGCCA
384 ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
129479 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATCTGTAATCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * ** * *
129544 GATAAGTCCTTCGAGCCATCC-ATAA-CTTCGGGTAGTCTGTTTTTACATGAATTTGAAATTGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
129607 AAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTGACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* * *
129672 TATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATTATGCTTAAA-CCATTCGGGTCATCTG
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCC-TTCGGGTCATCTG
* *
129736 TAAGTCTTTA-AGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTC
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTC
*
129800 ACATG-ATTTGAAAATG-AAAATGATGTTTTAAGAAGATGGATTTTTTGAAAA-TAAGAATGCGA
325 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGA
*
129862 TTTTCAAAATTTCACAATTTATAAGTCCTTTGGGCCA
390 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
129899 TCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * ** *
129964 GATAAGTCCTTTGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGGTAATAA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAAT-G
* * * *
130029 AAAAATGATGTTTTAAGAAGATG-GAGTTTT-AAAAATGAAGAAAGCGATTTTCAAAATTTCACA
129 AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATGCGATTTTCAAAATTTCACA
* * *
130092 ATTTATAAGTCCTTCGGGCCATCA-TAAGACTTTCGAGCATGATGCTTAAAACCTTTGGGT-ATC
193 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATC
* *
130155 TGTAAGCCTTTAGAGCAAGATGATAAGTCGTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTT
258 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTT
*
130220 TTCACATGAATTTGAAAATG-AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATAGAAT
322 TTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTA-AGAAT
*
130283 TCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
386 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
130324 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
130389 GATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* * *
130454 AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACGA
129 AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAA
* *
130519 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCAT-T
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
* *
130583 -TAAGTCTTTAGAGCAAGATGATAAGTCCTTCAGGCCATCCTAAAA-CTTC-GGTAGGATGTTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTT
* *
130645 CACATAAATTTGAAAATGAAAAATGATGTTTTAAGAA-A---AA-TTTTGAAAACGAAGAATGCG
324 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCG
130705 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
389 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
130743 TCAGGAAGTCTTTCGAGCATGA----TAATTCATTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
130804 GATAAGTCCTTCGGG-CA--ATAAAA-CTTCGGGTAGGATG-TTTCACATGAATTTGAAAATG-A
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * * *
130863 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* * *
130928 TATAAGTCCTTC-GGCCATCAGTAAGTCTTTCAAGGATGATGCTTAAATCATTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * *
130992 AAGCCTTTAGAGC---A--ATAAGTCCTTCGGGCCATCCATAAAACATTCAGGTAGGATATTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTC
*
131052 ACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAA-TGAAGAATG
325 ACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACT-AAGAATG
131116 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
387 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
131156 TCAGTAAGTCTTTCGAGCATGATACTTAAATCCTTCGGGTCATCTGTAAGCCGTTTAGAGCAAGA
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCC-TTTAGAGCAAGA
* * * *
131221 TGATAAGTCCTTCGGGCCATACATAAGACCTTTGGGTAGGATGTCTTCAC-TGAATTTGAAAATG
65 TGATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG
* *
131285 AAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAA-TGAAGAATGCGATTTTCAAAAGTTC
129 ---AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATGCGATTTTCAAAATTTC
* * *
131349 ACAATTTATAAGTCATTCGGTCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTC
190 ACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTC
* * *
131414 ATCTGTAAGCCTTTAGAGTAAGATGATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGAT
255 ATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGAT
* * *
131479 GTTTT-ACATGAATTTGATAATGAAAAATGATGTTTTAAGAAGAT-G-TTTTTTTAAAACTAAGA
319 GTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGA
131541 ATGC--TTTTC-AAATTTCACAATTTATAAGTCCTTCGGG-CA
384 ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * * * *
131580 --A-TAAGTCTTTCGAGCATGATGCTTAAATCCTTCAGGTAATATATAAGTCTTTAGAGAAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
131642 GATAAGTCCTTCGGGCCATCCTAAAACTTTCTGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
*
131707 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAAGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
* * *
131772 TATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGACGCTTAAATCCTTCCGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * * *
131837 AAGTCTTTAGAGCAGGATGATAAGTCCTTCGGGCTATCCTAAAACTTTCGGGTAGGATGTTTTCA
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCA
* *
131902 CATGAATTTGAAAATGAAAAATGACGTTTTAA-AAGATGAAATTTTTGAAAACTAAGAATGCGAT
326 CATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGAT
*
131966 TTTCAAAATTTCACAATTTATAAGTCCTTCGGGACA
391 TTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
132002 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
132067 GATAA
66 GATAA
132072 CTTGTTTTCA
Statistics
Matches: 10774, Mismatches: 972, Indels: 455
0.88 0.08 0.04
Matches are distributed among these distances:
403 19 0.00
404 5 0.00
405 4 0.00
406 72 0.01
407 75 0.01
408 32 0.00
409 22 0.00
410 14 0.00
411 5 0.00
412 2 0.00
413 77 0.01
414 2 0.00
415 52 0.00
416 27 0.00
417 210 0.02
418 71 0.01
419 123 0.01
420 577 0.05
421 579 0.05
422 528 0.05
423 664 0.06
424 644 0.06
425 1583 0.15
426 660 0.06
427 1469 0.14
428 1152 0.11
429 565 0.05
430 892 0.08
431 214 0.02
432 17 0.00
433 43 0.00
434 22 0.00
435 7 0.00
436 147 0.01
437 199 0.02
ACGTcount: A:0.33, C:0.15, G:0.19, T:0.33
Consensus pattern (426 bp):
TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCA
CATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACTAAGAATGCGAT
TTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
Found at i:125917 original size:42 final size:41
Alignment explanation
Indices: 125834--125935 Score: 105
Period size: 42 Copynumber: 2.5 Consensus size: 41
125824 TTCACAATTT
* * ** * * *
125834 ATAAGTCCTTTGGGCCATCAATAAGTCTTTCGAGCATGATG
1 ATAAATCCTTCGGGCCATCTGTAAGCCTTTAGAGCAAGATG
*
125875 ATGAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG
1 AT-AAATCCTTCGGGCCATCTGTAAGCCTTTAGAGCAAGATG
* *
125917 ATAAGTCCTTTGGGCCATC
1 ATAAATCCTTCGGGCCATC
125936 CATAAGACCT
Statistics
Matches: 49, Mismatches: 11, Indels: 2
0.79 0.18 0.03
Matches are distributed among these distances:
41 16 0.33
42 33 0.67
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (41 bp):
ATAAATCCTTCGGGCCATCTGTAAGCCTTTAGAGCAAGATG
Found at i:126365 original size:41 final size:42
Alignment explanation
Indices: 126263--126369 Score: 135
Period size: 42 Copynumber: 2.6 Consensus size: 42
126253 TTCACAATTT
** * * *
126263 ATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGC
1 ATAAGTCCTTCGGGCCATCTGTAAGCCTTTAGAGCAAGATGC
* * *
126305 TTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG-
1 ATAAGTCCTTCGGGCCATCTGTAAGCCTTTAGAGCAAGATGC
126346 ATAAGTCCTTCGGGCCATCTGTAA
1 ATAAGTCCTTCGGGCCATCTGTAA
126370 AACCTTCGGG
Statistics
Matches: 54, Mismatches: 11, Indels: 1
0.82 0.17 0.02
Matches are distributed among these distances:
41 21 0.39
42 33 0.61
ACGTcount: A:0.26, C:0.22, G:0.21, T:0.30
Consensus pattern (42 bp):
ATAAGTCCTTCGGGCCATCTGTAAGCCTTTAGAGCAAGATGC
Found at i:127184 original size:42 final size:41
Alignment explanation
Indices: 127118--127219 Score: 123
Period size: 42 Copynumber: 2.5 Consensus size: 41
127108 TTCACAATTT
* * * *
127118 ATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATG
1 ATAAATCCTTCAGGCCATCAATAAGTCTTTAGAGCAAGATG
* *
127159 ATTAAATCCTTCAGGTCATCTATAAGTCTTTAGAGCAAGATG
1 A-TAAATCCTTCAGGCCATCAATAAGTCTTTAGAGCAAGATG
* *
127201 ATAAGTCCTTCGGGCCATC
1 ATAAATCCTTCAGGCCATC
127220 CTAAAACTTT
Statistics
Matches: 51, Mismatches: 9, Indels: 2
0.82 0.15 0.03
Matches are distributed among these distances:
41 16 0.31
42 35 0.69
ACGTcount: A:0.28, C:0.22, G:0.20, T:0.30
Consensus pattern (41 bp):
ATAAATCCTTCAGGCCATCAATAAGTCTTTAGAGCAAGATG
Found at i:127398 original size:42 final size:42
Alignment explanation
Indices: 127336--127432 Score: 115
Period size: 42 Copynumber: 2.3 Consensus size: 42
127326 AATTTATAAG
* *
127336 TCCTTCGGGTCATCAATAAGTCTTTCGAGCATGATGATGAAA
1 TCCTTCGGGTCATCAATAAGTCTTTAGAGCAAGATGATGAAA
*** *
127378 TCCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGATGAT-AAG
1 TCCTTCGGGTCATCAATAAGTCTTTAGAGCAAGATGATGAAA
* *
127419 TCTTTCGGGCCATC
1 TCCTTCGGGTCATC
127433 CTAAAACTTT
Statistics
Matches: 46, Mismatches: 9, Indels: 1
0.82 0.16 0.02
Matches are distributed among these distances:
41 13 0.28
42 33 0.72
ACGTcount: A:0.25, C:0.20, G:0.23, T:0.33
Consensus pattern (42 bp):
TCCTTCGGGTCATCAATAAGTCTTTAGAGCAAGATGATGAAA
Found at i:130384 original size:42 final size:41
Alignment explanation
Indices: 130307--130413 Score: 115
Period size: 42 Copynumber: 2.6 Consensus size: 41
130297 TTCACAATTT
* * * *
130307 ATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATG
1 ATAAATCCTTCGGGCCATCAATAAGCCTTTAGAGCAAGATG
* * **
130348 CTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG
1 -ATAAATCCTTCGGGCCATCAATAAGCCTTTAGAGCAAGATG
* *
130390 ATAAGTCCTTCGGGCCATCCATAA
1 ATAAATCCTTCGGGCCATCAATAA
130414 AACCTTCGGG
Statistics
Matches: 52, Mismatches: 13, Indels: 1
0.79 0.20 0.02
Matches are distributed among these distances:
41 19 0.37
42 33 0.63
ACGTcount: A:0.27, C:0.23, G:0.21, T:0.29
Consensus pattern (41 bp):
ATAAATCCTTCGGGCCATCAATAAGCCTTTAGAGCAAGATG
Found at i:130817 original size:41 final size:38
Alignment explanation
Indices: 130726--130819 Score: 98
Period size: 38 Copynumber: 2.4 Consensus size: 38
130716 TTCACAATTT
* *
130726 ATAAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATG
1 ATAAGTCCTTCGGGCCATCAGGAAGCCTTTAGAGCATG
* * * * *
130764 ATAATTCATTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG
1 ATAAGTCCTTCGGGCCATCAGGAAGCCTTTAGAGC---ATG
130805 ATAAGTCCTTCGGGC
1 ATAAGTCCTTCGGGC
130820 AATAAAACTT
Statistics
Matches: 43, Mismatches: 10, Indels: 3
0.77 0.18 0.05
Matches are distributed among these distances:
38 28 0.65
41 15 0.35
ACGTcount: A:0.26, C:0.21, G:0.24, T:0.29
Consensus pattern (38 bp):
ATAAGTCCTTCGGGCCATCAGGAAGCCTTTAGAGCATG
Found at i:131232 original size:42 final size:40
Alignment explanation
Indices: 131138--131253 Score: 117
Period size: 42 Copynumber: 2.8 Consensus size: 40
131128 TTTCACAATT
* * *
131138 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGA
1 TATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGA
* * *
131178 TACTTAAATCCTTCGGGTCATCTGTAAGCCGTTTAGAGCAAGA
1 TA--TAAGTCCTTCGGGCCATCAGTAAGCC-TTTAGAGCAAGA
131221 TGATAAGTCCTTCGGGCCATACA-TAAGACCTTT
1 T-ATAAGTCCTTCGGGCCAT-CAGTAAG-CCTTT
131254 GGGTAGGATG
Statistics
Matches: 61, Mismatches: 9, Indels: 10
0.76 0.11 0.12
Matches are distributed among these distances:
40 2 0.03
42 44 0.72
43 14 0.23
44 1 0.02
ACGTcount: A:0.27, C:0.22, G:0.21, T:0.30
Consensus pattern (40 bp):
TATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGA
Found at i:132197 original size:181 final size:180
Alignment explanation
Indices: 131894--132252 Score: 585
Period size: 181 Copynumber: 2.0 Consensus size: 180
131884 TCGGGTAGGA
* * * * *
131894 TGTTTTCACATGAATTTGAAAATGAAAAATGACGTTTTAAAAGATGAAATTTTTGAAAACTAAGA
1 TGTTTTCACATAAATTTGAAAATGAAAAATGACATTTTAAAAGATAAAAATTTTGAAAACGAAGA
*
131959 ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGACATCAATAAGTCTTTCGAGCATGA
66 ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGACATCAATAAGTCTTTCGAGAATGA
* *
132024 TGCTTAAATCCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGATGATAACT
131 TGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAACT
*
132074 TGTTTTCACATAAATTTGAAAATGAAAAATGATATTTTAAGAAGATAAAAATTTTGAAAACGAAG
1 TGTTTTCACATAAATTTGAAAATGAAAAATGACATTTTAA-AAGATAAAAATTTTGAAAACGAAG
*
132139 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTC-GGACCATCAGTAAGTCTTTCGAGAAT
65 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGA-CATCAATAAGTCTTTCGAGAAT
* *
132203 GATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAA
129 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAA
132253 GTCCTTCGGG
Statistics
Matches: 165, Mismatches: 12, Indels: 3
0.92 0.07 0.02
Matches are distributed among these distances:
180 40 0.24
181 125 0.76
ACGTcount: A:0.36, C:0.13, G:0.17, T:0.34
Consensus pattern (180 bp):
TGTTTTCACATAAATTTGAAAATGAAAAATGACATTTTAAAAGATAAAAATTTTGAAAACGAAGA
ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGACATCAATAAGTCTTTCGAGAATGA
TGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAACT
Found at i:132262 original size:41 final size:42
Alignment explanation
Indices: 132166--132272 Score: 119
Period size: 42 Copynumber: 2.6 Consensus size: 42
132156 TTCACAATTT
* * *
132166 ATAAGTCCTTCGGACCATCAGTAAGTCTTTCGAGAATGATGG
1 ATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAGAATGATGG
* * * *
132208 TTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAA-GAT-G
1 ATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAG-AATGATGG
*
132249 ATAAGTCCTTCGGGCCATCCGTAA
1 ATAAGTCCTTCGGGCCATCAGTAA
132273 AACCTTCGGG
Statistics
Matches: 53, Mismatches: 11, Indels: 3
0.79 0.16 0.04
Matches are distributed among these distances:
41 21 0.40
42 30 0.57
43 2 0.04
ACGTcount: A:0.26, C:0.21, G:0.22, T:0.30
Consensus pattern (42 bp):
ATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAGAATGATGG
Found at i:132443 original size:214 final size:214
Alignment explanation
Indices: 132074--150023 Score: 24688
Period size: 214 Copynumber: 84.0 Consensus size: 214
132064 GATGATAACT
* * ** *
132074 TGTTTTCACATAAATTTGAAAATGAAAAATGATATTTTAAGAAGATAAAAATTTTGAAAACGAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* *
132139 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGACCATCAGTAAGTCTTTCGAGAATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
132204 ATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
132269 GTAAAACCTTCGGGTAGAA
196 ATAAAACCTTCGGGTAGGA
*
132288 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * * *
132353 AATGCAATTTTTAAAATTTCATAGTTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
132418 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
132483 ATAAAACCTTCAGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
132502 TGTTTTCACATGAATTTGAAAAAGAAAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATG
1 TGTTTTCACATGAATTTGAAAATG---AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACG
*
132567 AAGAATGTGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
63 AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
*
132632 ATGATGCTTAAATACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGG-C-
128 ATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCA
* * *
132695 TACATAAGACCTTTGGGTAGGA
193 TCCATAAAACCTTCGGGTAGGA
*
132717 TG---TCAC-TGAATTTGAAAATGAAAAATGATG-TTTAAGAAGATGGAA-TTTTGAAAATGAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* *
132776 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGAGCCATCAGTAATTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
*
132841 ATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTC--GCCAT-C
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
132903 ATAAGACCTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * * *
132922 TGTTTTTACATGAATTTG-AAATG-AAAATG-T-TTTTAAGAAGATGAAATTTTTTAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
132983 AATGCGATTTTCAAAA-TTGACAATTTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * * *
133047 ATGCTTAAATCATTCGGGTCATATGTAAGTCTTTAAAGCAAGATGATAAGTCCTTTGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
133112 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* *
133130 TGTTTTCACATGAGTTTGAAAATG-AAAATGATGTTTTAAGAAGATGG-ATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* *
133193 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATTAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * *
133258 ATGATGAAATCGTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
133323 ATAAGA-CTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
133341 TGTTTTCACATGAATTTGGAAATAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATG-A
1 TGTTTTCACATGAATTTGAAAAT-GAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
*
133405 -AATGCGATTTTCAAAATTT--C-ATTTATAAGT-CTTCGGGCCATCAATAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
133465 GATGCTTAAATCCTTC-GGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTC-GGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
133528 C-T-AAACCTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* *
133546 TGTTTTCACATGAATTTGAAAATGAAAAAATGATGTTTTACGATGATGGAATTTTTGAAAACGAA
1 TGTTTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
** *
133611 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAAACTTTCGAGCAA
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * *
133676 GATGCTTAAAACCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGATGACAAGTCCTTCGGGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
*
