Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004869.1 Hibiscus syriacus cultivar Beakdansim tig00010977_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69318

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
426--468
18
2.2
20
88
8
63
25
11
0
62
1.29
8102--8237
72
1.9
71
83
4
175
39
19
19
22
1.92
22927--23058
36
3.7
36
85
0
183
30
4
35
29
1.77
22927--23075
72
2.1
72
85
0
199
30
4
36
28
1.76
27568--27636
33
2.1
33
83
5
86
31
1
36
30
1.67
27607--27719
36
3.2
36
91
3
167
27
4
36
31
1.77
32092--32160
33
2.1
33
83
5
86
31
1
36
30
1.67
32146--32242
13
8.0
12
72
22
62
29
3
36
30
1.73
32131--32243
36
3.2
36
89
1
165
28
3
35
32
1.74
34961--35090
36
3.6
36
89
0
197
30
5
36
28
1.79
34972--35107
72
1.9
72
87
0
200
30
5
38
26
1.78
37705--37754
25
2.0
25
84
3
66
4
18
6
72
1.22
38166--38234
33
2.1
33
83
5
86
31
1
36
30
1.67
38220--38280
13
5.0
12
79
20
65
27
1
37
32
1.67
38620--38670
19
2.6
20
87
3
68
45
5
15
33
1.71
40134--40179
23
2.0
23
83
8
58
36
6
8
47
1.60
43428--43462
12
3.0
12
87
4
54
65
8
14
11
1.46
56278--56310
12
2.8
12
86
4
50
66
9
12
12
1.44
67557--67666
35
3.2
35
82
1
123
26
35
4
33
1.77
67812--67850
15
2.5
15
87
4
60
15
25
0
58
1.37
68317--68383
26
2.6
26
97
0
125
25
37
0
37
1.56

Tables:   1

The End!