Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01004877.1 Hibiscus syriacus cultivar Beakdansim tig00010991_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95190

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4552--4590
19
2.1
19
90
9
62
20
15
0
64
1.30
9248--9315
35
1.9
36
93
3
120
29
2
36
30
1.72
11611--11715
36
2.9
36
94
1
176
30
35
4
29
1.78
16617--16684
33
2.1
33
81
15
79
63
0
22
14
1.31
16826--16893
35
1.9
36
87
3
102
30
4
35
29
1.77
17556--17599
15
2.9
15
96
0
79
52
0
27
20
1.47
17741--17841
36
2.8
36
93
1
168
29
3
34
31
1.76
18187--18237
19
2.6
20
87
3
68
45
5
15
33
1.71
20946--20997
15
3.4
15
75
15
52
67
0
17
15
1.24
21625--21710
13
7.2
12
72
22
58
29
3
37
30
1.74
21607--21711
36
2.9
36
95
1
185
28
4
36
30
1.78
23282--23310
12
2.4
12
100
0
58
6
10
41
41
1.66
23860--23886
8
3.4
8
100
0
54
51
0
11
37
1.37
24840--24870
15
2.0
16
93
6
55
58
0
12
29
1.35
24836--24877
16
2.6
16
81
11
50
61
0
11
26
1.30
29104--29169
5
12.6
5
74
25
57
1
16
3
78
0.95
29101--29162
11
5.6
11
75
17
58
1
17
3
77
0.98
29109--29162
19
2.8
19
78
16
58
1
16
3
77
1.00
41536--41580
19
2.3
18
85
14
63
31
15
11
42
1.82
42883--42921
18
2.1
18
85
4
51
69
2
20
7
1.26
47257--47296
20
1.9
20
85
10
53
32
7
32
27
1.85
47506--47541
15
2.4
15
90
0
54
50
5
0
44
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51509--51548
20
1.9
20
85
10
53
32
7
32
27
1.85
51758--51793
15
2.4
15
90
0
54
50
5
0
44
1.25
52460--52501
22
2.0
21
85
4
57
35
33
2
28
1.70
55444--55473
13
2.4
13
94
5
53
26
30
0
43
1.55
73254--73337
25
3.4
25
100
0
168
23
23
0
52
1.47
73267--73337
15
5.4
15
63
30
54
23
23
0
52
1.48
73557--73600
6
7.2
6
82
12
54
79
2
18
0
0.83
76484--76525
22
1.9
22
85
0
57
40
0
16
42
1.48
76461--76631
73
2.4
73
90
4
258
39
8
9
42
1.68
80125--80167
17
2.5
17
88
0
68
39
4
16
39
1.69
81902--81956
23
2.3
25
84
6
78
61
12
16
9
1.55
81950--81978
6
5.0
6
91
8
51
82
0
17
0
0.66
81950--81982
11
3.1
11
91
4
50
81
0
18
0
0.68
81950--81982
17
2.0
16
94
5
57
81
0
18
0
0.68

Tables:   1

The End!