133741 CATAAGACCTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* *
133761 TGTTTTCACATGAATTTGAAAATGAAAAATGATG-TTTAAGAAGATGAAATTTTTGAAAAC-TAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* *
133824 AATTCGATTTTCAAAATTTCACAA-TTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
*
133888 ATGCTTAAATCCTTC-GGTCATTTGTAAGCCTTT--AGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
133950 ATAAAACCTTCGGGTAGG-
196 ATAAAACCTTCGGGTAGGA
* *
133968 T-TTTTCACATGAATTTGAAAATGAAAAATGATGTTTTACGATGATGGAATTTTTGAAAACGAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
134032 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
134097 ATGCTTAAAACCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGATGATAAGTCCTTCAGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
134162 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * * *
134180 TGTTTTCACATAAATTTGAAAATGAAAAATGATGTTTTAAGACGATGAAAATTTTGAAAACGAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
*
134245 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * *
134310 ATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG--AAGTCCTTCGGG-CATCT
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
134372 GTAAAACCTTCGGATAGGA
196 ATAAAACCTTCGGGTAGGA
* *
134391 TGTTTTCACATGAATTTGAAAATGAAAATTGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
134456 AATGCAATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
134521 ATGCTTAAATCAGGTAGGATTTCTTAAAACCTTCGGGTCATCTATAAGCC-TT-TAG--AGCA--
131 ATGC-T---T-A---A--A-----T----CCTTCGGGTCATCTGTAAGCCTTTAGAGCAAG-ATG
* ** * * * * *
134580 ATATGATAAGTCCTTCGGGTCATCGATAAAACCTTCAGGTAGGA
176 ATAAG-T-CCTTC-G--GGCCATCCATAAAACCTTCGGGTAGGA
* * * *
134624 TGTTTTCACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAAAAGAAATTTTTGAAAATGA
1 TGTTTTCACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA
134689 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
64 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
* * * * *
134754 TGATGCTTAAATACTTCAGGTCATATTTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCTAT
129 TGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT
* * *
134819 ACATAAGACCTTTGGGTAGGA
194 CCATAAAACCTTCGGGTAGGA
* *
134840 TGTCTT--C---AA--TGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGAA
1 TGTTTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
*
134898 GAATGCGATTTTCAAAATTTCTCAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * * *
134963 GATGCTTAAAACCTTTGGGTCTTCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
* *
135028 CATAAGACCTTCGGGTATGA
195 CATAAAACCTTCGGGTAGGA
* * * *
135048 TGTTTTTACATTAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * * *
135113 AATACGATTTTCAAAATTTGACAATTTATAAGTCCTTTGGCCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
135178 ATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGATGAAAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
135243 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
135261 TGTTTTCACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAATATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
135326 AATGCAATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
135391 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
135456 ATAAAACCTTCAGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
135475 TGTTTTCACATGAATTTGAAAATGAAAAAAAAAAGATGTTTTAAGAAGATGAAATTTTTGAAAAT
1 TGTTTTCACATGAATTTGAAAATG----AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAAC
135540 GAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAG
62 GAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAG
* *
135605 CATGATGCTTAAATACTTCGGGTCATCTGTAAGCC-TTAGAGCAAGATGATAAGTCCTTCGGGCT
127 CATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCC
* *
135669 ATACATAAGACCTT-GGGTAGGA
192 ATCCATAAAACCTTCGGGTAGGA
* *
135691 TGTCTTCA-ACTGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGA
1 TGTTTTCACA-TGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA
* * *
135755 AGAATGCGACTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAATTCTTTAGAGCA
64 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
* *
135820 TGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCAT
129 TGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT
*
135885 CCATAAGACCTTCGGGTAGGA
194 CCATAAAACCTTCGGGTAGGA
* * * * *
135906 TGTTTTTACATGAGTTTGAAAATGAAAAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * *
135971 AATGTGATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * * *
136036 ATGCTTAAATCATTCGGGTCATATGTAAGTCTTTAAAGCAAGATGATAAGTCCTTCAGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
136101 -TAAAACTTTCGGGT---A
196 ATAAAACCTTCGGGTAGGA
* * *
136116 -GTTTTCACATG-A-GTG-AAATGAAAAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* *
136177 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGTCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
136242 ATGATGAAATCCTTCAGGTCATCTATAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
136307 ATAAAACCTTTGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* *
136326 TGTTTTCACATGAATTTGAAAATGAAAAAATGATGTTTTACGATGATGGAATTTTTGAAAACGAA
1 TGTTTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
136391 GAATGCGATTTTCAAAATTTCACAATTTATAA-TCC-TCGGGCCATCAGTAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * * *
136454 GATGCTTAAAACCTTTGGGTCAT-TGTAAGTCTTTAGAGC---ATGATAAGTCCTTCAGGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
*
136515 C-TAAAACTTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* * *
136534 TGTTTTCACAT-AATTTGAAAATGAAAAATGATGTTTT-A-ACGATGAAAAATTTTGAAAACGAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATG-GAATTTTTGAAAACGAA
*
136596 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * **
136661 GATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGAAATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
** *
136726 TGTAAAACCTTCGGATAGGA
195 CATAAAACCTTCGGGTAGGA
* * *
136746 TGTTTTCACATGAATTTGAAAATGAAAATTGATGTTTTAAGAAGCTGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
136811 AATGCAATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
** * * * * *
136876 ATGCTTAAATCAGGTAGGAT-TTCT-TAAAACCTTCGGGTCATCTGTAAGCCTTTAGA-GCAATA
131 ATGCTTAAATC-CTTCGGGTCATCTGT-AAGCCTT----T-A---G--AG-C--AAGATG--ATA
* ** * * * * *
136938 TGATAAGTCCTTCGGGTCATCGATAAAACCTTCAGGTAGGA
179 AG-T-CCTTC-G--GGCCATCCATAAAACCTTCGGGTAGGA
** * *
136979 TGTTTTCACATGAATTTGAAAATGAAAAAATGATGTTTTAAGAA-AAAGAAATTTTGAAAATGAA
1 TGTTTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
*
137043 GAATGCGATTTTCAAAATTTCACAA-TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCG-GAAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * * * *
137106 GATGCTTAAATACTTCAGGTCATATGTAAGCCTTT--AGCAAGATGATAAGTCCTTCGGGCTATA
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
* *
137169 CAT-AGACCTTTGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* *
137188 TGTCTTCA-ATG-A----AAAA--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
*
137245 AATGCGA-TTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCTGTAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
137309 ATGCTTAAAACCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTTGAGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* * *
137374 ATAAGACCTTCAGGTATGA
196 ATAAAACCTTCGGGTAGGA
* * *
137393 TGTTTTTACATGAATTTGAAAATGAAAAATGATG-TTTAAGAAGAT-GAAATTTTGAAAA-TAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * *
137455 AATACGATTTTCAAAA-TTGACAATTTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * *
137519 ATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
137584 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
137602 TGTTTTCACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAATATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
137667 AATGCAATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
137732 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
137797 ATAAAACCTTCAGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
137816 TGTTTTCACATGAATTTGAAAATGAAAAAAAAAGATGTTTTAAGAAGATGAAATTTTTGAAAATG
1 TGTTTTCACATGAATTTGAAAATG---AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACG
*
137881 AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAATTCTTTCGAGC
63 AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
* * *
137946 ATGATGCTTAAAACCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCA
128 ATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCA
*
138011 TCCATAAGACCTTCGGGTAGGA
193 TCCATAAAACCTTCGGGTAGGA
* * * * *
138033 TGTTTTTACATGAGTTTGAAAATGAAAAATGCTGTTTTAAGAAGATGAAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * *
138098 AATGTGATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * **
138163 ATGCTTAAATCATTCGGGTCATTTGTAAGTCTTTAGAGCAAGATGATAAGTCCTTCAAGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
138228 -TAAAACTTTCGGGTAAGA
196 ATAAAACCTTCGGGTAGGA
* * *
138246 TGTTTTCACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
*
138311 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * *
138376 ATGATGAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCAGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
138441 ATAAGACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * * * * *
138460 TGTTTTCACATGAATTTGGAAATAAAAAATGATGTTTTAAAAAGATGAAAGTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* *
138525 AATGAGATTTTCAAAATTTCACAATTGATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
*
138590 ATGCTTAAATCCTTCGGGTCATCTGTAAACCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
138655 ATAAAACCTTCAGGTAGGG
196 ATAAAACCTTCGGGTAGGA
* * * *
138674 TGTTTTCACATAAATCTGAAAATGAAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTA
1 TGTTTTCACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA
* * *
138739 AGGATGC-ATTTTAAAAATTTCACAATTTATAAGTCCTTCGGACCATCAGTAAGTCTTTCGAGCA
64 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
* * *
138803 TGATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTGGGGCCAT
129 TGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT
* * *
138868 CCGTAAAACATTCGGGTAGAA
194 CCATAAAACCTTCGGGTAGGA
* *
138889 TGTTTTCACATGAATTTGAAAATGAAAAATGACGTTTTAAGAAGATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * * *
138954 AATGCAATTTTCAAAATTTTATAATTTATAAGTCCTTCAGGCCATCAGTAAGTCTTTCAAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
139019 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
139084 ATAAAACCTTCAGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* *
139103 TGTTTTCACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGA
1 TGTTTTCACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA
*
139168 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGACCA
64 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
* **
139233 TGATGCTTAAATACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGATAT
129 TGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT
* * * *
139298 GCATTAGACCTTTGGGTAGGA
194 CCATAAAACCTTCGGGTAGGA
* *
139319 TGTCTTCA-ACTGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGA
1 TGTTTTCACA-TGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA
*
139383 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAATTCTTTCGAGCA
64 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
*
139448 TGATGCTT-AA-CCTTC-GGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCAT
129 TGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT
*
139510 CCATAAGACCTTCGGGTAGGA
194 CCATAAAACCTTCGGGTAGGA
* * * * *
139531 GTTTTTTTACATGAATTTGAAAATGAAAAATGTTGTTTTAAGAAGAT-GAAATTTTGAAAACTAA
1 -TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
* *
139595 GAA--CGATTTTCAAAATTTGACAA-TTATAAGTCCTTC-GGCCATCAATAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * *
139656 GATGCTTAAATCATTCGGGTCATCTGTAAGTC-TTAAAGCAAGATGATAAGTCCTTCGGGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
*
139720 C-TAAAACTTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* * *
139739 TGTTTTCACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
*
139804 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * * *
139869 ATGATGAAATCGTTCGGGTCATCTGTAAGCCTTTAGAGGAAAATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
139934 ATAAGACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
139953 TGTTTTCACATGAATTTGGAAATAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGAA
1 TGTTTTCACATGAATTTGAAAAT-GAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
*
140018 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGACTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* *
140083 GATGCTTAAAACCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
*
140148 CATAAGACCTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
*
140168 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA-A
* *
140232 GAATTCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
*
140297 GATGCTTAAATCCTTCCGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
140362 CATAAAACCTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* * *
140382 TGTTTTCACATGAATTTGAAAATGAAAAAATTATGTTTTACGATGATGGAATTTTTGAAAACGAA
1 TGTTTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
140447 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * * * * *
140512 GATGCTTAAAACCTTCGGGTCATTTGTAAGTCTTTAGAGAAAGATGACAAGTCCTTCAGGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
*
140577 C-TAAAACTTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* * * * *
140596 TGTTTTCACATAAATTTGAAAATGAAAAATGATGTTTAAAGACGATGAAAATTTTGAAAACGAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
*
140661 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
140726 ATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCAATCT
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
140791 GTAAAACCTTCGGATAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
140810 TGTTTTCACATGAATTTGAAAATGAAAATTGATGTTTTAAGAAGATGGAATTTTTAAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
140875 AATGCAATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
140940 ATGCTTAAATCATTCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
141005 ATAAAACCTTCAGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* *
141024 TATTTTCACATGAATTTGAAAATGAAAAAAAATGATGTTTTAAGAAGATGAAATTTTTG-AAA--
1 TGTTTTCACATGAATTTGAAAATG---AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACG
*
141086 ATGAATGCGATTTTCAAAATTTCACAA-TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
63 AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
* * *
141150 AAGATACTTAAATCCTTAGGGTCATCTGTAAGCCTTTAGAGCAAGATGAT-AGTCCTTCGGGCCA
128 ATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCA
* *
141214 TACAT--AACCTTTGGGTAGGA
193 TCCATAAAACCTTCGGGTAGGA
*
141234 TGTCTTCA-ATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGGAA-TTTTGAAAACGA
1 TGTTTTCACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA
*
141297 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCATTCGGGCCATCAGTAAGTCTTTCGAGCA
64 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
* *
141362 TGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGTAAGATGATAAGTCCTTCGGGCCAT
129 TGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT
*
141427 CCATAAGACCTTCGGGTAGGA
194 CCATAAAACCTTCGGGTAGGA
* * * * *
141448 TGTTTTTACATGAATTTGATAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTTAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
141513 AATGCAATTTTCAAAATTTCACAAGTTATAAGTCCTTCGGGCCATCAGTAATTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
141578 ATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
141643 ATAAGACCTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
141662 TGTGTTT-ACATGAATTTGAAAATGAAAAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAA
1 TGT-TTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
* * *
141726 GAATGCGATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * *
141791 GATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGATGATAAGTCCTTCGGGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
*
141856 C-TAAAACTTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* * *
141875 TGTTTTCACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
*
141940 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
142005 ATGATGAAATCGTTAGGGTCATCTGTAAGCCTTTAGAGCAA-ATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
142069 ATAAGACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
142088 TGTTTTCACATGAATTTGGAAATAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGAA
1 TGTTTTCACATGAATTTGAAAAT-GAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
*
142153 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGACTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * *
142218 GATGCTTAAAACCTTCAGGTAATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGG-CATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
*
142282 CATAAGA-CTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
*
142301 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTG-AAAC-ATA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA-A
* *
142364 GAATTCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAAT-A-TCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
*
142427 GATGCTTAAATCCTTCCGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
142492 CATAAAACCTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* * *
142512 TGTTTTCACATGAATTTGAAAATGAAAAAATTATGTTTTACGATGATGGAATTTTTGAAAACGAA
1 TGTTTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
*
142577 GAATGCGATTTTCAAAATTTCACAATTTATGAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * * * * *
142642 GATGCTTAAAACCTTCGGGTCATTTGTAAGTCTTTAGAGCACGATGACAAGTCCTTCAGGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
