Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004875.1 Hibiscus syriacus cultivar Beakdansim tig00010988_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53569

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
479--526
18
2.6
18
86
3
60
37
12
25
25
1.91
1009--1293
60
4.8
60
89
2
430
34
14
23
27
1.93
2028--2162
63
2.2
63
82
6
159
37
17
16
28
1.92
3445--3659
60
3.6
60
88
0
304
35
12
22
29
1.91
9623--9660
18
2.1
18
100
0
76
44
15
21
18
1.86
10260--10516
60
4.3
60
81
2
300
36
11
21
31
1.88
10260--10517
120
2.1
121
86
2
360
36
11
20
31
1.88
11107--11177
27
2.6
27
95
0
124
30
21
14
33
1.92
12755--12984
60
3.8
59
84
3
291
36
11
22
29
1.89
15095--15183
27
3.3
27
75
6
90
41
12
3
42
1.59
17987--18065
38
2.1
38
80
4
88
51
2
1
44
1.23
18201--18286
38
2.3
38
89
0
127
43
25
8
23
1.81
18459--18534
38
2.0
38
87
5
109
42
19
7
30
1.80
18545--18604
25
2.4
25
91
0
93
31
8
1
58
1.38
18740--19137
202
2.0
205
86
3
572
36
13
8
41
1.75
20876--20906
2
15.5
2
100
0
62
0
51
0
48
1.00
38973--39040
35
1.9
35
84
3
91
32
22
16
29
1.95
52269--52558
96
3.0
96
91
2
474
31
23
15
29
1.95

Tables:   1

The End!