*
142707 C-TAAAACTTTCGGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* * * * *
142726 TGTTTTCACATAAATTTGAAAATGAAAAATGATGTTTAAAGACGATGAAAATTTTGAAAACGAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* *
142791 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCTATCAGGAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
142856 ATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCAATCT
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
142921 GTAAAACCTTCGGATAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
142940 TGCTTTCACATGAATTTGAAAATGAAAATTGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
143005 AATGCAATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCATCAGTAAGTC-TTCAAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
143069 ATGCTTAAAT-CATCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTC-GGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
143132 AT-AAACCTTCAGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
143150 TATTTTCACATGAATTTGAAAATGAAAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATG
1 TGTTTTCACATGAATTTGAAAATG---AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACG
143215 AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
63 AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
* * *
143280 AAGATACTTAAATCCTTAGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCA
128 ATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCA
* * *
143345 TACATAAGACCTTTGGGTAGGA
193 TCCATAAAACCTTCGGGTAGGA
*
143367 TGTCTTCA-ATGAATTTGAAAA--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
*
143429 AATGCGATTTTCAAAATTTCACAATTTATAAGTCATTCGGGCCATCAGTAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * *
143494 ATACTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGTAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
143559 ATAAGACCTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * * * *
143578 TGTTTTTACATGAATTTGATAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTTAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
143643 AATGCAATTTTCAAAATTTCACAAGTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * *
143708 ATGCTTAAATCCTTCAGGTCATCTATAAGTCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
143773 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* *
143791 -GTTTTCACATGAATTTG-AAATG-AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * * *
143853 AAAGCGATTTTAAAAATATCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGTATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
143918 ATGCTTAAATCCTTCCGGTCATCTGTAAGTCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
143983 -TAAAACTTTCGGGCAGGA
196 ATAAAACCTTCGGGTAGGA
* *
144001 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAA-AAGATGAAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
144065 AATTCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGACATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * *
144130 ATGGTTAATTTCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* * *
144195 GTAAAACGTTCGGGTAGAA
196 ATAAAACCTTCGGGTAGGA
*
144214 TG-TTTCACATGAATTTGAAAATGAAAAATGA-GTTTTAAGAAGATGGAA-TTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
** * *
144276 AATGTAATTTTCAAAATTTCATATTTTATAAGTCCTTCGGGCCATCAGTAAGTCTTT-GAAGCAT
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCG-AGCAT
* *
144340 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
* *
144405 GATAAAACCTTCAGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* * * *
144425 TGTTTTCACATGAATTTG-AAATGAAAAAAATGATG-TTTAAGAAAAAGAAATTTTTGAAAATGA
1 TGTTTTCACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA
144488 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
64 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
* * *
144553 TGATGCTTAAATACTTCAGGTCATCTGTAAGCCTTTA-AGCAAGATGATAAGTCCTTCGGGCTAT
129 TGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT
* * *
144617 ACATAAGACCTTTGGGTAGGA
194 CCATAAAACCTTCGGGTAGGA
* *
144638 TGTCTT--C---AA--TGAAAATGAAAAAATGATGTTTTAAGAAGATGGAA-TTTTGAAAATGAA
1 TGTTTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
144695 GAATGCGATTTTCAAAA-TTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* *
144759 GATGCTTAAA-CCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
* *
144823 CATAAGACCTTCGGGTATGA
195 CATAAAACCTTCGGGTAGGA
* *
144843 TGTTTT-ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGA--AAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * *
144905 AATACGATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
144970 ATGCTTAAATCATTCGGGTCATCTGTAAGCCTTTAAAGCAAGATGATAAGTCCTTC-GGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
145034 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* *
145052 TG-TTTCACATGAGTTTGAAAATGAAAAATGATGTTTTAAG-A-ATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
145114 AATGCAATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
145179 ATGCTTAAATCCTTCGGGTCA--TGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
145242 ATAAAACCTTCAGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* *
145261 TGTTTTCACATGAATTTGAAAATGAAAAAAAATGATGTTTTAAGAAGATGAAATTTTT-AAAATG
1 TGTTTTCACATGAATTTGAAAATG---AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACG
145325 AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
63 AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
*
145390 ATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCTA
128 ATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCA
* * *
145455 TACATAAGACCTTTGGGTAGGA
193 TCCATAAAACCTTCGGGTAGGA
* *
145477 TGTCTTCA-ACTGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGA
1 TGTTTTCACA-TGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA
* *
145541 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAATTCTTTCGAGCA
64 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
* * *
145606 TGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGGGTCAAGAGAGCAATGATAGTCCTTCG
129 TGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAG-CAAGA-TG--AT-A-AGTCCTTCG
*
145671 AGCCATCCATAAAACCTTCGGGTAGGA
188 GGCCATCCATAAAACCTTCGGGTAGGA
* * * *
145698 TGTTTTTACATGAATTTGAAAATGAAAAATGCTG-TTTAAGAAGATGAAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* *
145762 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGACCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
145827 ATGCTT--ATCATTC---T--TATGTAAGTCTTTAAAGCAAGATGATAAGGGTCAGTAAGTCTTT
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAA--GTC-------C-TT
** * * * * * **
145885 CAAGCATGATGCTTAAATCATTCGGGTCA-TC
186 CGGGC--CATCCATAAAACCTTCGGGT-AGGA
*** *** * *** **** * ** **
145916 TGTAAGCAGAGCAATATGATAAGTCCTTCGGGCCATCCATAAAACCTTCAGGTAGGATATTTTCA
1 TGTTTTC--A-C---ATG--AA-T--TT--GAAAAT-GA-AAAATGATGTTTTAAGA-AGATGGA
* * * * ** * * *******
145981 CATGAATTTGAAAATGAAAAAAT--GATGTTTAAAAAGATGA-AATTT-TGAAAATGAAGAATGC
50 -AT--TTTTGAAAACG-AAGAATGCGAT-TTTCAAAATTTCACAATTTAT--AAGTCCTTCGGGC
* ** ** * * * *
146042 GAT-TTTCAA-AATTTC-A-CA--AT--TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
108 CATCAGT-AAGTCTTTCGAGCATGATGCTTA-AA-TCCTTCGGGTCATCTGTAAGCCTTTAGAGC
* * * * ** * * ** *
146099 AAGAT-TTAAATCCTTAGGGTCATCTGT-AAGCCTTTAGAGCAATGA
170 AAGATGATAAGTCCTTCGGGCCATCCATAAAACC-TTCG-GGTAGGA
* * ** *** *** * * * *
146144 TAAGTCCTTCGGGCTAT-ACATAAGACCTTCG-GGTAGGATGTCTTCAATGAAAATGAAAAATGA
1 T--GT-TTTC--AC-ATGA-ATTTGAAAAT-GAAAAATGATGT-TTTAA-GAAGATG---GA--A
** * ** * * *
146207 TGTTTTAAGAAGATGGAATTTTGAAAATGAAGAATGCGATTTTCAAAATT-TCACAATTATAAGT
51 T-TTTT--GAA-AACGAA----G--AATG-CG-AT----TTTCAAAATTTCACA-ATTTATAAGT
146271 CCTTC-GGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTT
99 CCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTT
* * *
146335 TAGAGCAAGATGATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTATGA
164 TAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGA
* * * *
146386 TATTTTTACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * *
146451 AATACGATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * *
146516 ATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
146581 -T-AAA-CTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
146597 TGTTTTCACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAATATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* *
146662 AATGCAATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGACTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
146727 ATGCTTAAAACCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGATGACAAGTCCTTCGAGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
146792 ATAAGACCTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
146811 TGTTTTCATATGAATTTGAAAATGAAAAAAAATGATGTTTTATGAAGATGAAATTTTTGAAAAC-
1 TGTTTTCACATGAATTTGAAAATG---AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACG
* *
146875 ATAGAATTCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAG
63 A-AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAG
* *
146940 CATGATGCTTAAATCCTTCCGGTCATCTGTAAGCCTTTAGAGCAAGATGATTAGTCCTTCGGGCC
127 CATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCC
*
147005 ATCC-TAAAACTTTCGGGTAGGA
192 ATCCATAAAACCTTCGGGTAGGA
* * *
147027 TGTTTTCACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAAGTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
147092 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
147157 ATGCTTAAAACCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGATGATAAGTCCTTCAGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
147222 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * * *
147240 TGTTTTCACATAAATTTGAAAATGAAAAATGATGTTTTAAGACGATGAAAATTTTGAAAACGAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
*
147305 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
147370 ATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCAATCT
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
147435 GTAAAACCTTCGGATAGGA
196 ATAAAACCTTCGGGTAGGA
* *
147454 TGTTTTCACATGAATTTGAAAATGAAAATTGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * * * *
147519 AATGCAATTTTCAAATTTTCATAATTTACAAGTCCTTCGGGCCATCAGTAAGTCTTTCAATCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
147584 ATGCTTAAATCATTCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* *
147649 ATAAAACCTTCAGTTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
147668 TATTTTCACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGA
1 TGTTTTCACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA
* *
147733 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCATTTGGGCCATCAGTAAGTCTTTCGAGCA
64 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
* *
147798 TGATACTTAAATCCTTAGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT
129 TGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT
* * * *
147863 ACATAAGACCTTTGGGTATGA
194 CCATAAAACCTTCGGGTAGGA
* *
147884 TG-TCTCA-ACTGAATTTGAAAATTAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACG
1 TGTTTTCACA-TGAATTTGAAAA-T-GAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACG
* *
147947 AAGAATGCAATTTTCAAAATTTCACAATTTATAAGTCATTCGGGCCATCAGTAAGTCTTTCGAGC
63 AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGC
* * *
148012 ATGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGTGTAAGATGATAAGTCCTTCGGGCCA
128 ATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCA
*
148077 TCCATAAGACCTTCGGGTAGGA
193 TCCATAAAACCTTCGGGTAGGA
* * * * *
148099 TGTTTTTACATGAATTTGATAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTTAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
148164 AATGCAATTTTCAAAATTTCACAAGTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * *
148229 ATGCTTAAATCCTTCAGGTCATCTATAAGTCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
148294 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* *
148312 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * ** * *
148377 AAAGCGATTTTAAAAAAATCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGTATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
148442 ATGCTTAAATCCTTCCGGTCATCTGTAAGTCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
148507 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* *
148525 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAA-AAGATGAAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
148589 AATTCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGACATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * * *
148654 ATGCTTAAATCCTTCGGGTCATTTGTATGTCTTTAGAGCAAGATGATAACTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
148719 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * * ** *
148737 TGTTTTCACATAAATTTGAAAATGAAAAACGATATTTTAAGAAGATAAAAATTTTGAAAACGAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* *
148802 AATGCGATTTTCAAAATTTCAGAATTTATAAGTCCTTCGGACCATCAGTAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
148867 ATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
* * *
148932 GTAAAACGTTCGGGTAGAA
196 ATAAAACCTTCGGGTAGGA
*
148951 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
** *
149016 AATGTAATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTT-GAAGCAT
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCG-AGCAT
* *
149080 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
* *
149145 GATAAAACCTTCAGGTAGGA
195 CATAAAACCTTCGGGTAGGA
* * * *
149165 TGTTTTCACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAAAAGAAATTTTTGAAAATGA
1 TGTTTTCACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA
149230 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
64 AGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCA
* * *
149295 TGATGCTTAAATACTTCAGGTCATCTGTAAGCCTTTA-AGCAAGATGATAAGTCCTTCGGGCTAT
129 TGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCAT
* * *
149359 ACATAAGACCTTTGGGTAGGA
194 CCATAAAACCTTCGGGTAGGA
* *
149380 TGTCTT--C---AA--TGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGAA
1 TGTTTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAA
149438 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
65 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAT
* * *
149503 GATGCTTAAAACCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCATC
130 GATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
* *
149568 CATAAGACCTTCGGGTATGA
195 CATAAAACCTTCGGGTAGGA
* * * *
149588 TGTTTTTACATGAATTTGAAAATGAAAAATGATGTCTTAAGAAGATGAAATTTTTGAAAACTAAG
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * * *
149653 AATACGATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* * *
149718 ATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGATGATAAGTCCTTCGGGCCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
149783 -TAAAACTTTCGGGTAGGA
196 ATAAAACCTTCGGGTAGGA
* * *
149801 TGTTTTCACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAATATGGAATTTTTGAAAACGAAA
1 TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
* * *
149866 AATGCAATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATG
66 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
* *
149931 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCC
131 ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
*
149996 ATAAAACCTTC-AGTCCAGGA
196 ATAAAACCTTCGGGT--AGGA
150016 TGTTTTCA
1 TGTTTTCA
150024 TCCAGAATAT
Statistics
Matches: 15805, Mismatches: 1535, Indels: 791
0.87 0.08 0.04
Matches are distributed among these distances:
200 35 0.00
201 58 0.00
202 33 0.00
203 4 0.00
204 57 0.00
205 263 0.02
206 505 0.03
207 466 0.03
208 547 0.03
209 517 0.03
210 621 0.04
211 1299 0.08
212 931 0.06
213 2947 0.19
214 3824 0.24
215 1325 0.08
216 774 0.05
217 604 0.04
218 151 0.01
219 111 0.01
220 18 0.00
221 64 0.00
222 2 0.00
223 4 0.00
224 7 0.00
225 12 0.00
226 15 0.00
227 16 0.00
228 16 0.00
229 12 0.00
230 30 0.00
231 35 0.00
232 37 0.00
233 133 0.01
234 31 0.00
235 118 0.01
236 17 0.00
237 23 0.00
238 41 0.00
239 14 0.00
240 23 0.00
242 39 0.00
243 20 0.00
244 6 0.00
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (214 bp):
TGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAG
AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATG
ATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC
ATAAAACCTTCGGGTAGGA
Found at i:132477 original size:41 final size:42
Alignment explanation
Indices: 132380--132481 Score: 120
Period size: 42 Copynumber: 2.5 Consensus size: 42
132370 TTCATAGTTT
* *
132380 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGC
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCAAGCATGATGC
* * *
132422 TTAAATCCTTCGGGTCATCTGTAAGCCTTT-AGAGCAAT-ATG-
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCA-AGC-ATGATGC
132463 ATAAGTCCTTCGGGTCATC
1 ATAAGTCCTTCGGGTCATC
132482 CATAAAACCT
Statistics
Matches: 51, Mismatches: 7, Indels: 5
0.81 0.11 0.08
Matches are distributed among these distances:
41 18 0.35
42 31 0.61
43 2 0.04
ACGTcount: A:0.25, C:0.23, G:0.21, T:0.31
Consensus pattern (42 bp):
ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCAAGCATGATGC
Found at i:133297 original size:42 final size:41
Alignment explanation
Indices: 133220--133321 Score: 107
Period size: 42 Copynumber: 2.5 Consensus size: 41
133210 TTCACAATTT
* * * * *
133220 ATAAGTCCTTCGGGCCAT-TAATAAGTCTTTCGAGCATGATG
1 ATAAATCCTTCGGGCCATCT-GTAAGCCTTTAGAGCAAGATG
* *
133261 ATGAAATCGTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG
1 AT-AAATCCTTCGGGCCATCTGTAAGCCTTTAGAGCAAGATG
*
133303 ATAAGTCCTTCGGGCCATC
1 ATAAATCCTTCGGGCCATC
133322 CATAAGACTT
Statistics
Matches: 49, Mismatches: 10, Indels: 4
0.78 0.16 0.06
Matches are distributed among these distances:
41 16 0.33
42 32 0.65
43 1 0.02
ACGTcount: A:0.26, C:0.21, G:0.24, T:0.29
Consensus pattern (41 bp):
ATAAATCCTTCGGGCCATCTGTAAGCCTTTAGAGCAAGATG
Found at i:134349 original size:42 final size:38
Alignment explanation
Indices: 134274--134375 Score: 105
Period size: 42 Copynumber: 2.6 Consensus size: 38
134264 CACAATTTAT
* * * * *
134274 AAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATGATGG
1 AAGTCCTTCGGG-CATCTGTAAGCCTTTAGAGCAAGAT-G
*
134314 TTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG
1 --AAGTCCTTCGGG-CATCTGTAAGCCTTTAGAGCAAGATG
134355 AAGTCCTTCGGGCATCTGTAA
1 AAGTCCTTCGGGCATCTGTAA
134376 AACCTTCGGA
Statistics
Matches: 52, Mismatches: 8, Indels: 4
0.81 0.12 0.06
Matches are distributed among these distances:
38 9 0.17
39 11 0.21
41 1 0.02
42 31 0.60
ACGTcount: A:0.24, C:0.22, G:0.25, T:0.29
Consensus pattern (38 bp):
AAGTCCTTCGGGCATCTGTAAGCCTTTAGAGCAAGATG
Found at i:135426 original size:427 final size:427
Alignment explanation
Indices: 119671--150674 Score: 42144
Period size: 427 Copynumber: 72.7 Consensus size: 427
119661 AACAAACCCC
* * * * *
119671 TCAGTAAGTCTTGCGAGCATGATGCTTAAAACCTTCAGGTCATCTGTAACCCTTAAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
119736 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * *
119801 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACAAAGTATGCAATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * *
119866 TTATAAGTCCTTCAGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTTGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* *
119931 TAAGCCTTTAGAGCAAGATGGTAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
** *
119996 CACATGAATTTGGAAATAAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAA-TGAAGAAT
325 CACATGAATTT-GAAA-ATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAAT
120060 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
387 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
120101 TCAGTAAGACTTTCGAGCATGATGCTTAAAACCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
120166 GATAAGTCCTTTGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* *
120231 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATAGAATTCGATTTTCAAAATTTCACAA
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA-AGAATGCGATTTTCAAAATTTCACAA
*
120295 TTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
120360 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
* * *
120425 TCACATGAATTTGAAAATGAAAAAAATGTTGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAAT
324 TCACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAT
*
120490 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTTGGGCCA
387 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
120531 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
120596 GATAAGTCCTTCGGGACATCCTAAAACTTTCGGGTTGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * * *
120661 AAATGATGTTTTAAGATGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTTAGAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * * * * * *
120726 TATATGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATTATGGTTAATTTCTTAGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* **
120791 AAGCCTTTAGAGCAAGATGATAAGTCCTTCAGGCCATCTGTAAAACCTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * * * * *
120856 ACATGAATTTGAAAATGAAAATTGATGTTTTAAGAATATGGAATTTTTGAAAACGAAAAATGCAA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
*
120921 TTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
120958 TCAGTAACTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
121023 GATAAGTCCTTCGGGCCATCCATAAAACCTTCAGGTAGGATATTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* *
121088 AAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGAAGAATGCGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
* * *
121153 ATTTATAAGTCCTTCGGGCCATCAGTAAGTC--T---GCATGGTACTTAAATCCATCGGGTCATC
193 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATC
* ** * * *
121213 TGTAAGCATTTAGAGCAAGATGATAAGTCCTTCGGGCCAAACATAAGACCTTTGGGTAGGATGTC
258 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTT
* * *
121278 TTCA-ACTGAATTTGAAAATGAAAAAAATGATGTTTTTAGAAGATGGAATTTTTGAAAACGAAGA
323 TTCACA-TGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGA
*
121342 ATGCGATTTTCAAAATTTCACAATTTATAAGTCATTCGGGCCA
385 ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
121385 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTGGGGTCATCTGTAAGCCTTTAGAGTAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
121450 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* * * *
121515 AAAAAAGATGTTTTAAGAAGAT-GAATTTTTTTAAAACTAAGAATGCAATTTTCAAAATTTCACA
129 AAAAATGATGTTTTAAGAAGATGGAA-TTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
* * * *
121579 ATTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGATTAAATCCTTCAGGCCATC
193 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATC
** * * *
121644 AATAAGTCTTTAGATCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACTTTCGGGTAGGATGTT
258 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTT
**
121708 TTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAAA
323 TTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATG
* *
121773 TGATTTTAAAAATTTCACAATTTATAAGTCCTTCGGGCCA
388 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
121813 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCCGGTCATCTGTAAGTCATTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
121878 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * *
121943 AAATGATATTTTAA-AAGATGAAATTTTTGAAAACTAAGAATGCGATTTTGAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* *
122007 TATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATTTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * *
122072 AAGTCTTTAGAGCAAGATGATAAGTCTTTCGGGCCATCC-TAAAACTTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * * *
122136 ACATAAATTTGAAAATGAAAAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
* * *
122201 TTTTCAAAATTTCACAATTTATAAGTCTTTCAGACCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
122238 TCAGTAAGTCTTTCGAGTATGATGTTTAATTCCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
122303 GATAAGTCCTTCGTGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * *
122368 AAAATGATGTGTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * *
122433 TTATAAATCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTTATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * * *
122498 TAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCTATAAAACCTTCAGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
*
122563 CACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATG---TTTTAGAGCAATA-TGAA-
325 CACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGAAATTTTTGA--AA-ACT-AAG
* *
122623 AATCGTATTCTTCATTTTCAAAAATTCACAATTTATAAGTCCTTCGGGCCA
384 AAT-G----C--GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
122674 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
122739 GATAAGTCCTTCGGGCTATACCTAAGACCTTTGGGTAGGATGTCTTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
* * * *
122803 AAAAAAAGATGTTTTAAGAAGATGGAATTTTTGAAAGCAAAGAATGTGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
** * *
122868 ATTTATAAGTCCTTATGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCATC
193 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATC
* *
122933 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGATGTT
258 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTT
*
122998 TTTACATGAATTTGAAAATG-AAAATG-TGTGTTTAAGAAGATGAAATTTTTGAAAACTAAGAAT
323 TTCACATGAATTTGAAAATGAAAAATGATGT-TTTAAGAAGATGAAATTTTTGAAAACTAAGAAT
* *
123061 GCGATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCA
387 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
123102 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
123167 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
** *
123232 AAATGATGTTTTAAGAAGATGGGTTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* *
123297 TAT-AGTCC-TCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATTTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
123360 AAGTCTTTAGAGCAAGATGATAAGTCTTTC-GGCCATCC-TAAAA-CTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * *
123422 ACAT-AATTTGAAAATGAAAAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
* * *
123486 TTTTCAAAATTTCACAATTTATAAGTCTTTCAGACCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
123523 TCAGTAAGTCTTTCGAGTATGATGTTTAATTCCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
123588 GATAAGTCCTTCGTGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * *
123653 AAAATGATGTGTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * *
123718 TTATAAATCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTTATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* *
123783 TAAGCCTTTAGAGCAATATGATAAGTCCTTCGGG---T-CATAAAACCTTCAGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* *
123844 CACATGAATTTGAAAATGAAAAAATGATG-TTTAAGAAGATG---TTTTAGCAATA-TGAA-AAT
325 CACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTG-AAAACT-AAGAAT
*
123903 CGTATTCTATTTTCAAAA-TTCACAATTTATAAGTCCTTCGGGCCA
387 -G----CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
123948 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
124013 GATAAGTCCTTCGGGCTATACCTAAGACCTTTGGGTAGGATGTCTTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
** * *
124077 AAAAAAAATGTTTTAAGAAGATGGAA-TTTTGAAAGC-AAGAATGTGA-TTTCAAAATTTCACAA
129 AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
** * *
124139 TTTATAAGTCCTTATGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCATCT
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
*
124204 GTAAG-CTTTAGAGCAAGATGATAAGTCCTTCGAGCCATCCAT-AAACCTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
*
124267 TTACATGAATTTGAAAATGAAAAATG-TGTTTTAAGAAGATG-AATTTTTGAAAACTAAGAATGC
324 TCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGC
* *
124330 GATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCA
389 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
124369 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
124434 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
** *
124499 AAATGATGTTTTAAGAAGATGGGTTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
124564 TATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCTTTCGGGTCATTTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
*
124629 AAGTCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAA-CTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * *
124692 AC-T--ATTTGAAAATGAAGAATGATATTTTAAGAAGATGAAA-TTTTGAAAACGAAGAATGCGA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
* * * *
124753 TTTTCAAAATTTTACAATTTATAAGTCTTTCAGTCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
124790 TCAGTAAGTCTTTCGAGTATGATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
124855 GATAAGTCCTTCGGGCCATCCGTAAAACCTTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * *
124920 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
*
124985 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * * *
125050 TAAGCCTTTAGAGCAATATGATAAGTCATTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
125115 CACATGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGAAA-TTTTGAAAA-TGAAGAATG
325 CACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATG
125178 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
388 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
125218 TCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATATGTACGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
125283 GATAAGTCCTTCGGG--AT-ATAAGACCTT-GGGTAGGATGTCTTCA-ATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-A
* ** * * * *
125343 AAAATGATGCTTTAAGAAGATGGAA-CCTT--CAGCAAAGAATGTGATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* *
125405 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATTATGCTTAAAACCTTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * *
125470 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGCTGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* * *
125535 TACATGAATTTGAAATTGAAAAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
* *
125600 ATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * ** *
125638 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTTTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
125703 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
125768 AAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * * *
125833 TATAAGTCCTTTGGGCCATCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
125898 AAGCCTTTAGAGCAAGATGATAAGTCCTTTGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * * * * *
125963 ACATGTATTTGGAAATAAAAAAATGATGTTTTAAGAAGATGGAGTTTTT-AAAAATGAAGAATGC
326 ACATGAATTTGAAAAT-GAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATGC
126027 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
389 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
126066 TCAGTAAGACTTTCGAGCATGATGCTTAAAACCTTTGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
126131 GATAAGTCGTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* *
126196 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATAGAATTCGATTTTCAAAATTTCACAA
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA-AGAATGCGATTTTCAAAATTTCACAA
*
126260 TTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
**
126325 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCTGTAAAACCTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
* * * *
126390 TCACATGAATTTGAAAATGAAAATTGATGTTTTAAGAATATTG-AATTTTTGAAAACGAAAAATG
324 TCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGA-TGAAATTTTTGAAAACTAAGAATG
* * *
126454 CAATTTTCAAAATTTCATAATTTATAAGTCCTTCAGGCCA
388 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * * *
126494 TCAGTAACTCTTTCAAGAATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGGAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
126559 GATAAGTCCTTCGGGCCATCCATAAAACCTTCAGGTAGGATATTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* * **
126624 AAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGAAGAATATGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
* * * *
126689 TTTTATAAGTCCTTCGGGCCATCAGTAAGTC--T---GCATGGTACTTAAATCCATCGGGTCATC
193 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATC
* ** * * *
126749 TGTAAGCATTTAGAGCAAGATGATAAGTCCTTCGGGCCAAACATAAGACCTTTGGGTAGGATGTC
258 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTT
* * *
126814 TTCA-ACTGAATTTGAAAATGAAAAAAATGTTGGTTTT-AGAAGATGGAATTTTTGAAAACGAAG
323 TTCACA-TGAATTTGAAAATG--AAAAATGAT-GTTTTAAGAAGATGAAATTTTTGAAAACTAAG
* * *
126877 AATGCGATTTTCAAAATTTCACAATTTATAAGTCATTTGGGCTA
384 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
126921 TCAGTAAGTCTTCCGAGCATGATGCTTAAAACCTTGGGGTCATCTGTAAGCCTTTAGAGTAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
126986 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * *
127051 AAAATGATGTTTTAAGAAGATGAAATTTTTTAAAACTAAGAATGCAATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * * *
127116 TTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGATTAAATCCTTCAGGTCATCTA
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* *
127181 TAAGTCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACTTTCGGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* *
127245 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAGAATGCG
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
*
127310 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGTCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * * *
127348 TCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
127413 GATAAGTCTTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
127478 AAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * * * *
127543 TATAAGT-CTTCAGACCATCAGTAAGTCTTTCGAGTATGATG-TTAATTCCTTTGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * *
127606 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGTGCCATCCGTAAAACCTTCGGGTAGAATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * * *
127671 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
*
127736 TTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
127773 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTTATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
127838 GATAAGTCCTTCGGGTCATCTATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* * *
127903 AAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGAAGAATACGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
*
127968 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATC
193 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATC
* * * * *
128033 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCTATACATAAGACCTTTGGGTAGGATGTA
258 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTT
* *
128098 TTCA-ACTGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAGA-AAAGA
323 TTCACA-TGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAA-ACTAAGA
* *
128161 ATGTGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGTCCA
385 ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
128204 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
128269 GATAAGTCCTTCGAGCCATCC-ATAACCTTC-GGTAGGATGTTTTTACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * *
128332 AAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTGACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
128397 TATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
128462 AAGTCTTTA-AGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACTTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* ***
128525 ACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAAGATGGGTTTTTTGAAAACTAAGAATGCGA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
128590 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
128627 TCAATAAGTCTTTCGAGCATGATGCTTAAATCTTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
128692 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * * *
128757 GAATGATATTTTAAGAAGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTTACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * * * * *
128822 TATAAGTCTTTCAGTCCATCAGTAAGTCTTTCGAGTATGATGGTTAATTCCTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
128887 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCGTAAAACCTTCGGGTAGAATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* **
128952 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAAAGAA-AATGC-A
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
*
129015 TTTTC-AAATTTCATAATTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
129051 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
129116 GATAAGTCATTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* * *
129181 AAAAAATGATGTTTTAAGAAGATGAAATTTTCGAAAATGAAGAATGCGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
*
129246 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATC
193 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATC
* * * * * *
129311 TGTACGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCTATACATAAGACCTTTGGGTAGGATGTC
258 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTT
* * ** * * *
129376 TTCA-ACTGAATTTGAAAATGAAAAAATGATGCTTTAAGAAGATGGAA-CCTT--CAGCAAAGAA
323 TTCACA-TGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAA
* *
129437 TGTGATTTTCAAAATTTCACAATTTATAAGTCCTTTGGGCCA
386 TGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
129479 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATCTGTAATCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * ** * *
129544 GATAAGTCCTTCGAGCCATCC-ATAA-CTTCGGGTAGTCTGTTTTTACATGAATTTGAAATTGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * *
129607 AAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTGACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
129672 TATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATTATGCTTAAA-CCATTCGGGTCATCTG
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCC-TTCGGGTCATCTG
* *
129736 TAAGTCTTTA-AGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACTTTCGGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* *
129799 CACATG-ATTTGAAAATG-AAAATGATGTTTTAAGAAGATGGATTTTTTGAAAA-TAAGAATGCG
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
*
129861 ATTTTCAAAATTTCACAATTTATAAGTCCTTTGGGCCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
129899 TCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * ** *
129964 GATAAGTCCTTTGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGGTAATAA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAAT-G
* * * *
130029 AAAAATGATGTTTTAAGAAGATGG-AGTTTTAAAAATGAAGAAAGCGATTTTCAAAATTTCACAA
129 AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
* * *
130093 TTTATAAGTCCTTCGGGCCATCA-TAAGACTTTCGAGCATGATGCTTAAAACCTTTGGGT-ATCT
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
* *
130156 GTAAGCCTTTAGAGCAAGATGATAAGTCGTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
*
130221 TCACATGAATTTGAAAATG-AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATAGAATT
324 TCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTA-AGAATG
130284 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
388 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
130324 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
130389 GATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
*
130454 AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACGA
129 AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
* *
130519 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCAGGTCAT-T
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
* *
130583 -TAAGTCTTTAGAGCAAGATGATAAGTCCTTCAGGCCATCC-TAAAA-CTTC-GGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
* *
130644 TCACATAAATTTGAAAATGAAAAATGATGTTTTAAG-A-A--AAA-TTTTGAAAACGAAGAATGC
324 TCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGC
130704 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
389 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
130743 TCAGGAAGTCTTTCGAGCATGA----TAATTCATTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
130804 GATAAGTCCTTCGGG-CA--ATAAAA-CTTCGGGTAGGATG-TTTCACATGAATTTGAAAATG-A
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
130863 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
130928 TATAAGTCCTTC-GGCCATCAGTAAGTCTTTCAAGGATGATGCTTAAATCATTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * *
130992 AAGCCTTTAGAGC---A--ATAAGTCCTTCGGGCCATCCATAAAACATTCAGGTAGGATATTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
131052 ACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAA-TGAAGAATG
326 ACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATG
131116 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
388 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
131156 TCAGTAAGTCTTTCGAGCATGATACTTAAATCCTTCGGGTCATCTGTAAGCCGTTTAGAGCAAGA
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCC-TTTAGAGCAAGA
* * * *
131221 TGATAAGTCCTTCGGGCCATACATAAGACCTTTGGGTAGGATGTCTTCAC-TGAATTTGAAAATG
65 TGATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG
* *
131285 AAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGAAGAATGCGATTTTCAAAAGTTCA
129 ---AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCA
* * *
131350 CAATTTATAAGTCATTCGGTCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCA
191 CAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCA
* * *
131415 TCTGTAAGCCTTTAGAGTAAGATGATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGATG
256 TCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATG
* * *
131480 TTTT-ACATGAATTTGATAATGAAAAATGATGTTTTAAGAAGATG--TTTTTTTAAAACTAAGAA
321 TTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAA
131542 TGC--TTTTC-AAATTTCACAATTTATAAGTCCTTCGGG-CA
386 TGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * * * *
131580 --A-TAAGTCTTTCGAGCATGATGCTTAAATCCTTCAGGTAATATATAAGTCTTTAGAGAAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
131642 GATAAGTCCTTCGGGCCATCCTAAAACTTTCTGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
131707 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAAGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
131772 TATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGACGCTTAAATCCTTCCGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * * *
131837 AAGTCTTTAGAGCAGGATGATAAGTCCTTCGGGCTATCC-TAAAACTTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
*
131901 ACATGAATTTGAAAATGAAAAATGACGTTTTAA-AAGATGAAATTTTTGAAAACTAAGAATGCGA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
*
131965 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGACA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
132002 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*** * * ** ** * *
132067 GATAA---CTT-GTTTTCA-CAT-AAA--TT--TG-AAAATG---AAAAATGATATTTTAAGAA-
66 GATAAGTCCTTCG-GGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGA-ATTTGAA-AAT
* *
132117 GATAAAA--AT-TTTGAAAACGAAGAATGCG-A-TTTT-----C--A-AA----A-TTTCACAAT
128 GA-AAAATGATGTTT--TAA-GAAG-ATG-GAATTTTTGAAAACGAAGAATGCGATTTTCAAAAT
* * ** * * * * * * * *
132164 TT-ATAAGTCCT-TCGGACCATC-AG---TAAGT--CT--TTCGAGAATGATGGTTAATTCCTTC
187 TTCACAA-T-TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTC
*
132219 GGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCGTAAAACCTTCGGGT
250 GGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGT
* *
132284 AGAATGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAAC
315 AGGATGTTTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC
* * * * * *
132349 GAAAAATGCAATTTTTAAAATTTCATAGTTTATAAGTCCTTCGGGCCA
380 TAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
132397 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
132462 GATAAGTCCTTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAAAGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* * *
132527 AAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGAAGAATGTGATTTTCAAAATTTCAC
129 --AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCAC
*
132592 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* * *
132657 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGG-C-TACATAAGACCTTTGGGTAGGATG-
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGT
*
132719 --TCAC-TGAATTTGAAAATGAAAAATGATG-TTTAAGAAGATGGAA-TTTTGAAAA-TGAAGAA
322 TTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAA
*
132778 TGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGAGCCA
386 TGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
132820 TCAGTAATTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
132885 GATAAGTCCTTC--GCCATCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTG-AAATG-A
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * *
132946 AAATG-T-TTTTAAGAAGATGAAATTTTTTAAAACTAAGAATGCGATTTTCAAAA-TTGACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * * *
133008 TATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATATGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * * *
133073 AAGTCTTTAAAGCAAGATGATAAGTCCTTTGGGCCATCC-TAAAACTTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* *
133137 ACATGAGTTTGAAAATG-AAAATGATGTTTTAAGAAGATG-GATTTTTGAAAACTAAGAATGCGA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
133200 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * * *
133237 TTAATAAGTCTTTCGAGCATGATGATGAAATCGTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
133302 GATAAGTCCTTCGGGCCATCCATAAGA-CTTCGGGTAGGATGTTTTCACATGAATTTGGAAATAA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAAT-G
*
133366 AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATG-A-AATGCGATTTTCAAAATTT--C-A
129 AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
*
133426 TTTATAAGT-CTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTC-GGTCATCT
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
133489 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTC-GGCCATCC-T-AAACCTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
* * * *
133551 TCACATGAATTTGAAAATGAAAAAATGATGTTTTACGATGATGGAATTTTTGAAAACGAAGAATG
324 TCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATG
133616 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
388 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
** * * *
133656 TCAGTAAAACTTTCGAGCAAGATGCTTAAAACCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
133721 GACAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * *
133786 AAAATGATG-TTTAAGAAGATGAAATTTTTGAAAAC-TAGAATTCGATTTTCAAAATTTCACAA-
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* *
133848 TTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTC-GGTCATTTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
133912 TAAGCCTTT--AGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGG-T-TTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* * * *
133973 CACATGAATTTGAAAATGAAAAATGATGTTTTACGATGATGGAATTTTTGAAAACGAAGAATGCG
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
134038 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
134076 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATTTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
134141 GATAAGTCCTTCAGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
134206 AAATGATGTTTTAAGACGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
134271 TATAAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATGATGGTTAATTCCTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
** *
134336 AAGCCTTTAGAGCAAGATG--AAGTCCTTCGGG-CATCTGTAAAACCTTCGGATAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * * * *
134398 ACATGAATTTGAAAATGAAAATTGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
*
134463 TTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
134500 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCAGGTAGGATTTCTTAAAACCTTCGGGTCATCTA
1 TCAGTAAGTCTTTCGAGCATGATGC-T---T-A---A--A-----T----CCTTCGGGTCATCTG
* * * *
134565 TAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCGATAAAACCTTCAGGTAGGATGTTTT
47 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTT
* * * *
134630 CACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAAAAGAAATTTTTGAAAATGAAGAATG
111 CACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATG
134695 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGC
174 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGC
* * * * * *
134760 TTAAATACTTCAGGTCATATTTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCTATACATAA
239 TTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAA
* * * *
134825 GACCTTTGGGTAGGATGTCTT--C---AA--TGAAAATGAAAAAATGATGTTTTAAGAAGATGGA
304 AACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAA
*
134883 ATTTTTGAAAA-TGAAGAATGCGATTTTCAAAATTTCTCAATTTATAAGTCCTTCGGGCCA
368 ATTTTTGAAAACT-AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
134943 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTTGGGTCTTCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * * *
135008 GATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTATGATGTTTTTACATTAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * *
135073 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATACGATTTTCAAAATTTGACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * * *
135138 TTATAAGTCCTTTGGCCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * * *
135203 TAAGTCTTTAAAGCAAGATGAAAAGTCCTTCGGGCCATCC-TAAAACTTTCGGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* * * * * *
135267 CACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAATATGGAATTTTTGAAAACGAAAAATGCA
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
*
135332 ATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
135370 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
135435 GATAAGTCCTTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* * *
135500 AAAAAAAAAGATGTTTTAAGAAGATGAAATTTTTGAAAATGAAGAATGCGATTTTCAAAATTTCA
129 ---AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCA
*
135565 CAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCA
191 CAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCA
* * *
135630 TCTGTAAGCC-TTAGAGCAAGATGATAAGTCCTTCGGGCTATACATAAGACCTT-GGGTAGGATG
256 TCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATG
* *
135693 TCTTCA-ACTGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAA-TGAA
321 TTTTCACA-TGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AA
*
135756 GAATGCGACTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
383 GAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
135801 TCAGTAATTCTTTAGAGCATGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
135866 GATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAGTTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
135931 AAAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGTGATTTTCAAAATTTGACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * * *
135996 TTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATATG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * * *
136061 TAAGTCTTTAAAGCAAGATGATAAGTCCTTCAGGCCATCC-TAAAACTTTCGGGT---A-GTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* * *
136121 CACATG-A-GTG-AAATGAAAAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAGAATGCG
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
*
136183 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGTCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * * *
136221 TCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCAGGTCATCTATAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
136286 GATAAGTCCTTCGGGCCATCCATAAAACCTTTGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* *
136351 AAAAATGATGTTTTACGATGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
129 AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAA
* *
136416 TTTATAA-TCC-TCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTTGGGTCAT-T
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
* * *
136478 GTAAGTCTTTAGAGC---ATGATAAGTCCTTCAGGCCATCC-TAAAACTTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
* * *
136539 TCACAT-AATTTGAAAATGAAAAATGATGTTTT-A-ACGATGAAAAATTTTGAAAACGAAGAATG
324 TCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATG-AAATTTTTGAAAACTAAGAATG
136601 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
388 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
136641 TCAGGAAGTCTTTCGAGCATGATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
** * *
136706 GATAAGTCCTTCGGGAAATCTGTAAAACCTTCGGATAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
136771 AAATTGATGTTTTAAGAAGCTGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
*
136836 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGCTTAAATCAGGTAGGATTTCTT
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGC-T---T-A---A--A-----T
* * *
136901 AAAACCTTCGGGTCATCTGTAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCGATAAAA
245 ----CCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAA
* * *
136966 CCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGAAAAAATGATGTTTTAAGAAAAAGAAA-
306 CCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAAT
137030 TTTTGAAAA-TGAAGAATGCGATTTTCAAAATTTCACAA-TTATAAGTCCTTCGGGCCA
370 TTTTGAAAACT-AAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
137087 TCAGTAAGTCTTTCG-GAATGATGCTTAAATACTTCAGGTCATATGTAAGCCTTT--AGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * * *
137149 GATAAGTCCTTCGGGCTATAC-ATAGACCTTTGGGTAGGATGTCTTCA-ATG-A----AAAA--A
66 GATAAGTCCTTCGGGCCATCCTA-AAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
*
137205 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGAAGAATGCGA-TTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * *
137269 TTATAAGTCCTTCGGGCCATCTGTAAGTCTTTCGAGCATGATGCTTAAAACCTTTGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * * * *
137334 TAAGCCTTTAGAGCAAGATGATAAGTCCTTTGAGCCATCCATAAGACCTTCAGGTATGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* *
137399 TACATGAATTTGAAAATGAAAAATGATG-TTTAAGAAGATGAAA-TTTTGAAAA-TAAGAATACG
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
* *
137461 ATTTTCAAAA-TTGACAATTTATAAGTCCTTCGGCCCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
137498 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
137563 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * *
137628 AAATGATGTTTTAAGAATATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCATAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
*
137693 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * *
137758 AAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
*
137823 ACATGAATTTGAAAATGAAAAAAAAAGATGTTTTAAGAAGATGAAATTTTTGAAAA-TGAAGAAT
326 ACATGAATTTGAAAATG---AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAAT
137887 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
387 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
137928 TCAGTAATTCTTTCGAGCATGATGCTTAAAACCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
137993 GATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAGTTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
138058 AAAATGCTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGTGATTTTCAAAATTTGACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * * *
138123 TTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATTTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* ** * *
138188 TAAGTCTTTAGAGCAAGATGATAAGTCCTTCAAGCCATCC-TAAAACTTTCGGGTAAGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* * *
138252 CACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAGAATGCG
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
138317 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
138355 TCAATAAGTCTTTCGAGCATGATGATGAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * * *
138420 GATAAGTCCTTCAGGCCATCCATAAGACTTTCGGGTAGGATGTTTTCACATGAATTTGGAAATAA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
138485 AAAATGATGTTTTAAAAAGATGAAAGTTTTGAAAACTAAGAATGAGATTTTCAAAATTTCACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
*
138550 TGATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * *
138615 TAAACCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCAGGTAGGGTGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* * *
138680 CACATAAATCTGAAAATGAAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGGATG
325 CACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATG
* *
138745 C-ATTTTAAAAATTTCACAATTTATAAGTCCTTCGGACCA
388 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
138784 TCAGTAAGTCTTTCGAGCATGATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
138849 GATAAGTCCTTGGGGCCATCCGTAAAACATTCGGGTAGAATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
138914 AAAATGACGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTTATAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* *
138979 TTATAAGTCCTTCAGGCCATCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * *
139044 TAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
139109 CACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAA-TGAAGAAT
325 CACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAAT
139173 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
387 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
139214 TCAGTAAGTCTTTCGACCATGATGCTTAAATACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
** * * * * *
139279 GATAAGTCCTTCGGGATATGCATTAGACCTTTGGGTAGGATGTCTTCA-ACTGAATTTGAAAATG
66 GATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAATG
*
139343 AAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAATGAAGAATGCGATTTTCAAAATTTCACA
129 -AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACA
*
139408 ATTTATAAGTCCTTCGGGCCATCAGTAATTCTTTCGAGCATGATGCTT-AA-CCTTC-GGTCATC
193 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATC
* * *
139470 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGAGTTT
258 TGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGA-TGT
* *
139535 TTTTACATGAATTTGAAAATGAAAAATGTTGTTTTAAGAAGATGAAA-TTTTGAAAACTAAGAA-
322 TTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAT
*
139598 -CGATTTTCAAAATTTGACAA-TTATAAGTCCTTC-GGCCA
387 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
139636 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTC-TTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
139700 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
139765 AAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * * *
139830 TATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGATGAAATCGTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * * *
139895 AAGCCTTTAGAGGAAAATGATAAGTCCTTCGGGCCATCCATAAGACTTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * *
139960 ACATGAATTTGGAAATAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAA-TGAAGAATGC
326 ACATGAATTTGAAAAT-GAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATGC
140024 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
389 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
140063 TCAGTAAGACTTTCGAGCATGATGCTTAAAACCTTCGGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
140128 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* *
140193 AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAAC-ATAGAATTCGATTTTCAAAATTTCACAA
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA-AGAATGCGATTTTCAAAATTTCACAA
* *
140257 TTTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCCGGTCATCT
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
140322 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
* * * * *
140387 TCACATGAATTTGAAAATGAAAAAATTATGTTTTACGATGATGGAATTTTTGAAAACGAAGAATG
324 TCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATG
140452 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
388 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
140492 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATTTGTAAGTCTTTAGAGAAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
140557 GACAAGTCCTTCAGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * *
140622 AAATGATGTTTAAAGACGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
140687 TATAAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATGATGGTTAATTCCTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* ** *
140752 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCAATCTGTAAAACCTTCGGATAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * * * * *
140817 ACATGAATTTGAAAATGAAAATTGATGTTTTAAGAAGATGGAATTTTTAAAAACGAAAAATGCAA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
*
140882 TTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
140919 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
140984 GATAAGTCCTTCGGGCCATCCATAAAACCTTCAGGTAGGATATTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* *
141049 AAAAAAATGATGTTTTAAGAAGATGAAATTTTTG-AAA--ATGAATGCGATTTTCAAAATTTCAC
129 --AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCAC
* * *
141111 AA-TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAAGATACTTAAATCCTTAGGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* *
141175 CTGTAAGCCTTTAGAGCAAGATGAT-AGTCCTTCGGGCCATACAT--AACCTTTGGGTAGGATGT
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGT
* * *
141237 CTTCA-ATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGGAA-TTTTGAAAACGAAGA
322 TTTCACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGA
*
141300 ATGCGATTTTCAAAATTTCACAATTTATAAGTCATTCGGGCCA
385 ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
141343 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGTAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
141408 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTGATAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
141473 AAAATGATGTTTTAAGAAGATGAAATTTTTTAAAACTAAGAATGCAATTTTCAAAATTTCACAAG
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* *
141538 TTATAAGTCCTTCGGGCCATCAGTAATTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* *
141603 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGATGTGTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGT-TT
*
141668 T-ACATGAATTTGAAAATGAAAAATGTTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGC
324 TCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGC
* *
141732 GATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCA
389 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
141771 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
141836 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
141901 AAATGATGTTTTAAGAAGATGGATTTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * * * *
141966 TATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGATGAAATCGTTAGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
142031 AAGCCTTTAGAGCAA-ATGATAAGTCCTTCGGGCCATCCATAAGACTTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * *
142095 ACATGAATTTGGAAATAAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAA-TGAAGAATGC
326 ACATGAATTTGAAAAT-GAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATGC
142159 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
389 GATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
142198 TCAGTAAGACTTTCGAGCATGATGCTTAAAACCTTCAGGTAATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
142263 GATAAGTCCTTCGGG-CATCCATAAGA-CTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* *
142326 AAAATGATGTTTTAAGAAGATGAAATTTTTG-AAAC-ATAGAATTCGATTTTCAAAATTTCACAA
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGA-AGAATGCGATTTTCAAAATTTCACAA
* *
142389 TTTATAAGTCCTTCGGGCCATCAAT-A-TCTTTCGAGCATGATGCTTAAATCCTTCCGGTCATCT
194 TTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCT
142452 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
259 GTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTT
* * * * *
142517 TCACATGAATTTGAAAATGAAAAAATTATGTTTTACGATGATGGAATTTTTGAAAACGAAGAATG
324 TCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATG
*
142582 CGATTTTCAAAATTTCACAATTTATGAGTCCTTCGGGCCA
388 CGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
142622 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATTTGTAAGTCTTTAGAGCACGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
142687 GACAAGTCCTTCAGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * *
142752 AAATGATGTTTAAAGACGATGAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * * *
142817 TATAAGTCCTTCGGGCTATCAGGAAGTCTTTCGAGCATGATGGTTAATTCCTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* ** * *
142882 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCAATCTGTAAAACCTTCGGATAGGATGCTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * * * *
142947 ACATGAATTTGAAAATGAAAATTGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
*
143012 TTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
143049 TCAGTAAGTC-TTCAAGCATGATGCTTAAAT-CATCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
143112 GATAAGTCCTTC-GGCCATCC-ATAAACCTTCAGGTAGGATATTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCCTA-AAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* *
143175 AAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAATGAAGAATGCGATTTTCAAAATTTCAC
129 --AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCAC
* * *
143240 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAAGATACTTAAATCCTTAGGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* * *
143305 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATACATAAGACCTTTGGGTAGGATGT
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGT
* * *
143370 CTTCA-ATGAATTTGAAAA--AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAAT
322 TTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAT
*
143432 GCGATTTTCAAAATTTCACAATTTATAAGTCATTCGGGCCA
387 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
143473 TCAGTAAGTCTTTCGAGCATGATACTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGTAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
143538 GATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTGATAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
143603 AAAATGATGTTTTAAGAAGATGAAATTTTTTAAAACTAAGAATGCAATTTTCAAAATTTCACAAG
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * *
143668 TTATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCAGGTCATCTA
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* *
143733 TAAGTCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACTTTCGGGTAGGA-GTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
*
143796 CACATGAATTTG-AAATG-AAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAAGCG
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
* *
143859 ATTTTAAAAATATCACAATTTATAAGTCCTTCGGGCCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
143897 TCAATAAGTCTTTCGAGTATGATGCTTAAATCCTTCCGGTCATCTGTAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
143962 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGCAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
144027 AAATGATGTTTTAA-AAGATGAAATTTTTGAAAACTAAGAATTCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * * * *
144091 TATAAGTCCTTCGGGACATCAATAAGTCTTTCGAGCATGATGGTTAATTTCTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * *
144156 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCGTAAAACGTTCGGGTAGAATG-TTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * * **
144220 ACATGAATTTGAAAATGAAAAATGA-GTTTTAAGAAGATGGAA-TTTTGAAAACGAAAAATGTAA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
* *
144283 TTTTCAAAATTTCATATTTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
144320 TCAGTAAGTCTTT-GAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATA
1 TCAGTAAGTCTTTCG-AGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGA
* * *
144384 TGATAAGTCCTTCGGGTCATCGATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTG-AAATG
65 TGATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG
* * * *
144448 AAAAAAATGATG-TTTAAGAAAAAGAAATTTTTGAAAATGAAGAATGCGATTTTCAAAATTTCAC
129 --AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCAC
* *
144512 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCAGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* * * *
144577 CTGTAAGCCTTTA-AGCAAGATGATAAGTCCTTCGGGCTATACATAAGACCTTTGGGTAGGATGT
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGT
* *
144641 CTT--C---AA--TGAAAATGAAAAAATGATGTTTTAAGAAGATGGAA-TTTTGAAAA-TGAAGA
322 TTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGA
144697 ATGCGATTTTCAAAA-TTCACAATTTATAAGTCCTTCGGGCCA
385 ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
144739 TCAGTAAGTCTTTCGAGCATGATGCTTAAA-CCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
144803 GATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTATGATGTTTT-ACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * *
144867 AAAATGATGTTTTAAGAAGA--AAATTTTTGAAAACTAAGAATACGATTTTCAAAATTTGACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * *
144930 TTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* *
144995 TAAGCCTTTAAAGCAAGATGATAAGTCCTTC-GGCCATCC-TAAAACTTTCGGGTAGGATG-TTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* * * * *
145057 CACATGAGTTTGAAAATGAAAAATGATGTTTTAAG-A-ATGGAATTTTTGAAAACGAAAAATGCA
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
*
145120 ATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
145158 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCA--TGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* *
145221 GATAAGTCCTTCGGGTCATCCATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG-
* *
145286 AAAAAAATGATGTTTTAAGAAGATGAAATTTTT-AAAATGAAGAATGCGATTTTCAAAATTTCAC
129 --AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCAC
145350 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* * * *
145415 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCTATACATAAGACCTTTGGGTAGGATGT
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGT
* *
145480 CTTCA-ACTGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAA-TGAAG
322 TTTCACA-TGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAG
145543 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
384 AATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
145587 TCAATAATTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGGGTCAAGA
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAG-CAAGA
* * *
145652 GAGCAATGATAGTCCTTCGAGCCATCCATAAAACCTTCGGGTAGGATGTTTTTACATGAATTTGA
65 -TG--AT-A-AGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGA
* * *
145717 AAATGAAAAATGCTG-TTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTT
124 AAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTT
* * *
145781 CACAATTTATAAGTCCTTCGGACCATCAATAAGTCTTTCGAGCATGATGCTT--ATCATTC---T
189 CACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGT
* * * ** * * * *
145841 --TATGTAAGTCTTTAAAGCAAGATGATAAGGGTCAGTAAGTCTTTCAAGCATGATGCTTAAATC
254 CATCTGTAAGCCTTTAGAGCAAGATGATAA--GTC-------C-TTCGGGC--CATCCATAAAAC
* ** *** *** *
145904 ATTCGGGTCA-TCTGTAAGCAGAGCAATATGATAAGTCCTTCGGGCCATCCATAAAACCTTCAGG
307 CTTCGGGT-AGGATGTTTTC--A-C---ATG--AA-T--TT--GAAAAT-GA-AAAA---T---G
* ** * * * ** *
145968 TAGGATATTT--TCACATG-AA--TTTGAAAA-TGAAAAAAT--GATGTTTAAAAAGATGA-AAT
350 -ATG-T-TTTAAGAAGATGAAATTTTTGAAAACT--AAGAATGCGAT-TTTCAAAATTTCACAAT
* ******* *
146024 TT-TGAAAATGAAGAATGCGA
409 TTAT--AAGTCCTTCGGGCCA
** ** * * * *
146044 T-TTTCAA-AATTTC-A-CA--AT--TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAA
1 TCAGT-AAGTCTTTCGAGCATGATGCTTA-AA-TCCTTCGGGTCATCTGTAAGCCTTTAGAGCAA
* * * * * * * ** * *
146101 GAT-TTAAATCCTTAGGGTCAT-CTGTAAGCCTTTAGAGCAATGATAAGTCCTTCGGGCTATACA
63 GATGATAAGTCCTTCGGGCCATCCT-AAAACC-TTCG-GGTAGGAT--GT--TT-----T-CACA
* * * * *** * **
146164 TAAGACCTTCGGGTAGGATGTCTTCAATG-AAAATGAAAAATGATGTTTTAAGA-AG-ATGGAAT
115 T--GA-ATT----T--GA------AAATGAAAAATG----ATGTTTTAAGAAGATGGAAT--TTT
*
146226 TTTGAAAATGAAGAATGCGATTTTCAAAATTTCACAA-TTATAAGTCCTTC-GGCCATCAGTAAG
159 --TGAAAACGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAG
146289 TCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTC
222 TCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTC
* * * * *
146354 CTTCGAGCCATCCATAAGACCTTCGGGTATGATATTTTTACATGAATTTGAAAATGAAAAATGAT
287 CTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAAAAATGAT
* *
146419 GTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATACGATTTTCAAAATTTGACAATTTATAAGT
352 GTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATTTATAAGT
*
146484 CCTTCGGCCCA
417 CCTTCGGGCCA
* * * *
146495 TCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGTCTTTAAAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
146560 GATAAGTCCTTCGGGCCATCCT-AAA-CTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * *
146623 AAATGATGTTTTAAGAATATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
146688 TATAAGTCCTTCGGGCCATCAGTAAGACTTTCGAGCATGATGCTTAAAACCTTCGGGTAATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * *
146753 AAGCCTTTAGAGCAAGATGACAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* *
146818 ATATGAATTTGAAAATGAAAAAAAATGATGTTTTATGAAGATGAAATTTTTGAAAAC-ATAGAAT
326 ACATGAATTTGAAAATG---AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTA-AGAAT
*
146882 TCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
387 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
146923 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCCGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
146988 GATTAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAGTTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* *
147053 AAATGATGTTTTAAGAAGATGGAAGTTTTGAAAACTAAGAATGCGATTTTCAAAATTTCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* *
147118 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATTTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * *
147183 AAGTCTTTAGAGCAAGATGATAAGTCCTTCAGGCCATCC-TAAAACTTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * * *
147247 ACATAAATTTGAAAATGAAAAATGATGTTTTAAGACGATGAAAATTTTGAAAACGAAGAATGCGA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
147312 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
147349 TCAGGAAGTCTTTCGAGCATGATGGTTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
147414 GATAAGTCCTTCGGGCAATCTGTAAAACCTTCGGATAGGATGTTTTCACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
147479 AAATTGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGCAATTTTCAAATTTTCATAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * * *
147544 TTACAAGTCCTTCGGGCCATCAGTAAGTCTTTCAATCATGATGCTTAAATCATTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * * *
147609 TAAGCCTTTAGAGCAATATGATAAGTCCTTCGGGCCATCCATAAAACCTTCAGTTAGGATATTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
147674 CACATGAATTTGAAAATGAAAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAA-TGAAGAAT
325 CACATGAATTTGAAAATG--AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAAT
* *
147738 GCGATTTTCAAAATTTCACAATTTATAAGTCATTTGGGCCA
387 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
147779 TCAGTAAGTCTTTCGAGCATGATACTTAAATCCTTAGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * * *
147844 GATAAGTCCTTCGGGCCATACATAAGACCTTTGGGTATGATG-TCTCA-ACTGAATTTGAAAATT
66 GATAAGTCCTTCGGGCCAT-CCTAAAACCTTCGGGTAGGATGTTTTCACA-TGAATTTGAAAA-T
* *
147907 AAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCAATTTTCAAAATTTCAC
128 -GAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCAC
* *
147972 AATTTATAAGTCATTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* * *
148037 CTGTAAGCCTTTAGTGTAAGATGATAAGTCCTTCGGGCCATCCATAAGACCTTCGGGTAGGATGT
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGT
* * *
148102 TTTTACATGAATTTGATAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTTAAAACTAAGAAT
322 TTTCACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAT
* *
148167 GCAATTTTCAAAATTTCACAAGTTATAAGTCCTTCGGGCCA
387 GCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
148208 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCAGGTCATCTATAAGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
*
148273 GATAAGTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * * * **
148338 AAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAAAGCGATTTTAAAAAAATCACAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
148403 TATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGTATGATGCTTAAATCCTTCCGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* *
148468 AAGTCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACTTTCGGGTAGGATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
*
148532 ACATGAATTTGAAAATGAAAAATGATGTTTTAA-AAGATGAAATTTTTGAAAACTAAGAATTCGA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
*
148596 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGACA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * * *
148633 TCAATAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATTTGTATGTCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
148698 GATAACTCCTTCGGGCCATCCTAAAACTTTCGGGTAGGATGTTTTCACATAAATTTGAAAATGAA
66 GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
* * ** * *
148763 AAACGATATTTTAAGAAGATAAAAATTTTGAAAACGAAGAATGCGATTTTCAAAATTTCAGAATT
131 AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
* * *
148828 TATAAGTCCTTCGGACCATCAGTAAGTCTTTCGAGCATGATGGTTAATTCCTTCGGGTCATCTGT
196 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
* * *
148893 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCGTAAAACGTTCGGGTAGAATGTTTTC
261 AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
* * * **
148958 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAAAATGTAA
326 ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
*
149023 TTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
391 TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
*
149060 TCAGTAAGTCTTT-GAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATA
1 TCAGTAAGTCTTTCG-AGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGA
* * *
149124 TGATAAGTCCTTCGGGTCATCGATAAAACCTTCAGGTAGGATGTTTTCACATGAATTTGAAAATG
65 TGATAAGTCCTTCGGGCCATC-CTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATG
* * * *
149189 AAAAAAATGATGTTTTAAGAAAAAGAAATTTTTGAAAATGAAGAATGCGATTTTCAAAATTTCAC
129 --AAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCAC
* *
149254 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCAGGTCAT
192 AATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCAT
* * * *
149319 CTGTAAGCCTTTA-AGCAAGATGATAAGTCCTTCGGGCTATACATAAGACCTTTGGGTAGGATGT
257 CTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGT
* *
149383 CTT--C---AA--TGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAA-TGAAGA
322 TTTCACATGAATTTGAAAATG-AAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGA
149440 ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
385 ATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
149483 TCAGTAAGTCTTTCGAGCATGATGCTTAAAACCTTTGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * * *
149548 GATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTATGATGTTTTTACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * * *
149613 AAAATGATGTCTTAAGAAGATGAAATTTTTGAAAACTAAGAATACGATTTTCAAAATTTGACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * *
149678 TTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATCTG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* * *
149743 TAAGTCTTTAAAGCAAGATGATAAGTCCTTCGGGCCATCC-TAAAACTTTCGGGTAGGATGTTTT
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTT
* * * * * *
149807 CACATGAGTTTGAAAATGAAAAATGATGTTTTAAGAATATGGAATTTTTGAAAACGAAAAATGCA
325 CACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCG
*
149872 ATTTTCAAAATTTCATAATTTATAAGTCCTTCGGGCCA
390 ATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
* *
149910 TCAGTAAGTCTTTCAAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAATAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
149975 GATAAGTCCTTCGGGTCATCCATAAAACCTTC-AGTCCAGGATGTTTTCATCCA-GAATATGAAA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGT--AGGATGTTTTCA--CATGAATTTGAAA
* * * * * * *** *
150038 A--AAATGGTAGGATGTTTT---CACAT-GAA--TTTGAAAATGAAAAAAAATGATGTTTTAAGA
126 ATGAAA---AATGATGTTTTAAGAAGATGGAATTTTTGAAAACG-AAGAATGCGAT-TTTCAA-A
** * * * ******* * ** **
150095 AGATGA-AATTTTTAAAATGAAGAATGCGAT-TTTCAA-AATTTC-A-CA--AT--TTATAAGTC
185 ATTTCACAATTTAT-AAGTCCTTCGGGCCATCAGT-AAGTCTTTCGAGCATGATGCTTA-AA-TC
* * * * * * * * * ** *
150151 CTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATACTTCGGGTCATCTGT-AAGCCTT
246 CTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG-ATAAGTCCTTCGGGCCATCCATAAAACC-T
* ** * * **
150215 TAGAGCAAGATGATAAGTCCTTCGGGCTATACATAAGACCTTTGGGTAGGATGTCTTCAACTGAA
309 TCG-GGTAG--GAT--GT--TT-----T-CACAT--GA-ATTT--G-AAAATG-----AA---AA
* *
150280 TTTGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTGAAAA-TGAAGAATGCGATTTTC
347 -ATG-A-------------TGTTTTAAGAAGATGAAATTTTTGAAAACT-AAGAATGCGATTTTC
150344 AAAATTTCACAATTTATAAGTCCTTCGGGCCA
396 AAAATTTCACAATTTATAAGTCCTTCGGGCCA
* * *
150376 TCAATAATTCTTTCGAGCATGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
1 TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
* * *
150441 GATAAGTCCTTCGAGCCATCCATAAGACCTTCGGGTAGGATGTTTTTACATGAATTTGAAAATGA
66 GATAAGTCCTTCGGGCCATCC-TAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGA
* * * *
150506 AAAATGCTGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGATTTTCAAAATTTGACAAT
130 AAAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAAT
* * * *
150571 TTATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATATG
195 TTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTG
* *
150636 TAAGTCTTTAAAGCAAGATGATAAGTCCTTCGGGCCATC
260 TAAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATC
150675 AGTAAGTCTT
Statistics
Matches: 27209, Mismatches: 2587, Indels: 1516
0.87 0.08 0.05
Matches are distributed among these distances:
393 67 0.00
394 55 0.00
395 126 0.00
397 3 0.00
398 6 0.00
399 2 0.00
400 5 0.00
401 20 0.00
402 2 0.00
403 21 0.00
404 5 0.00
405 5 0.00
406 78 0.00
407 78 0.00
408 37 0.00
409 32 0.00
410 33 0.00
411 61 0.00
412 166 0.01
413 163 0.01
414 172 0.01
415 223 0.01
416 111 0.00
417 396 0.01
418 345 0.01
419 809 0.03
420 1357 0.05
421 1026 0.04
422 1267 0.05
423 1698 0.06
424 1818 0.07
425 2727 0.10
426 1294 0.05
427 3825 0.14
428 2216 0.08
429 1839 0.07
430 1798 0.07
431 1146 0.04
432 29 0.00
433 123 0.00
434 154 0.01
435 10 0.00
436 155 0.01
437 265 0.01
438 1 0.00
439 20 0.00
440 18 0.00
441 22 0.00
442 30 0.00
443 184 0.01
444 67 0.00
445 76 0.00
446 194 0.01
447 55 0.00
448 27 0.00
449 30 0.00
450 12 0.00
451 37 0.00
452 46 0.00
453 12 0.00
454 7 0.00
455 8 0.00
456 54 0.00
457 46 0.00
458 12 0.00
459 7 0.00
460 6 0.00
461 2 0.00
462 5 0.00
463 11 0.00
464 13 0.00
465 13 0.00
466 179 0.01
467 21 0.00
468 9 0.00
469 11 0.00
470 37 0.00
471 35 0.00
472 8 0.00
473 6 0.00
474 2 0.00
475 37 0.00
476 13 0.00
477 39 0.00
480 4 0.00
482 25 0.00
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (427 bp):
TCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT
GATAAGTCCTTCGGGCCATCCTAAAACCTTCGGGTAGGATGTTTTCACATGAATTTGAAAATGAA
AAATGATGTTTTAAGAAGATGGAATTTTTGAAAACGAAGAATGCGATTTTCAAAATTTCACAATT
TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGT
AAGCCTTTAGAGCAAGATGATAAGTCCTTCGGGCCATCCATAAAACCTTCGGGTAGGATGTTTTC
ACATGAATTTGAAAATGAAAAATGATGTTTTAAGAAGATGAAATTTTTGAAAACTAAGAATGCGA
TTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCA
Found at i:135450 original size:41 final size:42
Alignment explanation
Indices: 135353--135454 Score: 120
Period size: 42 Copynumber: 2.5 Consensus size: 42
135343 TTCATAATTT
* *
135353 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGC
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCAAGCATGATGC
* * *
135395 TTAAATCCTTCGGGTCATCTGTAAGCCTTT-AGAGCAAT-ATG-
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCA-AGC-ATGATGC
135436 ATAAGTCCTTCGGGTCATC
1 ATAAGTCCTTCGGGTCATC
135455 CATAAAACCT
Statistics
Matches: 51, Mismatches: 7, Indels: 5
0.81 0.11 0.08
Matches are distributed among these distances:
41 18 0.35
42 31 0.61
43 2 0.04
ACGTcount: A:0.25, C:0.23, G:0.21, T:0.31
Consensus pattern (42 bp):
ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCAAGCATGATGC
Found at i:136317 original size:42 final size:41
Alignment explanation
Indices: 136204--136310 Score: 133
Period size: 42 Copynumber: 2.6 Consensus size: 41
136194 TTCACAATTT
* * *
136204 ATAAGTCCTTCGGGTCATCAATAAGTCTTTCGAGCATGATG
1 ATAAGTCCTTCGGGTCATCAATAAGCCTTTAGAGCAAGATG
* * *
136245 ATGAAATCCTTCAGGTCATCTATAAGCCTTTAGAGCAAGATG
1 AT-AAGTCCTTCGGGTCATCAATAAGCCTTTAGAGCAAGATG
* *
136287 ATAAGTCCTTCGGGCCATCCATAA
1 ATAAGTCCTTCGGGTCATCAATAA
136311 AACCTTTGGG
Statistics
Matches: 55, Mismatches: 10, Indels: 2
0.82 0.15 0.03
Matches are distributed among these distances:
41 20 0.36
42 35 0.64
ACGTcount: A:0.30, C:0.21, G:0.20, T:0.29
Consensus pattern (41 bp):
ATAAGTCCTTCGGGTCATCAATAAGCCTTTAGAGCAAGATG
Found at i:136727 original size:41 final size:42
Alignment explanation
Indices: 136624--136730 Score: 117
Period size: 42 Copynumber: 2.6 Consensus size: 42
136614 TTCACAATTT
* * * * * *
136624 ATAAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATGATGG
1 ATAAGTCCTTCGGGACATCTGTAAGCCTTTAGAGCAAGATGG
* * *
136666 TTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT-G
1 ATAAGTCCTTCGGGACATCTGTAAGCCTTTAGAGCAAGATGG
*
136707 ATAAGTCCTTCGGGAAATCTGTAA
1 ATAAGTCCTTCGGGACATCTGTAA
136731 AACCTTCGGA
Statistics
Matches: 53, Mismatches: 12, Indels: 1
0.80 0.18 0.02
Matches are distributed among these distances:
41 21 0.40
42 32 0.60
ACGTcount: A:0.26, C:0.20, G:0.24, T:0.30
Consensus pattern (42 bp):
ATAAGTCCTTCGGGACATCTGTAAGCCTTTAGAGCAAGATGG
Found at i:137791 original size:41 final size:42
Alignment explanation
Indices: 137694--137795 Score: 120
Period size: 42 Copynumber: 2.5 Consensus size: 42
137684 TTCATAATTT
* *
137694 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGC
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCAAGCATGATGC
* * *
137736 TTAAATCCTTCGGGTCATCTGTAAGCCTTT-AGAGCAAT-ATG-
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCA-AGC-ATGATGC
137777 ATAAGTCCTTCGGGTCATC
1 ATAAGTCCTTCGGGTCATC
137796 CATAAAACCT
Statistics
Matches: 51, Mismatches: 7, Indels: 5
0.81 0.11 0.08
Matches are distributed among these distances:
41 18 0.35
42 31 0.61
43 2 0.04
ACGTcount: A:0.25, C:0.23, G:0.21, T:0.31
Consensus pattern (42 bp):
ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCAAGCATGATGC
Found at i:138415 original size:42 final size:41
Alignment explanation
Indices: 138338--138450 Score: 118
Period size: 42 Copynumber: 2.7 Consensus size: 41
138328 TTCACAATTT
* * * *
138338 ATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATG
1 ATAAATCCTTCGGGCCATCAATAAGCCTTTAGAGCAAGATG
* **
138379 ATGAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG
1 AT-AAATCCTTCGGGCCATCAATAAGCCTTTAGAGCAAGATG
* * * *
138421 ATAAGTCCTTCAGGCCATCCATAAGACTTT
1 ATAAATCCTTCGGGCCATCAATAAGCCTTT
138451 CGGGTAGGAT
Statistics
Matches: 58, Mismatches: 13, Indels: 2
0.79 0.18 0.03
Matches are distributed among these distances:
41 24 0.41
42 34 0.59
ACGTcount: A:0.28, C:0.22, G:0.20, T:0.29
Consensus pattern (41 bp):
ATAAATCCTTCGGGCCATCAATAAGCCTTTAGAGCAAGATG
Found at i:138629 original size:42 final size:41
Alignment explanation
Indices: 138550--138653 Score: 118
Period size: 42 Copynumber: 2.5 Consensus size: 41
138540 ATTTCACAAT
* ** * *
138550 TGATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGA
1 TGATAAATCCTTCGGGCCATCAGTAAACCTTTAGAGCAAGA
* * *
138591 TGCTTAAATCCTTCGGGTCATCTGTAAACCTTTAGAGCAAGA
1 TG-ATAAATCCTTCGGGCCATCAGTAAACCTTTAGAGCAAGA
*
138633 TGATAAGTCCTTCGGGCCATC
1 TGATAAATCCTTCGGGCCATC
138654 CATAAAACCT
Statistics
Matches: 51, Mismatches: 11, Indels: 2
0.80 0.17 0.03
Matches are distributed among these distances:
41 18 0.35
42 33 0.65
ACGTcount: A:0.25, C:0.23, G:0.22, T:0.30
Consensus pattern (41 bp):
TGATAAATCCTTCGGGCCATCAGTAAACCTTTAGAGCAAGA
Found at i:140791 original size:41 final size:41
Alignment explanation
Indices: 140688--140794 Score: 117
Period size: 42 Copynumber: 2.6 Consensus size: 41
140678 TTCACAATTT
* * * * *
140688 ATAAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATGATGG
1 ATAAGTCCTTCGGG-CATCTGTAAGCCTTTAGAGCAAGATGG
* *
140730 TTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT-G
1 ATAAGTCCTTCGGG-CATCTGTAAGCCTTTAGAGCAAGATGG
140771 ATAAGTCCTTCGGGCAATCTGTAA
1 ATAAGTCCTTCGGGC-ATCTGTAA
140795 AACCTTCGGA
Statistics
Matches: 54, Mismatches: 10, Indels: 3
0.81 0.15 0.04
Matches are distributed among these distances:
40 1 0.02
41 21 0.39
42 32 0.59
ACGTcount: A:0.25, C:0.21, G:0.24, T:0.30
Consensus pattern (41 bp):
ATAAGTCCTTCGGGCATCTGTAAGCCTTTAGAGCAAGATGG
Found at i:142921 original size:41 final size:41
Alignment explanation
Indices: 142818--142924 Score: 117
Period size: 42 Copynumber: 2.6 Consensus size: 41
142808 TTCACAATTT
* * * * *
142818 ATAAGTCCTTCGGGCTATCAGGAAGTCTTTCGAGCATGATGG
1 ATAAGTCCTTCGGGC-ATCTGTAAGCCTTTAGAGCAAGATGG
* *
142860 TTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT-G
1 ATAAGTCCTTCGGG-CATCTGTAAGCCTTTAGAGCAAGATGG
142901 ATAAGTCCTTCGGGCAATCTGTAA
1 ATAAGTCCTTCGGGC-ATCTGTAA
142925 AACCTTCGGA
Statistics
Matches: 54, Mismatches: 9, Indels: 5
0.79 0.13 0.07
Matches are distributed among these distances:
40 1 0.02
41 21 0.39
42 31 0.57
43 1 0.02
ACGTcount: A:0.25, C:0.20, G:0.24, T:0.31
Consensus pattern (41 bp):
ATAAGTCCTTCGGGCATCTGTAAGCCTTTAGAGCAAGATGG
Found at i:143358 original size:42 final size:39
Alignment explanation
Indices: 143244--143358 Score: 113
Period size: 42 Copynumber: 2.8 Consensus size: 39
143234 TTTCACAATT
* *
143244 TATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAAGA
1 TATAAGTCCTTCGGGCCATCA-TAAGCCTTTAGAGCAAGA
* * * *
143284 TACTTAAATCCTTAGGGTCATCTGTAAGCCTTTAGAGCAAGA
1 TA--TAAGTCCTTCGGGCCATC-ATAAGCCTTTAGAGCAAGA
143326 TGATAAGTCCTTCGGGCCATACATAAGACCTTT
1 T-ATAAGTCCTTCGGGCCAT-CATAAG-CCTTT
143359 GGGTAGGATG
Statistics
Matches: 59, Mismatches: 10, Indels: 10
0.75 0.13 0.13
Matches are distributed among these distances:
40 2 0.03
41 18 0.31
42 38 0.64
43 1 0.02
ACGTcount: A:0.29, C:0.22, G:0.20, T:0.30
Consensus pattern (39 bp):
TATAAGTCCTTCGGGCCATCATAAGCCTTTAGAGCAAGA
Found at i:144400 original size:41 final size:42
Alignment explanation
Indices: 144303--144404 Score: 120
Period size: 42 Copynumber: 2.5 Consensus size: 42
144293 TTCATATTTT
* *
144303 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTGAAGCATGATGC
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTGAAGCATGATGC
* * *
144345 TTAAATCCTTCGGGTCATCTGTAAGCCTTT-AGAGCAAT-ATG-
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTGA-AGC-ATGATGC
144386 ATAAGTCCTTCGGGTCATC
1 ATAAGTCCTTCGGGTCATC
144405 GATAAAACCT
Statistics
Matches: 51, Mismatches: 7, Indels: 5
0.81 0.11 0.08
Matches are distributed among these distances:
41 18 0.35
42 31 0.61
43 2 0.04
ACGTcount: A:0.25, C:0.22, G:0.22, T:0.31
Consensus pattern (42 bp):
ATAAGTCCTTCGGGTCATCAGTAAGCCTTTGAAGCATGATGC
Found at i:145421 original size:42 final size:41
Alignment explanation
Indices: 145355--145452 Score: 115
Period size: 42 Copynumber: 2.4 Consensus size: 41
145345 TTCACAATTT
* * * *
145355 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATG
1 ATAAATCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGATG
* * *
145396 CTTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG
1 -ATAAATCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGATG
*
145438 ATAAGTCCTTCGGGC
1 ATAAATCCTTCGGGC
145453 TATACATAAG
Statistics
Matches: 46, Mismatches: 10, Indels: 1
0.81 0.18 0.02
Matches are distributed among these distances:
41 12 0.26
42 34 0.74
ACGTcount: A:0.24, C:0.22, G:0.23, T:0.30
Consensus pattern (41 bp):
ATAAATCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGATG
Found at i:146128 original size:40 final size:42
Alignment explanation
Indices: 146060--146140 Score: 103
Period size: 40 Copynumber: 2.0 Consensus size: 42
146050 AAATTTCACA
* * *
146060 ATTTATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCAAG
1 ATTTATAAGTCCTTAGGGCCATCAGTAAGCCTTTAGAGCAAG
* *
146102 ATTTA-AA-TCCTTAGGGTCATCTGTAAGCCTTTAGAGCAA
1 ATTTATAAGTCCTTAGGGCCATCAGTAAGCCTTTAGAGCAA
146141 TGATAAGTCC
Statistics
Matches: 34, Mismatches: 5, Indels: 2
0.83 0.12 0.05
Matches are distributed among these distances:
40 27 0.79
41 2 0.06
42 5 0.15
ACGTcount: A:0.28, C:0.20, G:0.20, T:0.32
Consensus pattern (42 bp):
ATTTATAAGTCCTTAGGGCCATCAGTAAGCCTTTAGAGCAAG
Found at i:146356 original size:41 final size:42
Alignment explanation
Indices: 146265--146365 Score: 116
Period size: 41 Copynumber: 2.5 Consensus size: 42
146255 TTTCACAATT
* * *
146265 ATAAGTCCTTC-GGCCATCAGTAAGTCTTTCGAGCATGATGC
1 ATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGATGC
* * * *
146306 TTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG-
1 ATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGATGC
*
146347 ATAAGTCCTTCGAGCCATC
1 ATAAGTCCTTCGGGCCATC
146366 CATAAGACCT
Statistics
Matches: 48, Mismatches: 11, Indels: 2
0.79 0.18 0.03
Matches are distributed among these distances:
41 24 0.50
42 24 0.50
ACGTcount: A:0.26, C:0.24, G:0.21, T:0.30
Consensus pattern (42 bp):
ATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGATGC
Found at i:147435 original size:41 final size:41
Alignment explanation
Indices: 147332--147438 Score: 117
Period size: 42 Copynumber: 2.6 Consensus size: 41
147322 TTCACAATTT
* * * * *
147332 ATAAGTCCTTCGGGCCATCAGGAAGTCTTTCGAGCATGATGG
1 ATAAGTCCTTCGGG-CATCTGTAAGCCTTTAGAGCAAGATGG
* *
147374 TTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGAT-G
1 ATAAGTCCTTCGGG-CATCTGTAAGCCTTTAGAGCAAGATGG
147415 ATAAGTCCTTCGGGCAATCTGTAA
1 ATAAGTCCTTCGGGC-ATCTGTAA
147439 AACCTTCGGA
Statistics
Matches: 54, Mismatches: 10, Indels: 3
0.81 0.15 0.04
Matches are distributed among these distances:
40 1 0.02
41 21 0.39
42 32 0.59
ACGTcount: A:0.25, C:0.21, G:0.24, T:0.30
Consensus pattern (41 bp):
ATAAGTCCTTCGGGCATCTGTAAGCCTTTAGAGCAAGATGG
Found at i:148895 original size:42 final size:41
Alignment explanation
Indices: 148829--148935 Score: 124
Period size: 42 Copynumber: 2.6 Consensus size: 41
148819 TTCAGAATTT
* * * *
148829 ATAAGTCCTTCGGACCATCAGTAAGTCTTTCGAGCATGATGG
1 ATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGAT-G
* * * *
148871 TTAATTCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG
1 ATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGATG
*
148912 ATAAGTCCTTCGGGCCATCCGTAA
1 ATAAGTCCTTCGGGCCATCAGTAA
148936 AACGTTCGGG
Statistics
Matches: 53, Mismatches: 12, Indels: 1
0.80 0.18 0.02
Matches are distributed among these distances:
41 21 0.40
42 32 0.60
ACGTcount: A:0.25, C:0.22, G:0.22, T:0.30
Consensus pattern (41 bp):
ATAAGTCCTTCGGGCCATCAGTAAGCCTTTAGAGCAAGATG
Found at i:149140 original size:41 final size:42
Alignment explanation
Indices: 149043--149144 Score: 120
Period size: 42 Copynumber: 2.5 Consensus size: 42
149033 TTCATAATTT
* *
149043 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTGAAGCATGATGC
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTGAAGCATGATGC
* * *
149085 TTAAATCCTTCGGGTCATCTGTAAGCCTTT-AGAGCAAT-ATG-
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTGA-AGC-ATGATGC
149126 ATAAGTCCTTCGGGTCATC
1 ATAAGTCCTTCGGGTCATC
149145 GATAAAACCT
Statistics
Matches: 51, Mismatches: 7, Indels: 5
0.81 0.11 0.08
Matches are distributed among these distances:
41 18 0.35
42 31 0.61
43 2 0.04
ACGTcount: A:0.25, C:0.22, G:0.22, T:0.31
Consensus pattern (42 bp):
ATAAGTCCTTCGGGTCATCAGTAAGCCTTTGAAGCATGATGC
Found at i:149990 original size:41 final size:42
Alignment explanation
Indices: 149893--149994 Score: 120
Period size: 42 Copynumber: 2.5 Consensus size: 42
149883 TTCATAATTT
* *
149893 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTCAAGCATGATGC
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCAAGCATGATGC
* * *
149935 TTAAATCCTTCGGGTCATCTGTAAGCCTTT-AGAGCAAT-ATG-
1 ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCA-AGC-ATGATGC
149976 ATAAGTCCTTCGGGTCATC
1 ATAAGTCCTTCGGGTCATC
149995 CATAAAACCT
Statistics
Matches: 51, Mismatches: 7, Indels: 5
0.81 0.11 0.08
Matches are distributed among these distances:
41 18 0.35
42 31 0.61
43 2 0.04
ACGTcount: A:0.25, C:0.23, G:0.21, T:0.31
Consensus pattern (42 bp):
ATAAGTCCTTCGGGTCATCAGTAAGCCTTTCAAGCATGATGC
Found at i:150629 original size:214 final size:215
Alignment explanation
Indices: 150043--150674 Score: 1031
Period size: 214 Copynumber: 2.9 Consensus size: 215
150033 TGAAAAAAAT
150043 GGTAGGATGTTTTCACATGAATTTGAAAATGAAAAAAAATGATGTTTTAAGAAGATGAAATTTTT
1 GGTAGGATGTTTTCACATGAATTTGAAAATG--AAAAAATGATGTTTTAAGAAGATGAAATTTTT
*
150108 -AAAATGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAGTAAGTCT
64 GAAAATGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCT
150172 TTCGAGCATGATGCTTAAAT-ACTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCT
129 TTCGAGCATGATGCTTAAATCA-TTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCT
* * *
150236 TCGGGCTATACATAAGACCTTTG
193 TCGGGCCATCCATAAGACCTTCG
* *
150259 GGTAGGATGTCTTCA-ACTGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGGAATTTTTG
1 GGTAGGATGTTTTCACA-TGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGAAATTTTTG
*
150323 AAAATGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAATTCTT
65 AAAATGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCTT
* *
150388 TCGAGCATGATGCTTAAAACCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTC
130 TCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTC
*
150453 GAGCCATCCATAAGACCTTCG
195 GGGCCATCCATAAGACCTTCG
* *
150474 GGTAGGATGTTTTTACATGAATTTGAAAATG-AAAAATGCTGTTTTAAGAAGATGAAATTTTTGA
1 GGTAGGATGTTTTCACATGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGAAATTTTTGA
* *
150538 AAACT-AAGAATGCGATTTTCAAAATTTGACAATTTATAAGTCCTTCGGCCCATCAATAAGTCTT
66 AAA-TGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCTT
* * *
150602 TCGAGCATGATGCTTAAATCATTCGGGTCATATGTAAGTCTTTAAAGCAAGATGATAAGTCCTTC
130 TCGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTC
150667 GGGCCATC
195 GGGCCATC
150675 AGTAAGTCTT
Statistics
Matches: 388, Mismatches: 23, Indels: 12
0.92 0.05 0.03
Matches are distributed among these distances:
214 188 0.48
215 171 0.44
216 29 0.07
ACGTcount: A:0.34, C:0.15, G:0.19, T:0.32
Consensus pattern (215 bp):
GGTAGGATGTTTTCACATGAATTTGAAAATGAAAAAATGATGTTTTAAGAAGATGAAATTTTTGA
AAATGAAGAATGCGATTTTCAAAATTTCACAATTTATAAGTCCTTCGGGCCATCAATAAGTCTTT
CGAGCATGATGCTTAAATCATTCGGGTCATCTGTAAGCCTTTAGAGCAAGATGATAAGTCCTTCG
GGCCATCCATAAGACCTTCG
Found at i:150680 original size:41 final size:42
Alignment explanation
Indices: 150573--150757 Score: 196
Period size: 42 Copynumber: 4.5 Consensus size: 42
150563 TTGACAATTT
* * * *
150573 ATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATGATGC
1 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTAGAGCAAGATGC
* * * * *
150615 TTAAATCATTCGGGTCAT-ATGTAAGTCTTTAAAGCAAGATG-
1 ATAAGTCCTTCGGGCCATCA-GTAAGTCTTTAGAGCAAGATGC
* *
150656 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGC
1 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTAGAGCAAGATGC
* * * * *
150698 TTAAATCCTTCGGGTCATCTGTAAGCCTTTAGAGCAAGATG-
1 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTAGAGCAAGATGC
150739 ATAAGTCCTTCGGGCCATC
1 ATAAGTCCTTCGGGCCATC
150758 CATAAAACCT
Statistics
Matches: 114, Mismatches: 26, Indels: 7
0.78 0.18 0.05
Matches are distributed among these distances:
41 49 0.43
42 65 0.57
ACGTcount: A:0.27, C:0.22, G:0.21, T:0.30
Consensus pattern (42 bp):
ATAAGTCCTTCGGGCCATCAGTAAGTCTTTAGAGCAAGATGC
Found at i:150712 original size:83 final size:83
Alignment explanation
Indices: 150573--150762 Score: 317
Period size: 83 Copynumber: 2.3 Consensus size: 83
150563 TTGACAATTT
*
150573 ATAAGTCCTTCGGCCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATATGTA
1 ATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATATGTA
*
150638 AGTCTTTAAAGCAAGATG
66 AGCCTTTAAAGCAAGATG
* * *
150656 ATAAGTCCTTCGGGCCATCAGTAAGTCTTTCGAGCATGATGCTTAAATCCTTCGGGTCATCTGTA
1 ATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATATGTA
*
150721 AGCCTTTAGAGCAAGATG
66 AGCCTTTAAAGCAAGATG
*
150739 ATAAGTCCTTCGGGCCATCCATAA
1 ATAAGTCCTTCGGGCCATCAATAA
150763 AACCTTCGGG
Statistics
Matches: 99, Mismatches: 8, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
83 99 1.00
ACGTcount: A:0.28, C:0.22, G:0.21, T:0.30
Consensus pattern (83 bp):
ATAAGTCCTTCGGGCCATCAATAAGTCTTTCGAGCATGATGCTTAAATCATTCGGGTCATATGTA
AGCCTTTAAAGCAAGATG
Found at i:151294 original size:14 final size:15
Alignment explanation
Indices: 151277--151342 Score: 73
Period size: 14 Copynumber: 4.4 Consensus size: 15
151267 GGAAATAAAT
151277 ATTA-TATTATAATA
1 ATTATTATTATAATA
*
151291 ATTATTGTATTATAATT
1 ATTA-T-TATTATAATA
151308 ATTATTATTATAA-A
1 ATTATTATTATAATA
* *
151322 ATTATTATTATTATT
1 ATTATTATTATAATA
151337 ATTATT
1 ATTATT
151343 TTACAACGTT
Statistics
Matches: 44, Mismatches: 4, Indels: 7
0.80 0.07 0.13
Matches are distributed among these distances:
14 16 0.36
15 14 0.32
16 1 0.02
17 13 0.30
ACGTcount: A:0.41, C:0.00, G:0.02, T:0.58
Consensus pattern (15 bp):
ATTATTATTATAATA
Found at i:151296 original size:17 final size:17
Alignment explanation
Indices: 151270--151335 Score: 75
Period size: 17 Copynumber: 4.0 Consensus size: 17
151260 TTGTCCAGGA
*
151270 AATAAATATTATATTAT
1 AATAATTATTATATTAT
*
151287 AATAATTATTGTATTAT
1 AATAATTATTATATTAT
*
151304 AATTATTA-T-TATTAT
1 AATAATTATTATATTAT
151319 AA-AATTATTATTATTAT
1 AATAATTATTA-TATTAT
151336 TATTATTTTA
Statistics
Matches: 42, Mismatches: 4, Indels: 6
0.81 0.08 0.12
Matches are distributed among these distances:
14 4 0.10
15 9 0.21
16 1 0.02
17 28 0.67
ACGTcount: A:0.45, C:0.00, G:0.02, T:0.53
Consensus pattern (17 bp):
AATAATTATTATATTAT
Found at i:151311 original size:3 final size:3
Alignment explanation
Indices: 151276--151342 Score: 59
Period size: 3 Copynumber: 23.3 Consensus size: 3
151266 AGGAAATAAA
* * * * *
151276 TAT TA- TAT TAT AAT AAT TAT T-G TAT TAT AAT TAT TAT TAT TA- TAA
1 TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT TAT
*
151321 AAT TAT TAT TAT TAT TAT TAT T
1 TAT TAT TAT TAT TAT TAT TAT T
151343 TTACAACGTT
Statistics
Matches: 52, Mismatches: 9, Indels: 6
0.78 0.13 0.09
Matches are distributed among these distances:
2 5 0.10
3 47 0.90
ACGTcount: A:0.40, C:0.00, G:0.01, T:0.58
Consensus pattern (3 bp):
TAT
Found at i:151317 original size:23 final size:22
Alignment explanation
Indices: 151275--151342 Score: 73
Period size: 23 Copynumber: 3.0 Consensus size: 22
151265 CAGGAAATAA
* *
151275 ATATTATATTATAATAATTATT
1 ATATTATATTATTATTATTATT
* *
151297 GTATTATAATTATTATTATTATA
1 ATATTAT-ATTATTATTATTATT
*
151320 AAATTATTATTATTATTATTATT
1 ATATTA-TATTATTATTATTATT
151343 TTACAACGTT
Statistics
Matches: 37, Mismatches: 7, Indels: 3
0.79 0.15 0.06
Matches are distributed among these distances:
22 6 0.16
23 30 0.81
24 1 0.03
ACGTcount: A:0.41, C:0.00, G:0.01, T:0.57
Consensus pattern (22 bp):
ATATTATATTATTATTATTATT
Found at i:156010 original size:17 final size:17
Alignment explanation
Indices: 155973--156025 Score: 61
Period size: 17 Copynumber: 3.1 Consensus size: 17
155963 TCAATAAAGT
* *
155973 TAGTTCTTTAATTAAAA
1 TAGTTCATTAATTAAAC
* * *
155990 TAGTTTATTCATTTAAC
1 TAGTTCATTAATTAAAC
156007 TAGTTCATTAATTAAAC
1 TAGTTCATTAATTAAAC
156024 TA
1 TA
156026 ACTTTTTAAT
Statistics
Matches: 28, Mismatches: 8, Indels: 0
0.78 0.22 0.00
Matches are distributed among these distances:
17 28 1.00
ACGTcount: A:0.38, C:0.09, G:0.06, T:0.47
Consensus pattern (17 bp):
TAGTTCATTAATTAAAC
Found at i:163047 original size:19 final size:19
Alignment explanation
Indices: 163008--163043 Score: 65
Period size: 19 Copynumber: 1.9 Consensus size: 19
162998 GATAATTAGT
163008 AATAAAAAATAACCTCACA
1 AATAAAAAATAACCTCACA
163027 AATAAAAAA-AACCTCAC
1 AATAAAAAATAACCTCAC
163044 CAAACACTCC
Statistics
Matches: 17, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
18 8 0.47
19 9 0.53
ACGTcount: A:0.64, C:0.22, G:0.00, T:0.14
Consensus pattern (19 bp):
AATAAAAAATAACCTCACA
Found at i:165402 original size:18 final size:18
Alignment explanation
Indices: 165379--165426 Score: 62
Period size: 18 Copynumber: 2.7 Consensus size: 18
165369 TAGTTTGATT
165379 AATGAAATAACA-TTATTC
1 AATGAAATAA-ATTTATTC
*
165397 AATGAACTAAATTTATTC
1 AATGAAATAAATTTATTC
*
165415 AATGAACTAAAT
1 AATGAAATAAAT
165427 GCATGAATGA
Statistics
Matches: 28, Mismatches: 1, Indels: 2
0.90 0.03 0.06
Matches are distributed among these distances:
17 1 0.04
18 27 0.96
ACGTcount: A:0.50, C:0.10, G:0.06, T:0.33
Consensus pattern (18 bp):
AATGAAATAAATTTATTC
Found at i:165500 original size:17 final size:17
Alignment explanation
Indices: 165458--165514 Score: 60
Period size: 17 Copynumber: 3.4 Consensus size: 17
165448 AAACAACTAG
*
165458 ATGCATAAATGAAATAC
1 ATGCTTAAATGAAATAC
* * *
165475 TTCCCTAAATGAAATAC
1 ATGCTTAAATGAAATAC
* *
165492 ATGCTTAAATGCAATGC
1 ATGCTTAAATGAAATAC
165509 ATGCTT
1 ATGCTT
165515 TATTGAACAA
Statistics
Matches: 32, Mismatches: 8, Indels: 0
0.80 0.20 0.00
Matches are distributed among these distances:
17 32 1.00
ACGTcount: A:0.40, C:0.18, G:0.12, T:0.30
Consensus pattern (17 bp):
ATGCTTAAATGAAATAC
Found at i:172425 original size:16 final size:16
Alignment explanation
Indices: 172406--172443 Score: 76
Period size: 16 Copynumber: 2.4 Consensus size: 16
172396 CCAATACTTG
172406 CGAGGGGTGGGTTAGT
1 CGAGGGGTGGGTTAGT
172422 CGAGGGGTGGGTTAGT
1 CGAGGGGTGGGTTAGT
172438 CGAGGG
1 CGAGGG
172444 TATTGTGTCC
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 22 1.00
ACGTcount: A:0.13, C:0.08, G:0.58, T:0.21
Consensus pattern (16 bp):
CGAGGGGTGGGTTAGT
Found at i:188424 original size:20 final size:20
Alignment explanation
Indices: 188395--188432 Score: 67
Period size: 20 Copynumber: 1.9 Consensus size: 20
188385 TTTCAAAGTG
188395 ATGCACCGATGCACCAATCC
1 ATGCACCGATGCACCAATCC
*
188415 ATGCATCGATGCACCAAT
1 ATGCACCGATGCACCAAT
188433 GAATAAATTG
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
20 17 1.00
ACGTcount: A:0.32, C:0.34, G:0.16, T:0.18
Consensus pattern (20 bp):
ATGCACCGATGCACCAATCC
Done.